NBDC - アーカイブトップ - ヘルプ
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タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
1C10A-2EQLA
confEVID 1C10A-2EQLA
pdbIDA 1C10
pdbIDB 2EQL
pdbChainA A
pdbChainB A
identity 0.484600007534027
indelSize 2
alignment <alignment>
<seq1>KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNT-DGSTDYGILQINSRWWCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDVQAWIRGCRL</seq1>
<seq2>KVFSKCELAHKLKAQEMDGFGGYSLANWVCMAEYESNFNTRAFNGKNANGSSDYGLFQLNNKWWCKDNK-RSSSNACNIMCSKLLDENIDDDISCAKRVVRDPKGMSAWKAWVKHCKDKDLSEYLASCNL</seq2>
<ss_1> HHHHHHHHHH GGG HHHHHHHHHH EEEEE - EEEEE EE GGGG HHHHHHHHHHH GGGG HHHHH GGGGG </ss_1>
<ss_2> HHHHHHHHH GGG HHHHHHHHHH EEEEE EEEEE EEEHHHEE - EEGGGG HHHHHHHHHH GGGG HHHHH </ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>1C10</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1C10A</entryIDChain>
<sequence>TNRNT-DGSTD</sequence>
<secondary-structure>EEEE - EEE</secondary-structure>
<atom-coordinate>
<line>ATOM 333 CA THR A 43 10.648 15.826 17.603 1.00 10.99 C </line>
<line>ATOM 340 CA ASN A 44 12.700 18.809 18.762 1.00 22.97 C </line>
<line>ATOM 348 CA ARG A 45 15.049 18.883 21.735 1.00 16.84 C </line>
<line>ATOM 359 CA ASN A 46 14.881 21.924 23.948 1.00 26.42 C </line>
<line>ATOM 367 CA THR A 47 17.829 23.590 25.627 1.00 31.92 C </line>
<line>ATOM 374 CA ASP A 48 16.628 22.573 29.058 1.00 10.28 C </line>
<line>ATOM 382 CA GLY A 49 16.981 18.956 28.009 1.00 18.84 C </line>
<line>ATOM 386 CA SER A 50 13.230 18.600 27.512 1.00 12.53 C </line>
<line>ATOM 392 CA THR A 51 11.844 17.490 24.134 1.00 9.96 C </line>
<line>ATOM 399 CA ASP A 52 8.789 18.442 22.046 1.00 6.46 C </line>
</atom-coordinate>
<distance-map>
<line> ASP THR SER GLY ASP THR ASN ARG ASN THR </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>THR CA 5.48 6.84 10.61 12.58 14.58 13.28 9.77 6.77 3.80 </line>
<line>ASN CA 5.12 5.60 8.77 10.19 11.64 9.81 6.43 3.79 </line>
<line>ARG CA 6.28 4.24 6.06 6.57 8.35 6.71 3.76 </line>
<line>ASN CA 7.27 5.38 5.15 5.45 5.44 3.78 </line>
<line>THR CA 11.00 8.68 7.04 5.28 3.77 </line>
<line>ASP CA 11.30 8.54 5.45 3.78 </line>
<line>GLY CA 10.15 6.60 3.80 </line>
<line>SER CA 7.04 3.82 </line>
<line>THR CA 3.82 </line>
<line>ASP CA </line>
</distance-map>
<n14>
<line>THR CA 298</line>
<line>ASN CA 283</line>
<line>ARG CA 229</line>
<line>ASN CA 218</line>
<line>THR CA 145</line>
<line>ASP CA 163</line>
<line>GLY CA 193</line>
<line>SER CA 258</line>
<line>THR CA 320</line>
<line>ASP CA 411</line>
</n14>
</entryChain>
<entryChain>
<pdbID>2EQL</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>2EQLA</entryIDChain>
<sequence>FNGKNANGSSD</sequence>
<secondary-structure>EEEE EEE</secondary-structure>
<atom-coordinate>
<line>ATOM 335 CA PHE A 43 25.234 8.318 23.711 1.00 14.36 C </line>
<line>ATOM 346 CA ASN A 44 22.283 7.911 26.048 1.00 16.73 C </line>
<line>ATOM 354 CA GLY A 45 22.429 9.093 29.616 1.00 23.71 C </line>
<line>ATOM 358 CA LYS A 46 19.671 8.472 32.130 1.00 25.81 C </line>
<line>ATOM 367 CA ASN A 47 20.123 9.524 35.869 1.00 25.39 C </line>
<line>ATOM 375 CA ALA A 48 18.097 6.843 37.771 1.00 31.18 C </line>
<line>ATOM 380 CA ASN A 49 21.584 6.481 39.115 1.00 22.87 C </line>
<line>ATOM 388 CA GLY A 50 24.540 7.958 36.880 1.00 19.24 C </line>
<line>ATOM 392 CA SER A 51 24.171 5.304 34.091 1.00 12.25 C </line>
<line>ATOM 398 CA SER A 52 24.954 6.028 30.456 1.00 5.93 C </line>
<line>ATOM 404 CA ASP A 53 25.349 4.034 27.258 1.00 7.84 C </line>
</atom-coordinate>
<distance-map>
<line> ASP SER SER GLY ASN ALA ASN LYS GLY ASN PHE </line>
<line> CA CA CA CA CA CA CA CA CA CA CA </line>
<line>PHE CA 5.56 7.13 10.86 13.19 15.94 15.84 13.24 10.09 6.58 3.79 </line>
<line>ASN CA 5.09 5.49 8.66 11.06 13.16 12.49 10.18 6.64 3.76 </line>
<line>GLY CA 6.30 4.06 6.12 7.65 9.89 9.50 6.68 3.78 </line>
<line>LYS CA 8.70 6.06 5.84 6.82 7.51 6.08 3.91 </line>
<line>ASN CA 11.47 8.05 6.11 4.79 4.68 3.86 </line>
<line>ALA CA 13.08 10.06 7.27 6.60 3.75 </line>
<line>ASN CA 12.68 9.30 5.77 3.99 </line>
<line>GLY CA 10.42 6.72 3.87 </line>
<line>SER CA 7.05 3.79 </line>
<line>SER CA 3.79 </line>
<line>ASP CA </line>
</distance-map>
<n14>
<line>PHE CA 294</line>
<line>ASN CA 266</line>
<line>GLY CA 223</line>
<line>LYS CA 163</line>
<line>ASN CA 140</line>
<line>ALA CA 115</line>
<line>ASN CA 143</line>
<line>GLY CA 191</line>
<line>SER CA 245</line>
<line>SER CA 306</line>
<line>ASP CA 405</line>
</n14>
</entryChain>
<parallel>
<x>-7.761000156402588</x>
<y>12.01200008392334</y>
<z>-8.151000022888184</z>
</parallel>
<rotation>
<x>0.03400000184774399</x>
<y>-0.968999981880188</y>
<z>0.2460000067949295</z>
<x>0.8759999871253967</x>
<y>-0.09000000357627869</y>
<z>-0.4740000069141388</z>
<x>0.48100000619888306</x>
<y>0.23199999332427979</y>
<z>0.8450000286102295</z>
</rotation>
<rmsd>0.8691049814224243</rmsd>
<dmax>1.2880990505218506</dmax>
</indel>
<indel>
<confEVID></confEVID>
<index>1</index>
<entryChain>
<pdbID>2EQL</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>2EQLA</entryIDChain>
<sequence>CKDNK-RSSSN</sequence>
<secondary-structure>EE - </secondary-structure>
<atom-coordinate>
<line>ATOM 517 CA CYS A 65 33.837 0.962 30.984 1.00 8.99 C </line>
<line>ATOM 523 CA LYS A 66 35.347 3.543 33.176 1.00 2.80 C </line>
<line>ATOM 532 CA ASP A 67 34.269 7.204 32.977 1.00 6.96 C </line>
<line>ATOM 540 CA ASN A 68 33.884 9.791 35.867 1.00 10.72 C </line>
<line>ATOM 548 CA LYS A 69 30.325 9.001 37.028 1.00 10.59 C </line>
<line>ATOM 557 CA ARG A 70 29.489 6.742 40.046 1.00 29.32 C </line>
<line>ATOM 568 CA SER A 71 27.965 3.997 38.060 1.00 22.73 C </line>
<line>ATOM 574 CA SER A 72 31.095 3.191 35.998 1.00 15.77 C </line>
<line>ATOM 580 CA SER A 73 33.191 -0.064 36.418 1.00 15.22 C </line>
<line>ATOM 586 CA ASN A 74 35.780 -1.456 33.971 1.00 5.05 C </line>
</atom-coordinate>
<distance-map>
<line> ASN SER SER SER ARG LYS ASN ASP LYS CYS </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>CYS CA 4.31 5.57 6.13 9.68 11.59 10.65 10.09 6.57 3.71 </line>
<line>LYS CA 5.08 5.31 5.12 8.86 9.58 8.36 6.96 3.82 </line>
<line>ASP CA 8.85 8.11 5.94 8.71 8.55 5.93 3.90 </line>
<line>ASN CA 11.56 9.89 7.17 8.57 6.79 3.83 </line>
<line>LYS CA 12.18 9.53 5.95 5.63 3.86 </line>
<line>ARG CA 11.99 8.56 5.62 3.72 </line>
<line>SER CA 10.37 6.82 3.83 </line>
<line>SER CA 6.90 3.89 </line>
<line>SER CA 3.82 </line>
<line>ASN CA </line>
</distance-map>
<n14>
<line>CYS CA 351</line>
<line>LYS CA 277</line>
<line>ASP CA 265</line>
<line>ASN CA 201</line>
<line>LYS CA 212</line>
<line>ARG CA 181</line>
<line>SER CA 227</line>
<line>SER CA 275</line>
<line>SER CA 257</line>
<line>ASN CA 273</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1C10</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1C10A</entryIDChain>
<sequence>CNDGRTPGSRN</sequence>
<secondary-structure> </secondary-structure>
<atom-coordinate>
<line>ATOM 509 CA CYS A 64 4.425 13.388 28.765 1.00 17.08 C </line>
<line>ATOM 515 CA ASN A 65 7.029 10.957 30.064 1.00 11.66 C </line>
<line>ATOM 523 CA ASP A 66 10.055 10.264 27.901 1.00 11.12 C </line>
<line>ATOM 531 CA GLY A 67 12.291 8.869 30.606 1.00 22.28 C </line>
<line>ATOM 535 CA ARG A 68 14.980 11.469 29.941 1.00 23.24 C </line>
<line>ATOM 546 CA THR A 69 13.548 14.726 31.312 1.00 24.22 C </line>
<line>ATOM 553 CA PRO A 70 14.605 14.711 34.958 1.00 36.07 C </line>
<line>ATOM 560 CA GLY A 71 12.101 16.147 37.424 1.00 44.64 C </line>
<line>ATOM 564 CA SER A 72 9.571 16.477 34.636 1.00 36.37 C </line>
<line>ATOM 570 CA ARG A 73 5.872 15.983 35.104 1.00 23.43 C </line>
<line>ATOM 581 CA ASN A 74 3.564 13.827 33.035 1.00 17.08 C </line>
</atom-coordinate>
<distance-map>
<line> ASN ARG SER GLY PRO THR ARG GLY ASP ASN CYS </line>
<line> CA CA CA CA CA CA CA CA CA CA CA </line>
<line>CYS CA 4.38 7.00 8.40 11.90 11.99 9.57 10.79 9.26 6.50 3.79 </line>
<line>ASN CA 5.39 7.21 7.60 10.34 9.77 7.63 7.97 5.69 3.78 </line>
<line>ASP CA 9.01 10.10 9.18 11.38 9.50 6.61 5.47 3.78 </line>
<line>GLY CA 10.33 10.59 9.03 9.97 7.64 6.03 3.80 </line>
<line>ARG CA 12.06 11.40 8.74 9.28 5.99 3.81 </line>
<line>THR CA 10.17 8.65 5.47 6.44 3.80 </line>
<line>PRO CA 11.24 8.83 5.34 3.80 </line>
<line>GLY CA 9.88 6.65 3.78 </line>
<line>SER CA 6.76 3.76 </line>
<line>ARG CA 3.78 </line>
<line>ASN CA </line>
</distance-map>
<n14>
<line>CYS CA 363</line>
<line>ASN CA 282</line>
<line>ASP CA 289</line>
<line>GLY CA 201</line>
<line>ARG CA 210</line>
<line>THR CA 238</line>
<line>PRO CA 178</line>
<line>GLY CA 161</line>
<line>SER CA 236</line>
<line>ARG CA 240</line>
<line>ASN CA 280</line>
</n14>
</entryChain>
<parallel>
<x>21.393999099731445</x>
<y>-7.230999946594238</y>
<z>3.7300000190734863</z>
</parallel>
<rotation>
<x>-0.4729999899864197</x>
<y>0.8019999861717224</y>
<z>0.36399999260902405</z>
<x>-0.8799999952316284</x>
<y>-0.41200000047683716</y>
<z>-0.2370000034570694</z>
<x>-0.03999999910593033</x>
<y>-0.4320000112056732</y>
<z>0.9010000228881836</z>
</rotation>
<rmsd>1.673449993133545</rmsd>
<dmax>2.526489019393921</dmax>
</indel>