NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | 利用許諾 | ヘルプ
タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
1BXCC-1XLDA
confEVID 1BXCC-1XLDA
pdbIDA 1BXC
pdbIDB 1XLD
pdbChainA C
pdbChainB A
identity 0.512600004673004
indelSize 2
alignment <alignment>
<seq1>MYEPKPEHRFTFGLWTVGNVGRDPFGDAVRERLDPVYVGHKLAELGVHGVNLHDEDLIPRGTPPQERDQIVRRFKRALDETGLKVPMVTGNLFSDPGFKDGGFTSRDPWVRAYAFRKSLETMDLGAELGAEIYVVWPGREGAEVEATGKARKVWDWVREPLNFMAAYAEDQGYGYRFALEPKPNEPRGDIYFATVGSMLALIHTLERPERFGLNPEFAHETMAGLNFVHAVAQALDAGKLLHIDLNGQRMNRFDQDLRFGSENLKAAFLLVDLLES------SGYQGPRHFDAHALRTEDEEGVWAFARGCMRTYLILKERAEAFREDPEVKELLAAYYQEDPAALPLMDPYSHEKAEALKRAE-----LPLEAKRHRGYALERLDQLAVEYLLGVRG</seq1>
<seq2>-VQPTPADHFTFGLWTVGWTGADPFGVATRKNLDPVEAVHKLAELGAYGITFHDNDLIPFDATEAEREKILGDFNQALKDTGLKVPMVTTNLFSHPVFKDGGFTSNDRSIRRFALAKVLHNIDLAAEMGAETFVMWGGREGSEYDGSKDLAAALDRMREGVDTAAGYIKDKGYNLRIALEPKPNEPRGDIFLPTVGHGLAFIEQLEHGDIVGLNPETGHEQMAGLNFTHGIAQALWAEKLFHIDLNGQRGIKYDQDLVFGHGDLTSAFFTVDLLENGFPNGGPKYTGPRHFDYKPSRTDGYDGVWDSAKANMSMYLLLKERALAFRADPEVQEAMKTSG---VFELGETTLNAGESAADLMNDSASFAGFDAEAAAERNFAFIRLNQLAIEHLLGSR-</seq2>
<ss_1> EEEEHHHH HHHHHHHHHH EEEEEHHHH HHHHHHHHHHHHHHH EE HHHHHHHHHHHHHHHHHHH EEEE EEEEEGGG HHHHHHHHHHHHHHHHHHHHH EEEE EEEE HHHHHHHGGG EE HHHHH HHHHHHHHHH HHHHHHHHHHHHH------ EEE HHHHHHHHHHHHHHHHHHHHHHHHHH HHHHHHHHHH HHHH HHHHHHHHH ----- HHHH HHHHHHHHHHHH </ss_1>
<ss_2>- EEEEHHHH HHHHHHHHHH EEEEEHHHH HHHHHHHHHHHHHHHHHH EE HHHHHHHHHHHHHHHHHHHH EEEEEE EEE GGG HHHHHHHHHHHHHHHHHHHHH EEEE HHHHHHHGGG GGG EE HHHHH HHHHHHHHHH EEEE HHHHHHHHHHHHH EEE HHHHHHHHHHHHHHHHHHHHHHHHHHH HHHHHHHHH --- GGG HHHHHH HHHGGG HHHHHHHHHHHH -</ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>1BXC</pdbID>
<pdbChain>C</pdbChain>
<entryIDChain>1BXCC</entryIDChain>
<sequence>LKRAE-----LPLEA</sequence>
<secondary-structure>HHH ----- HH</secondary-structure>
<atom-coordinate>
<line>ATOM 9027 CA LEU C 354 40.289-120.663 217.572 1.00 17.69 C </line>
<line>ATOM 9035 CA LYS C 355 42.728-119.127 215.110 1.00 42.68 C </line>
<line>ATOM 9044 CA ARG C 356 45.606-121.133 216.582 1.00 23.68 C </line>
<line>ATOM 9055 CA ALA C 357 43.568-124.331 217.066 1.00 13.43 C </line>
<line>ATOM 9060 CA GLU C 358 44.740-127.378 215.101 1.00 35.13 C </line>
<line>ATOM 9069 CA LEU C 359 41.524-128.694 213.541 1.00 20.74 C </line>
<line>ATOM 9077 CA PRO C 360 40.965-132.375 212.567 1.00 32.40 C </line>
<line>ATOM 9084 CA LEU C 361 40.028-131.573 208.967 1.00 17.52 C </line>
<line>ATOM 9092 CA GLU C 362 40.872-134.758 207.081 1.00 7.82 C </line>
<line>ATOM 9101 CA ALA C 363 38.915-136.756 209.642 1.00 11.48 C </line>
</atom-coordinate>
<distance-map>
<line> ALA GLU LEU PRO LEU GLU ALA ARG LYS LEU </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>LEU CA 8.05 10.51 8.61 5.05 4.22 5.09 3.32 5.41 3.47 </line>
<line>LYS CA 6.67 8.24 6.71 3.09 1.98 2.01 2.13 3.23 </line>
<line>ARG CA 9.64 10.62 9.44 6.14 5.09 1.72 2.09 </line>
<line>ALA CA 8.76 10.34 8.84 5.20 4.07 2.29 </line>
<line>GLU CA 7.98 8.90 7.73 4.55 3.57 </line>
<line>LEU CA 4.69 6.49 4.81 1.12 </line>
<line>PRO CA 3.57 5.49 3.72 </line>
<line>LEU CA 1.30 2.07 </line>
<line>GLU CA 3.22 </line>
<line>ALA CA </line>
</distance-map>
<n14>
<line>LEU CA 276</line>
<line>LYS CA 251</line>
<line>ARG CA 202</line>
<line>ALA CA 236</line>
<line>GLU CA 216</line>
<line>LEU CA 259</line>
<line>PRO CA 254</line>
<line>LEU CA 201</line>
<line>GLU CA 159</line>
<line>ALA CA 229</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1XLD</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1XLDA</entryIDChain>
<sequence>LMNDSASFAGFDAEA</sequence>
<secondary-structure>HHH HHH</secondary-structure>
<atom-coordinate>
<line>ATOM 2736 CA LEU A 357 73.921 70.220 -1.062 1.00 38.48 C </line>
<line>ATOM 2744 CA MET A 358 73.912 68.767 -4.639 1.00 40.25 C </line>
<line>ATOM 2752 CA ASN A 359 77.754 68.868 -4.691 1.00 46.77 C </line>
<line>ATOM 2760 CA ASP A 360 77.919 67.478 -1.065 1.00 46.84 C </line>
<line>ATOM 2768 CA SER A 361 78.992 63.878 -1.846 1.00 46.13 C </line>
<line>ATOM 2774 CA ALA A 362 77.726 62.416 1.399 1.00 44.42 C </line>
<line>ATOM 2779 CA SER A 363 74.188 63.636 0.784 1.00 40.72 C </line>
<line>ATOM 2785 CA PHE A 364 73.785 62.273 -2.752 1.00 37.89 C </line>
<line>ATOM 2796 CA ALA A 365 76.683 60.901 -4.819 1.00 35.21 C </line>
<line>ATOM 2801 CA GLY A 366 77.912 58.438 -2.170 1.00 33.12 C </line>
<line>ATOM 2805 CA PHE A 367 74.758 58.257 -0.051 1.00 31.07 C </line>
<line>ATOM 2816 CA ASP A 368 74.006 54.654 0.822 1.00 29.74 C </line>
<line>ATOM 2824 CA ALA A 369 70.261 54.501 0.062 1.00 29.36 C </line>
<line>ATOM 2829 CA GLU A 370 70.053 50.737 0.690 1.00 30.52 C </line>
<line>ATOM 2838 CA ALA A 371 71.555 51.223 4.192 1.00 29.70 C </line>
</atom-coordinate>
<distance-map>
<line> ALA GLU ALA ASP PHE GLY ALA PHE SER ALA SER ASP ASN MET LEU </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>LEU CA 19.85 19.94 16.18 15.68 12.03 12.49 10.42 8.13 6.84 9.02 8.16 4.85 5.45 3.86 </line>
<line>MET CA 19.78 19.19 15.46 15.13 11.50 11.35 8.34 6.76 7.47 9.56 7.58 5.52 3.84 </line>
<line>ASN CA 20.70 20.42 16.89 15.70 11.96 10.73 8.04 7.94 8.37 8.87 5.88 3.89 </line>
<line>ASP CA 18.23 18.58 15.11 13.54 9.80 9.11 7.67 6.86 5.67 5.63 3.84 </line>
<line>SER CA 15.87 16.09 12.95 10.82 7.26 5.56 4.80 5.52 5.48 3.78 </line>
<line>ALA CA 13.08 13.99 10.96 8.63 5.31 5.35 6.48 5.73 3.79 </line>
<line>SER CA 13.14 13.55 9.97 8.98 5.47 7.04 6.72 3.81 </line>
<line>PHE CA 13.24 12.60 8.99 8.42 4.94 5.66 3.81 </line>
<line>ALA CA 14.18 13.33 10.30 8.83 5.78 3.82 </line>
<line>GLY CA 11.53 11.37 8.89 6.21 3.80 </line>
<line>PHE CA 8.82 8.90 5.86 3.78 </line>
<line>ASP CA 5.40 5.57 3.82 </line>
<line>ALA CA 5.43 3.82 </line>
<line>GLU CA 3.84 </line>
<line>ALA CA </line>
</distance-map>
<n14>
<line>LEU CA 149</line>
<line>MET CA 137</line>
<line>ASN CA 128</line>
<line>ASP CA 141</line>
<line>SER CA 124</line>
<line>ALA CA 140</line>
<line>SER CA 166</line>
<line>PHE CA 147</line>
<line>ALA CA 117</line>
<line>GLY CA 111</line>
<line>PHE CA 127</line>
<line>ASP CA 112</line>
<line>ALA CA 113</line>
<line>GLU CA 100</line>
<line>ALA CA 102</line>
</n14>
</entryChain>
<parallel>
<x>-32.75899887084961</x>
<y>-188.98699951171875</y>
<z>216.1219940185547</z>
</parallel>
<rotation>
<x>0.7839999794960022</x>
<y>-0.2630000114440918</y>
<z>0.5619999766349792</z>
<x>-0.09399999678134918</x>
<y>0.843999981880188</y>
<z>0.527999997138977</z>
<x>-0.6129999756813049</x>
<y>-0.46700000762939453</y>
<z>0.6370000243186951</z>
</rotation>
<rmsd>1.763867974281311</rmsd>
<dmax>2.2962839603424072</dmax>
</indel>
<indel>
<confEVID></confEVID>
<index>1</index>
<entryChain>
<pdbID>1XLD</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1XLDA</entryIDChain>
<sequence>MKTSG---VFELG</sequence>
<secondary-structure>HHH --- GGG</secondary-structure>
<atom-coordinate>
<line>ATOM 2582 CA MET A 335 58.464 59.170 19.581 1.00 25.73 C </line>
<line>ATOM 2590 CA LYS A 336 62.256 59.623 19.622 1.00 27.39 C </line>
<line>ATOM 2599 CA THR A 337 62.868 56.307 17.825 1.00 25.53 C </line>
<line>ATOM 2606 CA SER A 338 60.327 57.025 15.065 1.00 22.91 C </line>
<line>ATOM 2612 CA GLY A 339 61.968 60.363 14.262 1.00 18.24 C </line>
<line>ATOM 2616 CA VAL A 340 59.053 62.554 15.470 1.00 18.52 C </line>
<line>ATOM 2623 CA PHE A 341 61.634 64.992 16.938 1.00 20.55 C </line>
<line>ATOM 2634 CA GLU A 342 64.084 64.551 13.943 1.00 22.75 C </line>
<line>ATOM 2643 CA LEU A 343 61.366 65.871 11.561 1.00 22.42 C </line>
<line>ATOM 2651 CA GLY A 344 61.691 69.274 13.346 1.00 25.98 C </line>
</atom-coordinate>
<distance-map>
<line> GLY LEU GLU PHE VAL GLY SER THR LYS MET </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>MET CA 12.30 10.85 9.61 7.14 5.36 6.48 5.34 5.54 3.82 </line>
<line>LYS CA 11.53 10.24 7.74 6.03 6.01 5.42 5.59 3.82 </line>
<line>THR CA 13.77 11.53 9.19 8.82 7.69 5.47 3.82 </line>
<line>SER CA 12.44 9.57 8.49 8.29 5.69 3.81 </line>
<line>GLY CA 8.96 6.16 4.70 5.36 3.84 </line>
<line>VAL CA 7.53 5.62 5.62 3.84 </line>
<line>PHE CA 5.59 5.45 3.89 </line>
<line>GLU CA 5.33 3.85 </line>
<line>LEU CA 3.86 </line>
<line>GLY CA </line>
</distance-map>
<n14>
<line>MET CA 312</line>
<line>LYS CA 253</line>
<line>THR CA 225</line>
<line>SER CA 251</line>
<line>GLY CA 226</line>
<line>VAL CA 267</line>
<line>PHE CA 213</line>
<line>GLU CA 186</line>
<line>LEU CA 183</line>
<line>GLY CA 173</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1BXC</pdbID>
<pdbChain>C</pdbChain>
<entryIDChain>1BXCC</entryIDChain>
<sequence>LAAYYQEDPAALP</sequence>
<secondary-structure>HHHH HHHH </secondary-structure>
<atom-coordinate>
<line>ATOM 8831 CA LEU C 329 21.088-139.764 216.139 1.00 12.40 C </line>
<line>ATOM 8839 CA ALA C 330 23.542-140.129 219.035 1.00 17.88 C </line>
<line>ATOM 8844 CA ALA C 331 26.521-140.710 216.780 1.00 10.99 C </line>
<line>ATOM 8849 CA TYR C 332 25.901-137.737 214.581 1.00 32.69 C </line>
<line>ATOM 8861 CA TYR C 333 24.955-135.285 217.270 1.00 3.59 C </line>
<line>ATOM 8873 CA GLN C 334 28.282-136.412 218.816 1.00 24.43 C </line>
<line>ATOM 8882 CA GLU C 335 30.056-133.397 220.363 1.00 12.60 C </line>
<line>ATOM 8891 CA ASP C 336 33.748-133.264 221.300 1.00 2.64 C </line>
<line>ATOM 8899 CA PRO C 337 33.987-130.912 224.316 1.00 19.85 C </line>
<line>ATOM 8906 CA ALA C 338 37.384-129.720 223.081 1.00 18.53 C </line>
<line>ATOM 8911 CA ALA C 339 35.528-128.327 220.051 1.00 21.64 C </line>
<line>ATOM 8916 CA LEU C 340 32.843-126.732 222.215 1.00 12.78 C </line>
<line>ATOM 8924 CA PRO C 341 35.038-124.234 224.144 1.00 40.83 C </line>
</atom-coordinate>
<distance-map>
<line> PRO LEU ALA ALA PRO ASP GLU GLN TYR TYR ALA ALA LEU </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>LEU CA 16.08 13.23 14.96 17.71 15.27 13.67 9.91 7.68 4.03 5.06 5.47 3.80 </line>
<line>ALA CA 12.58 9.83 12.03 14.42 11.70 10.45 6.65 4.75 2.26 5.04 3.74 </line>
<line>ALA CA 11.26 8.34 9.58 12.56 10.61 8.52 5.03 2.69 1.64 2.28 </line>
<line>TYR CA 13.23 10.32 11.07 14.29 12.66 10.33 7.12 4.86 2.85 </line>
<line>TYR CA 12.20 9.31 10.93 13.72 11.46 9.67 5.97 3.67 </line>
<line>GLN CA 8.60 5.69 7.35 10.05 7.92 6.00 2.35 </line>
<line>GLU CA 6.25 3.35 5.48 7.82 5.57 3.81 </line>
<line>ASP CA 3.12 1.29 2.17 4.05 3.03 </line>
<line>PRO CA 1.06 2.39 4.53 3.61 </line>
<line>ALA CA 2.58 4.62 3.55 </line>
<line>ALA CA 4.12 3.45 </line>
<line>LEU CA 2.92 </line>
<line>PRO CA </line>
</distance-map>
<n14>
<line>LEU CA 396</line>
<line>ALA CA 319</line>
<line>ALA CA 319</line>
<line>TYR CA 331</line>
<line>TYR CA 317</line>
<line>GLN CA 313</line>
<line>GLU CA 307</line>
<line>ASP CA 282</line>
<line>PRO CA 238</line>
<line>ALA CA 238</line>
<line>ALA CA 287</line>
<line>LEU CA 272</line>
<line>PRO CA 237</line>
</n14>
</entryChain>
<parallel>
<x>32.71799850463867</x>
<y>195.89599609375</y>
<z>-202.3179931640625</z>
</parallel>
<rotation>
<x>0.8059999942779541</x>
<y>0.578000009059906</y>
<z>-0.1289999932050705</z>
<x>-0.4429999887943268</x>
<y>0.4440000057220459</y>
<z>-0.7789999842643738</z>
<x>-0.3930000066757202</x>
<y>0.6850000023841858</y>
<z>0.6140000224113464</z>
</rotation>
<rmsd>5.44980001449585</rmsd>
<dmax>7.329493045806885</dmax>
</indel>