NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | 利用許諾 | ヘルプ
タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
1BX3A-1WV0A
confEVID 1BX3A-1WV0A
pdbIDA 1BX3
pdbIDB 1WV0
pdbChainA A
pdbChainB A
identity 0.984000027179718
indelSize 1
alignment <alignment>
<seq1>ISVRGLAGVENVTELKKNFNRHLHFTLVKDRNVATPRDYYFALAHTVRDHLVGRWIRTQQHYYEKDPKRIYYLSLEFYMGRTLQNTMVNLALENACDEATYQLGLDMEELEEIEEDAGLGNGGLGRLAACFLDSMATLGLAAYGYGIRYEFGIFNQKICGGWQMEEADDWLRYGNPWEKARPEFTLPVHFYGRVEHTSQGAKWVDTQVVLAMPYDTPVPGYRNNVVNTMRLWSAKAP-----------GYIQAVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFKS--NFDAFPDKVAIQLNDTHPSLAIPELMRVLVDLERLDWDKAWEVTVKTCAYTNHTVIPEALERWPVHLLETLLPRHLQIIYEINQRFLNRVAAAFPGDVDRLRRMSLVEEGAVKRINMAHLCIAGSHAVNGVARIHSEILKKTIFKDFYELEPHKFQNKTNGITPRRWLVLCNPGLAEIIAERIGEEYISDLDQLRKLLSYVDDEAFIRDVAKVKQENKLKFAAYLEREYKVHINPNSLFDVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTVMIGGKAAPGYHMAKMIIKLITAIGDVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENFFIFGMRVEDVDRLDQRGYNAQEYYDRIPELRQIIEQLSSGFFSPKQPDLFKDIVNMLMHHDRFKVFADYEEYVKCQERVSALYKNPREWTRMVIRNIATSGKFSSDRTIAQYAREIWGVEPSRQRLP--</seq1>
<seq2>ISVRGLAGVENVTELKKNFNRHLHFTLVKDRNVATPRDYYFALAHTVRDHLVGRWIRTQQHYYEKDPKRIYYLSLEFYMGRTLQNTMVNLALENACDEATYQLGLDMEELEEIEEDAGLGNGGLGRLAACFLDSMATLGLAAYGYGIRYEFGIFNQKICGGWQMEEADDWLRYGNPWEKARPEFTLPVHFYGRVEHTSQGAKWVDTQVVLAMPYDTPVPGYRNNVVNTMRLWSAKAPNDFNLKDFNVGGYIQAVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFKSSTNFDAFPDKVAIQLNDTHPSLAIPELMRVLVDLERLDWDKAWEVTVKTCAYTNHTVIPEALERWPVHLLETLLPRHLQIIYEINQRFLNRVAAAFPGDVDRLRRMSLVEEGAVKRINMAHLCIAGSHAVNGVARIHSEILKKTIFKDFYELEPHKFQNKTNGITPRRWLVLCNPGLAEIIAERIGEEYISDLDQLRKLLSYVDDEAFIRDVAKVKQENKLKFAAYLEREYKVHINPNSLFDVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTVMIGGKAAPGYHMAKMIIKLITAIGDVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENFFIFGMRVEDVDRLDQRGYNAQEYYDRIPELRQIIEQLSSGFFSPKQPDLFKDIVNMLMHHDRFKVFADYEEYVKCQERVSALYKNPREWTRMVIRNIATSGKFSSDRTIAQYAREIWGVEPSRQRLPAP</seq2>
<ss_1> HHHHHHHHHHHHHHHH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EEEEE HHHHH HHHHHHHHHH HHHHGGG EE HHHHHHHHHHHHHHH EEEEEEE EEEEE EEEEEEEE EEEEE EEE EEEEE EEEEEEEEEEEE EEEEEEEEEEE ----------- HHHHGGHHHHGGGG HHHHHHHHHHHHHHHHHHHHHHH -- HHHHEEEE HHHHHHHHHH HHHHHHHHH EEE EEEEEHHHHHH HHHHHHHHHHHHHHHHHHHHH HHHHHHH EEE EEEEEHHHHHH EEEE HHHHHHIIIII HHHHHH IIIII HHHHHHHHHHH GGGG GGGGGGGGGG HHHHHHHHHHHHHHHHHHHHHHHH EEEE HHHHHHHHHHHHHHHHH EEEEEE HHHHHHHHHHHHHHHHGGG GGG EEE HHHHHHHGGG EEEE HHHHHHH EEEE HHHHHHHH GGG HHHHHHHHHH HHHHHHH HHHHHHHHHHH HHHHHHHHH HHHHHHHHHHHHHHHHH HHHHHHHHHGGG GGG HHHHHHHHHH --</ss_1>
<ss_2> HHHHHHHHHHHHHHHH HHHHHHHHHHHHHHHHHHHHHHHHHHHH EEEEE HHHHHHH HHHHHHHHHH HHHHGGG EE HHHHHHHHHHHHHHH EEEEEEE EEEEE EEEEEEEE EEEEE EEEEE EEEEE EEEEEEEEEEEE EEEEEEEEEEE HHHH HHHHHGGG GGG HHHHHHHHHHHHHHHHHHHHHHHH GGG HHHHEEEE HHHHHHHIIIII HHHHHHHHHHHEEE EEEEEHHHHHH HHHHHHHHHHHHHHHHHHHHH HHHHHHH EEE EEEEEHHHHHH EEE HHHHHHIIIII HHHHHH IIIII HHHHHHHHHHH GGGG GGGGGGGGGG HHHHHHHHHHHHHHHHHHHHHHHH EEEE HHHHHHHHHHHHHHHHH EEEEEE HHHHHHHHHHHHHHHHGGG EEEEE HHHHHHHGGG EEEE HHHHHHH EEEE GGHHHHHHHH GGG HHHHHHHHHH HHHHHHH HHHHHHHHHHH HHHHHHHHH HHHHHHHHHHHHHHH HHHHHHHHHGGG GGG HHHHHHHHHH </ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>1BX3</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1BX3A</entryIDChain>
<sequence>RRFKS--NFDAF</sequence>
<secondary-structure>HHHH -- </secondary-structure>
<atom-coordinate>
<line>ATOM 2321 CA ARG A 309 39.734 2.134 51.567 1.00 23.17 C </line>
<line>ATOM 2332 CA ARG A 310 36.980 0.614 49.446 1.00 27.52 C </line>
<line>ATOM 2343 CA PHE A 311 39.613 -1.264 47.480 1.00 26.63 C </line>
<line>ATOM 2354 CA LYS A 312 41.106 -2.768 50.644 1.00 28.03 C </line>
<line>ATOM 2363 CA SER A 313 37.673 -3.963 51.771 1.00 33.02 C </line>
<line>ATOM 2369 CA ASN A 325 46.899 -6.194 46.974 1.00 59.24 C </line>
<line>ATOM 2377 CA PHE A 326 47.920 -3.143 44.923 1.00 40.47 C </line>
<line>ATOM 2388 CA ASP A 327 48.841 -5.176 41.873 1.00 35.50 C </line>
<line>ATOM 2396 CA ALA A 328 45.126 -5.609 41.155 1.00 25.32 C </line>
<line>ATOM 2401 CA PHE A 329 44.273 -1.985 41.886 1.00 19.87 C </line>
</atom-coordinate>
<distance-map>
<line> PHE ALA ASP PHE ASN SER LYS PHE ARG ARG </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>ARG CA 11.46 14.05 15.18 11.79 11.91 6.44 5.17 5.32 3.79 </line>
<line>ARG CA 10.82 13.18 15.22 12.42 12.28 5.18 5.47 3.78 </line>
<line>PHE CA 7.32 9.45 11.48 8.89 8.81 5.43 3.81 </line>
<line>LYS CA 9.35 10.69 11.94 8.91 7.67 3.81 </line>
<line>SER CA 12.05 13.08 14.97 12.35 10.64 </line>
<line>ASN CA 7.11 6.11 5.55 3.82 </line>
<line>PHE CA 4.89 5.30 3.78 </line>
<line>ASP CA 5.57 3.81 </line>
<line>ALA CA 3.79 </line>
<line>PHE CA </line>
</distance-map>
<n14>
<line>ARG CA 321</line>
<line>ARG CA 368</line>
<line>PHE CA 341</line>
<line>LYS CA 255</line>
<line>SER CA 226</line>
<line>ASN CA 213</line>
<line>PHE CA 312</line>
<line>ASP CA 248</line>
<line>ALA CA 259</line>
<line>PHE CA 373</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1WV0</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1WV0A</entryIDChain>
<sequence>RRFKSSTNFDAF</sequence>
<secondary-structure>HHHHH GGG </secondary-structure>
<atom-coordinate>
<line>ATOM 2411 CA ARG A 309 39.812 2.639 52.247 1.00 36.78 C </line>
<line>ATOM 2422 CA ARG A 310 37.184 1.016 50.025 1.00 33.67 C </line>
<line>ATOM 2433 CA PHE A 311 39.922 -0.925 48.231 1.00 34.53 C </line>
<line>ATOM 2444 CA LYS A 312 41.620 -2.099 51.418 1.00 42.68 C </line>
<line>ATOM 2453 CA SER A 313 38.306 -3.787 52.220 1.00 58.71 C </line>
<line>ATOM 2459 CA SER A 314 37.329 -5.359 48.845 1.00 68.96 C </line>
<line>ATOM 2465 CA THR A 324 48.373 -5.271 50.818 1.00 79.27 C </line>
<line>ATOM 2472 CA ASN A 325 49.504 -5.763 47.239 1.00 71.54 C </line>
<line>ATOM 2480 CA PHE A 326 48.583 -2.657 45.313 1.00 56.40 C </line>
<line>ATOM 2491 CA ASP A 327 49.423 -4.540 42.120 1.00 49.97 C </line>
<line>ATOM 2499 CA ALA A 328 45.707 -5.222 41.820 1.00 36.25 C </line>
<line>ATOM 2504 CA PHE A 329 44.791 -1.617 42.520 1.00 28.91 C </line>
</atom-coordinate>
<distance-map>
<line> PHE ALA ASP PHE ASN THR SER SER LYS PHE ARG ARG </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>ARG CA 11.73 14.33 15.70 12.37 13.77 11.74 9.04 6.60 5.14 5.37 3.80 </line>
<line>ARG CA 11.01 13.37 15.59 12.87 14.34 12.86 6.48 5.40 5.60 3.81 </line>
<line>PHE CA 7.54 9.65 11.86 9.30 10.78 9.85 5.17 5.17 3.80 </line>
<line>LYS CA 9.46 10.89 12.38 9.28 9.65 7.48 5.97 3.80 </line>
<line>SER CA 11.87 12.85 15.04 12.43 12.41 10.27 3.85 </line>
<line>SER CA 10.47 10.93 13.86 12.10 12.29 11.22 </line>
<line>THR CA 9.75 9.38 8.79 6.10 3.79 </line>
<line>ASN CA 7.85 6.64 5.26 3.77 </line>
<line>PHE CA 4.82 5.20 3.80 </line>
<line>ASP CA 5.49 3.79 </line>
<line>ALA CA 3.78 </line>
<line>PHE CA </line>
</distance-map>
<n14>
<line>ARG CA 335</line>
<line>ARG CA 389</line>
<line>PHE CA 362</line>
<line>LYS CA 274</line>
<line>SER CA 236</line>
<line>SER CA 272</line>
<line>THR CA 194</line>
<line>ASN CA 230</line>
<line>PHE CA 317</line>
<line>ASP CA 255</line>
<line>ALA CA 271</line>
<line>PHE CA 381</line>
</n14>
</entryChain>
<parallel>
<x>-0.6990000009536743</x>
<y>-0.4560000002384186</y>
<z>-0.5170000195503235</z>
</parallel>
<rotation>
<x>0.9959999918937683</x>
<y>-0.08299999684095383</y>
<z>0.02199999988079071</z>
<x>0.0820000022649765</x>
<y>0.9959999918937683</y>
<z>0.03999999910593033</z>
<x>-0.02500000037252903</x>
<y>-0.03799999877810478</y>
<z>0.9990000128746033</z>
</rotation>
<rmsd>0.7020779848098755</rmsd>
<dmax>1.7025699615478516</dmax>
</indel>