NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | 利用許諾 | ヘルプ
タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
1BXCB-1XLDA
confEVID 1BXCB-1XLDA
pdbIDA 1BXC
pdbIDB 1XLD
pdbChainA B
pdbChainB A
identity 0.512600004673004
indelSize 2
alignment <alignment>
<seq1>MYEPKPEHRFTFGLWTVGNVGRDPFGDAVRERLDPVYVGHKLAELGVHGVNLHDEDLIPRGTPPQERDQIVRRFKRALDETGLKVPMVTGNLFSDPGFKDGGFTSRDPWVRAYAFRKSLETMDLGAELGAEIYVVWPGREGAEVEATGKARKVWDWVREPLNFMAAYAEDQGYGYRFALEPKPNEPRGDIYFATVGSMLALIHTLERPERFGLNPEFAHETMAGLNFVHAVAQALDAGKLLHIDLNGQRMNRFDQDLRFGSENLKAAFLLVDLLES------SGYQGPRHFDAHALRTEDEEGVWAFARGCMRTYLILKERAEAFREDPEVKELLAAYYQEDPAALPLMDPYSHEKAEALKRAE-----LPLEAKRHRGYALERLDQLAVEYLLGVRG</seq1>
<seq2>-VQPTPADHFTFGLWTVGWTGADPFGVATRKNLDPVEAVHKLAELGAYGITFHDNDLIPFDATEAEREKILGDFNQALKDTGLKVPMVTTNLFSHPVFKDGGFTSNDRSIRRFALAKVLHNIDLAAEMGAETFVMWGGREGSEYDGSKDLAAALDRMREGVDTAAGYIKDKGYNLRIALEPKPNEPRGDIFLPTVGHGLAFIEQLEHGDIVGLNPETGHEQMAGLNFTHGIAQALWAEKLFHIDLNGQRGIKYDQDLVFGHGDLTSAFFTVDLLENGFPNGGPKYTGPRHFDYKPSRTDGYDGVWDSAKANMSMYLLLKERALAFRADPEVQEAMKTSG---VFELGETTLNAGESAADLMNDSASFAGFDAEAAAERNFAFIRLNQLAIEHLLGSR-</seq2>
<ss_1> EEEEHHHH HHHHHHHHHH EEEEEHHHH HHHHHHHHHHHHHHH EE HHHHHHHHHHHHHHHHHHH EEEE EEEEEGGG HHHHHHHHHHHHHHHHHHHHH EEEE EEEE HHHHHHHGGG EE HHHHH HHHHHHHHHH HHHHHHHHHHHHH------ EEE HHHHHHHHHHHHHHHHHHHHHHHHGGG HHHHHHHHHH HHHH HHHHHHHHH ----- HHHH HHHHHHHHHHHH </ss_1>
<ss_2>- EEEEHHHH HHHHHHHHHH EEEEEHHHH HHHHHHHHHHHHHHHHHH EE HHHHHHHHHHHHHHHHHHHH EEEEEE EEE GGG HHHHHHHHHHHHHHHHHHHHH EEEE HHHHHHHGGG GGG EE HHHHH HHHHHHHHHH EEEE HHHHHHHHHHHHH EEE HHHHHHHHHHHHHHHHHHHHHHHHHHH HHHHHHHHH --- GGG HHHHHH HHHGGG HHHHHHHHHHHH -</ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>1BXC</pdbID>
<pdbChain>B</pdbChain>
<entryIDChain>1BXCB</entryIDChain>
<sequence>LKRAE-----LPLEA</sequence>
<secondary-structure>HHH ----- HH</secondary-structure>
<atom-coordinate>
<line>ATOM 5926 CA LEU B 354 -27.580-140.166 170.569 1.00 45.90 C </line>
<line>ATOM 5934 CA LYS B 355 -29.074-136.800 169.636 1.00 45.23 C </line>
<line>ATOM 5943 CA ARG B 356 -32.579-138.041 170.434 1.00 42.58 C </line>
<line>ATOM 5954 CA ALA B 357 -31.548-139.996 173.548 1.00 48.36 C </line>
<line>ATOM 5959 CA GLU B 358 -33.074-138.857 176.848 1.00 59.77 C </line>
<line>ATOM 5968 CA LEU B 359 -30.082-138.667 179.187 1.00 31.35 C </line>
<line>ATOM 5976 CA PRO B 360 -30.294-139.077 183.003 1.00 24.28 C </line>
<line>ATOM 5983 CA LEU B 361 -28.546-135.800 183.743 1.00 7.60 C </line>
<line>ATOM 5991 CA GLU B 362 -29.834-134.836 187.167 1.00 22.44 C </line>
<line>ATOM 6000 CA ALA B 363 -28.956-138.301 188.400 1.00 5.29 C </line>
</atom-coordinate>
<distance-map>
<line> ALA GLU LEU PRO LEU GLU ALA ARG LYS LEU </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>LEU CA 17.88 16.75 13.21 12.73 8.97 8.34 4.96 5.00 1.76 </line>
<line>LYS CA 18.76 17.55 14.12 13.42 9.60 8.25 4.63 3.59 </line>
<line>ARG CA 18.33 16.96 13.91 12.78 9.10 6.43 3.28 </line>
<line>ALA CA 15.08 13.73 10.63 9.54 5.83 3.64 </line>
<line>GLU CA 12.26 10.82 8.25 6.75 3.80 </line>
<line>LEU CA 9.28 7.98 4.81 3.82 </line>
<line>PRO CA 5.56 4.19 1.90 </line>
<line>LEU CA 4.68 3.66 </line>
<line>GLU CA 1.51 </line>
<line>ALA CA </line>
</distance-map>
<n14>
<line>LEU CA 206</line>
<line>LYS CA 195</line>
<line>ARG CA 176</line>
<line>ALA CA 188</line>
<line>GLU CA 178</line>
<line>LEU CA 210</line>
<line>PRO CA 193</line>
<line>LEU CA 208</line>
<line>GLU CA 172</line>
<line>ALA CA 179</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1XLD</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1XLDA</entryIDChain>
<sequence>LMNDSASFAGFDAEA</sequence>
<secondary-structure>HHH HHH</secondary-structure>
<atom-coordinate>
<line>ATOM 2736 CA LEU A 357 73.921 70.220 -1.062 1.00 38.48 C </line>
<line>ATOM 2744 CA MET A 358 73.912 68.767 -4.639 1.00 40.25 C </line>
<line>ATOM 2752 CA ASN A 359 77.754 68.868 -4.691 1.00 46.77 C </line>
<line>ATOM 2760 CA ASP A 360 77.919 67.478 -1.065 1.00 46.84 C </line>
<line>ATOM 2768 CA SER A 361 78.992 63.878 -1.846 1.00 46.13 C </line>
<line>ATOM 2774 CA ALA A 362 77.726 62.416 1.399 1.00 44.42 C </line>
<line>ATOM 2779 CA SER A 363 74.188 63.636 0.784 1.00 40.72 C </line>
<line>ATOM 2785 CA PHE A 364 73.785 62.273 -2.752 1.00 37.89 C </line>
<line>ATOM 2796 CA ALA A 365 76.683 60.901 -4.819 1.00 35.21 C </line>
<line>ATOM 2801 CA GLY A 366 77.912 58.438 -2.170 1.00 33.12 C </line>
<line>ATOM 2805 CA PHE A 367 74.758 58.257 -0.051 1.00 31.07 C </line>
<line>ATOM 2816 CA ASP A 368 74.006 54.654 0.822 1.00 29.74 C </line>
<line>ATOM 2824 CA ALA A 369 70.261 54.501 0.062 1.00 29.36 C </line>
<line>ATOM 2829 CA GLU A 370 70.053 50.737 0.690 1.00 30.52 C </line>
<line>ATOM 2838 CA ALA A 371 71.555 51.223 4.192 1.00 29.70 C </line>
</atom-coordinate>
<distance-map>
<line> ALA GLU ALA ASP PHE GLY ALA PHE SER ALA SER ASP ASN MET LEU </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>LEU CA 19.85 19.94 16.18 15.68 12.03 12.49 10.42 8.13 6.84 9.02 8.16 4.85 5.45 3.86 </line>
<line>MET CA 19.78 19.19 15.46 15.13 11.50 11.35 8.34 6.76 7.47 9.56 7.58 5.52 3.84 </line>
<line>ASN CA 20.70 20.42 16.89 15.70 11.96 10.73 8.04 7.94 8.37 8.87 5.88 3.89 </line>
<line>ASP CA 18.23 18.58 15.11 13.54 9.80 9.11 7.67 6.86 5.67 5.63 3.84 </line>
<line>SER CA 15.87 16.09 12.95 10.82 7.26 5.56 4.80 5.52 5.48 3.78 </line>
<line>ALA CA 13.08 13.99 10.96 8.63 5.31 5.35 6.48 5.73 3.79 </line>
<line>SER CA 13.14 13.55 9.97 8.98 5.47 7.04 6.72 3.81 </line>
<line>PHE CA 13.24 12.60 8.99 8.42 4.94 5.66 3.81 </line>
<line>ALA CA 14.18 13.33 10.30 8.83 5.78 3.82 </line>
<line>GLY CA 11.53 11.37 8.89 6.21 3.80 </line>
<line>PHE CA 8.82 8.90 5.86 3.78 </line>
<line>ASP CA 5.40 5.57 3.82 </line>
<line>ALA CA 5.43 3.82 </line>
<line>GLU CA 3.84 </line>
<line>ALA CA </line>
</distance-map>
<n14>
<line>LEU CA 149</line>
<line>MET CA 137</line>
<line>ASN CA 128</line>
<line>ASP CA 141</line>
<line>SER CA 124</line>
<line>ALA CA 140</line>
<line>SER CA 166</line>
<line>PHE CA 147</line>
<line>ALA CA 117</line>
<line>GLY CA 111</line>
<line>PHE CA 127</line>
<line>ASP CA 112</line>
<line>ALA CA 113</line>
<line>GLU CA 100</line>
<line>ALA CA 102</line>
</n14>
</entryChain>
<parallel>
<x>-105.53800201416016</x>
<y>-201.7530059814453</y>
<z>177.42999267578125</z>
</parallel>
<rotation>
<x>-0.9139999747276306</x>
<y>-0.3919999897480011</y>
<z>-0.10000000149011612</z>
<x>0.20800000429153442</x>
<y>-0.24199999868869781</y>
<z>-0.9480000138282776</z>
<x>0.34700000286102295</x>
<y>-0.8870000243186951</y>
<z>0.30300000309944153</z>
</rotation>
<rmsd>1.7598739862442017</rmsd>
<dmax>2.299967050552368</dmax>
</indel>
<indel>
<confEVID></confEVID>
<index>1</index>
<entryChain>
<pdbID>1XLD</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1XLDA</entryIDChain>
<sequence>MKTSG---VFELG</sequence>
<secondary-structure>HHH --- GGG</secondary-structure>
<atom-coordinate>
<line>ATOM 2582 CA MET A 335 58.464 59.170 19.581 1.00 25.73 C </line>
<line>ATOM 2590 CA LYS A 336 62.256 59.623 19.622 1.00 27.39 C </line>
<line>ATOM 2599 CA THR A 337 62.868 56.307 17.825 1.00 25.53 C </line>
<line>ATOM 2606 CA SER A 338 60.327 57.025 15.065 1.00 22.91 C </line>
<line>ATOM 2612 CA GLY A 339 61.968 60.363 14.262 1.00 18.24 C </line>
<line>ATOM 2616 CA VAL A 340 59.053 62.554 15.470 1.00 18.52 C </line>
<line>ATOM 2623 CA PHE A 341 61.634 64.992 16.938 1.00 20.55 C </line>
<line>ATOM 2634 CA GLU A 342 64.084 64.551 13.943 1.00 22.75 C </line>
<line>ATOM 2643 CA LEU A 343 61.366 65.871 11.561 1.00 22.42 C </line>
<line>ATOM 2651 CA GLY A 344 61.691 69.274 13.346 1.00 25.98 C </line>
</atom-coordinate>
<distance-map>
<line> GLY LEU GLU PHE VAL GLY SER THR LYS MET </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>MET CA 12.30 10.85 9.61 7.14 5.36 6.48 5.34 5.54 3.82 </line>
<line>LYS CA 11.53 10.24 7.74 6.03 6.01 5.42 5.59 3.82 </line>
<line>THR CA 13.77 11.53 9.19 8.82 7.69 5.47 3.82 </line>
<line>SER CA 12.44 9.57 8.49 8.29 5.69 3.81 </line>
<line>GLY CA 8.96 6.16 4.70 5.36 3.84 </line>
<line>VAL CA 7.53 5.62 5.62 3.84 </line>
<line>PHE CA 5.59 5.45 3.89 </line>
<line>GLU CA 5.33 3.85 </line>
<line>LEU CA 3.86 </line>
<line>GLY CA </line>
</distance-map>
<n14>
<line>MET CA 312</line>
<line>LYS CA 253</line>
<line>THR CA 225</line>
<line>SER CA 251</line>
<line>GLY CA 226</line>
<line>VAL CA 267</line>
<line>PHE CA 213</line>
<line>GLU CA 186</line>
<line>LEU CA 183</line>
<line>GLY CA 173</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1BXC</pdbID>
<pdbChain>B</pdbChain>
<entryIDChain>1BXCB</entryIDChain>
<sequence>LAAYYQEDPAALP</sequence>
<secondary-structure>HHHH HHHH </secondary-structure>
<atom-coordinate>
<line>ATOM 5730 CA LEU B 329 -13.944-149.803 191.961 1.00 15.16 C </line>
<line>ATOM 5738 CA ALA B 330 -16.900-151.934 190.841 1.00 13.09 C </line>
<line>ATOM 5743 CA ALA B 331 -19.462-149.253 191.636 1.00 31.86 C </line>
<line>ATOM 5748 CA TYR B 332 -17.725-146.451 189.821 1.00 40.91 C </line>
<line>ATOM 5760 CA TYR B 333 -16.690-148.423 186.774 1.00 7.56 C </line>
<line>ATOM 5772 CA GLN B 334 -20.409-149.328 186.666 1.00 21.60 C </line>
<line>ATOM 5781 CA GLU B 335 -21.615-149.324 183.037 1.00 10.81 C </line>
<line>ATOM 5790 CA ASP B 336 -25.247-149.174 181.927 1.00 21.91 C </line>
<line>ATOM 5798 CA PRO B 337 -25.431-151.147 178.638 1.00 18.36 C </line>
<line>ATOM 5805 CA ALA B 338 -28.136-148.776 177.375 1.00 14.06 C </line>
<line>ATOM 5810 CA ALA B 339 -25.465-146.049 177.530 1.00 4.31 C </line>
<line>ATOM 5815 CA LEU B 340 -22.928-148.225 175.767 1.00 16.48 C </line>
<line>ATOM 5823 CA PRO B 341 -24.712-148.634 172.387 1.00 36.53 C </line>
</atom-coordinate>
<distance-map>
<line> PRO LEU ALA ALA PRO ASP GLU GLN TYR TYR ALA ALA LEU </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>LEU CA 22.34 18.52 18.47 20.35 17.59 15.11 11.77 8.36 5.87 4.34 5.53 3.16 </line>
<line>ALA CA 20.04 16.23 15.83 17.54 14.89 12.21 9.12 5.45 4.07 1.31 2.68 </line>
<line>ALA CA 19.95 16.24 15.33 16.69 14.30 11.30 8.86 5.06 5.60 2.51 </line>
<line>TYR CA 18.78 14.99 14.53 16.23 13.58 10.90 7.82 4.14 3.22 </line>
<line>TYR CA 16.47 12.65 12.75 14.81 11.94 9.83 6.18 3.72 </line>
<line>GLN CA 14.91 11.19 10.44 12.08 9.47 6.77 3.82 </line>
<line>GLU CA 11.09 7.39 6.72 8.64 5.82 3.80 </line>
<line>ASP CA 9.55 6.58 4.40 5.39 3.29 </line>
<line>PRO CA 6.29 3.81 1.11 2.99 </line>
<line>ALA CA 6.05 5.45 2.68 </line>
<line>ALA CA 5.20 3.09 </line>
<line>LEU CA 3.82 </line>
<line>PRO CA </line>
</distance-map>
<n14>
<line>LEU CA 297</line>
<line>ALA CA 278</line>
<line>ALA CA 271</line>
<line>TYR CA 281</line>
<line>TYR CA 255</line>
<line>GLN CA 241</line>
<line>GLU CA 242</line>
<line>ASP CA 234</line>
<line>PRO CA 240</line>
<line>ALA CA 214</line>
<line>ALA CA 232</line>
<line>LEU CA 232</line>
<line>PRO CA 218</line>
</n14>
</entryChain>
<parallel>
<x>81.8010025024414</x>
<y>209.55299377441406</y>
<z>-168.98399353027344</z>
</parallel>
<rotation>
<x>-0.8080000281333923</x>
<y>-0.5590000152587891</y>
<z>-0.1860000044107437</z>
<x>0.4269999861717224</x>
<y>-0.33799999952316284</y>
<z>-0.8379999995231628</z>
<x>0.4059999883174896</x>
<y>-0.7570000290870667</y>
<z>0.5120000243186951</z>
</rotation>
<rmsd>5.451844215393066</rmsd>
<dmax>7.34288215637207</dmax>
</indel>