NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | 利用許諾 | ヘルプ
タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
1C40A-2ZLWD
confEVID 1C40A-2ZLWD
pdbIDA 1C40
pdbIDB 2ZLW
pdbChainA A
pdbChainB D
identity 0.374099999666214
indelSize 1
alignment <alignment>
<seq1>-VLSAADKTNVKGVFSKISGHAEEYGAETLERMFTAYPQTKTYFPHFD------LQHGSAQIKAHGKKVVAALVEAVNHIDDIAGALSKLSNLHAQKLRVDPVNFKFLGHCFLVVVAIHHPSALTAEVHASLDKFLCAVGTVLTAKYR</seq1>
<seq2>VQLSGEEKAAVLALWDKV--NEEEVGGEALGRLLVVYPWTQRFFDSFGDLSNPGAVMGNPKVKAHGKKVLHSFGEGVHHLDNLKGTFAALSELHCDKLHVDPENFRLLGNVLVVVLARHFGKDFTPELQASYQKVVAGVANALAHKYH</seq2>
<ss_1>- HHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHH GGGG ------ HHHHHHHHHHHHHHHHHHH HHHH HHHHHIIIII HHHHHHHHHHHHHHHH HHHHHHHHHHHHHHHHHHH </ss_1>
<ss_2> HHHHHHHHHH -- HHHHHHHHHHHHHHH GGG GGG HHHHHHHHHHHHHHHHHGGG HHHHHHHHIIIII HHHHHHHHHHHHHHHHHGGG HHHHHHHHHHHHHHHH </ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>2ZLW</pdbID>
<pdbChain>D</pdbChain>
<entryIDChain>2ZLWD</entryIDChain>
<sequence>LWDKV--NEEEV</sequence>
<secondary-structure>H -- HHHH</secondary-structure>
<atom-coordinate>
<line>ATOM 3356 CA LEU D 14 -35.699 13.034 19.487 1.00 17.31 C </line>
<line>ATOM 3364 CA TRP D 15 -34.693 14.376 22.932 1.00 9.39 C </line>
<line>ATOM 3378 CA ASP D 16 -38.152 15.870 23.251 1.00 14.74 C </line>
<line>ATOM 3386 CA LYS D 17 -39.432 12.308 23.248 1.00 11.42 C </line>
<line>ATOM 3395 CA VAL D 18 -36.675 11.004 25.537 1.00 8.25 C </line>
<line>ATOM 3402 CA ASN D 19 -38.278 10.039 28.858 1.00 20.92 C </line>
<line>ATOM 3410 CA GLU D 20 -35.552 10.733 31.453 1.00 19.36 C </line>
<line>ATOM 3419 CA GLU D 21 -36.596 8.388 34.268 1.00 17.54 C </line>
<line>ATOM 3428 CA GLU D 22 -37.459 5.552 31.900 1.00 16.80 C </line>
<line>ATOM 3437 CA VAL D 23 -34.329 5.859 29.756 1.00 11.40 C </line>
</atom-coordinate>
<distance-map>
<line> VAL GLU GLU GLU ASN VAL LYS ASP TRP LEU </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>LEU CA 12.60 14.60 15.52 12.19 10.17 6.46 5.35 5.31 3.83 </line>
<line>TRP CA 10.92 12.88 12.96 9.31 8.17 4.70 5.18 3.78 </line>
<line>ASP CA 12.54 13.48 13.41 10.02 8.09 5.58 3.79 </line>
<line>LYS CA 10.49 11.15 12.04 9.21 6.16 3.81 </line>
<line>VAL CA 7.06 8.42 9.11 6.03 3.81 </line>
<line>ASN CA 5.82 5.48 5.90 3.83 </line>
<line>GLU CA 5.30 5.54 3.81 </line>
<line>GLU CA 5.65 3.79 </line>
<line>GLU CA 3.81 </line>
<line>VAL CA </line>
</distance-map>
<n14>
<line>LEU CA 322</line>
<line>TRP CA 345</line>
<line>ASP CA 234</line>
<line>LYS CA 240</line>
<line>VAL CA 335</line>
<line>ASN CA 287</line>
<line>GLU CA 319</line>
<line>GLU CA 288</line>
<line>GLU CA 310</line>
<line>VAL CA 374</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1C40</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1C40A</entryIDChain>
<sequence>VFSKISGHAEEY</sequence>
<secondary-structure>HHHHHGGGHHHH</secondary-structure>
<atom-coordinate>
<line>ATOM 85 CA VAL A 13 -15.873 24.247 7.635 1.00 23.96 C </line>
<line>ATOM 92 CA PHE A 14 -17.706 27.241 6.205 1.00 23.86 C </line>
<line>ATOM 103 CA SER A 15 -19.910 24.972 4.094 1.00 36.25 C </line>
<line>ATOM 109 CA LYS A 16 -21.189 23.545 7.372 1.00 43.27 C </line>
<line>ATOM 118 CA ILE A 17 -21.941 26.883 9.000 1.00 47.18 C </line>
<line>ATOM 126 CA SER A 18 -23.252 28.794 5.966 1.00 53.08 C </line>
<line>ATOM 132 CA GLY A 19 -26.662 27.402 6.783 1.00 46.64 C </line>
<line>ATOM 136 CA HIS A 20 -26.767 29.059 10.218 1.00 38.52 C </line>
<line>ATOM 146 CA ALA A 21 -25.116 32.476 9.729 1.00 33.29 C </line>
<line>ATOM 151 CA GLU A 22 -27.620 34.280 11.940 1.00 31.60 C </line>
<line>ATOM 160 CA GLU A 23 -27.640 31.702 14.710 1.00 29.54 C </line>
<line>ATOM 169 CA TYR A 24 -23.868 31.252 14.942 1.00 18.89 C </line>
</atom-coordinate>
<distance-map>
<line> TYR GLU GLU ALA HIS GLY SER ILE LYS SER PHE VAL </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>VAL CA 12.90 15.62 16.04 12.55 12.19 11.27 8.83 6.76 5.37 5.42 3.79 </line>
<line>PHE CA 11.42 13.82 13.44 9.73 10.08 8.98 5.76 5.09 5.21 3.80 </line>
<line>SER CA 13.14 14.76 14.41 10.73 10.06 7.66 5.41 5.64 3.80 </line>
<line>LYS CA 11.13 12.73 13.32 10.04 8.34 6.72 5.81 3.79 </line>
<line>ILE CA 7.62 9.40 9.78 6.47 5.43 5.24 3.82 </line>
<line>SER CA 9.33 10.21 9.21 5.58 5.52 3.77 </line>
<line>GLY CA 9.44 9.07 8.65 6.07 3.82 </line>
<line>HIS CA 5.96 5.28 5.56 3.83 </line>
<line>ALA CA 5.50 5.64 3.80 </line>
<line>GLU CA 5.68 3.78 </line>
<line>GLU CA 3.81 </line>
<line>TYR CA </line>
</distance-map>
<n14>
<line>VAL CA 359</line>
<line>PHE CA 371</line>
<line>SER CA 249</line>
<line>LYS CA 269</line>
<line>ILE CA 333</line>
<line>SER CA 274</line>
<line>GLY CA 208</line>
<line>HIS CA 261</line>
<line>ALA CA 307</line>
<line>GLU CA 285</line>
<line>GLU CA 307</line>
<line>TYR CA 371</line>
</n14>
</entryChain>
<parallel>
<x>-14.869000434875488</x>
<y>-15.869000434875488</y>
<z>17.854999542236328</z>
</parallel>
<rotation>
<x>0.7059999704360962</x>
<y>0.14800000190734863</y>
<z>-0.6930000185966492</z>
<x>0.6850000023841858</x>
<y>0.10400000214576721</y>
<z>0.7210000157356262</z>
<x>0.17900000512599945</x>
<y>-0.9829999804496765</y>
<z>-0.02800000086426735</z>
</rotation>
<rmsd>0.8376960158348083</rmsd>
<dmax>1.6856659650802612</dmax>
</indel>