NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | 利用許諾 | ヘルプ
タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
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Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
1C5DA-3FCTA
confEVID 1C5DA-3FCTA
pdbIDA 1C5D
pdbIDB 3FCT
pdbChainA A
pdbChainB A
identity 0.591499984264374
indelSize 1
alignment <alignment>
<seq1>DIQMTQSPPSLSASLGDKVTITCQASQDINKYIAWYQQKPGKAPRQLIRYTSILVLGTPSRFSGSGSGRDFSFSISNVASEDIASYYCLQYGN-LYTFGAGTKLEIKRADAAPTVSIFPPSTEQLATGGASVVCLMNNFYPRDISVKWKIDGTERRDGVLDSVTDQDSKDSTYSMSSTLSLTKADYESHNLYTCEVVHKTSSSPVVKSFNRNEC</seq1>
<seq2>ELVMTQTPKFMSTTVGDRVSITCKASQNVGTPVAWYQQKPGQSPKLLIYSASNRYTGVPDRFTGSGSGTDFTLTISNMQSEDLADYFCQQYSSYPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRNE-</seq2>
<ss_1> EEE EEEE EEEEEE EEEEEEE EEEEE EEE EEEEEEEEEEEEEEE GGG EEEEEEE - EEEEEE EEEEE HHHHH EEEEEEEEEEEEE EEE EEEEE EEEEEEEEEE HHHH EEE EEE </ss_1>
<ss_2> EEEEE EEEE EEEEEE EEEEE EEEEE EEE EEEEEEEEEEEEEEE GGG EEEEEEE EE EEEEEE EEE HHHH EEEEEEEEEEEEE EEEEEE EEEEE EEEEEEEEEE EEEEEEEE EEEEEE -</ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>1C5D</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1C5DA</entryIDChain>
<sequence>LQYGN-LYTFG</sequence>
<secondary-structure>EE - </secondary-structure>
<atom-coordinate>
<line>ATOM 3925 CA LEU A 89 -8.668 18.469 133.333 1.00 15.16 C </line>
<line>ATOM 3933 CA GLN A 90 -8.782 17.835 137.071 1.00 21.81 C </line>
<line>ATOM 3942 CA TYR A 91 -6.892 14.736 138.218 1.00 23.61 C </line>
<line>ATOM 3954 CA GLY A 92 -7.096 15.410 141.946 1.00 25.20 C </line>
<line>ATOM 3958 CA ASN A 93 -9.981 13.010 142.543 1.00 27.22 C </line>
<line>ATOM 3966 CA LEU A 94 -10.477 10.732 139.570 1.00 27.01 C </line>
<line>ATOM 3974 CA TYR A 95 -10.711 12.660 136.268 1.00 21.42 C </line>
<line>ATOM 3986 CA THR A 96 -12.952 15.430 134.905 1.00 19.47 C </line>
<line>ATOM 3993 CA PHE A 97 -12.585 17.594 131.753 1.00 16.76 C </line>
<line>ATOM 4004 CA GLY A 98 -13.991 21.118 131.326 1.00 17.37 C </line>
</atom-coordinate>
<distance-map>
<line> GLY PHE THR TYR LEU ASN GLY TYR GLN LEU </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>LEU CA 6.28 4.31 5.48 6.82 10.10 10.79 9.27 6.40 3.79 </line>
<line>GLN CA 8.42 6.54 5.28 5.58 7.72 7.39 5.70 3.81 </line>
<line>TYR CA 11.77 9.08 6.94 4.76 5.54 5.59 3.79 </line>
<line>GLY CA 13.89 11.78 9.16 7.27 6.24 3.80 </line>
<line>ASN CA 14.41 12.01 8.55 6.33 3.78 </line>
<line>LEU CA 13.72 10.61 7.07 3.83 </line>
<line>TYR CA 10.33 6.95 3.81 </line>
<line>THR CA 6.80 3.84 </line>
<line>PHE CA 3.82 </line>
<line>GLY CA </line>
</distance-map>
<n14>
<line>LEU CA 457</line>
<line>GLN CA 410</line>
<line>TYR CA 316</line>
<line>GLY CA 286</line>
<line>ASN CA 223</line>
<line>LEU CA 197</line>
<line>TYR CA 261</line>
<line>THR CA 295</line>
<line>PHE CA 360</line>
<line>GLY CA 374</line>
</n14>
</entryChain>
<entryChain>
<pdbID>3FCT</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>3FCTA</entryIDChain>
<sequence>QQYSSYPLTFG</sequence>
<secondary-structure>EE EE </secondary-structure>
<atom-coordinate>
<line>ATOM 675 CA GLN A 89 31.570 -8.981 18.322 1.00 26.20 C </line>
<line>ATOM 684 CA GLN A 90 32.093 -9.600 22.017 1.00 28.21 C </line>
<line>ATOM 693 CA TYR A 91 29.399 -9.160 24.646 1.00 33.71 C </line>
<line>ATOM 705 CA SER A 92 30.774 -10.607 27.864 1.00 39.93 C </line>
<line>ATOM 711 CA SER A 93 31.761 -7.160 29.119 1.00 42.84 C </line>
<line>ATOM 717 CA TYR A 94 30.791 -3.514 28.635 1.00 40.34 C </line>
<line>ATOM 729 CA PRO A 95 31.479 -1.591 26.508 1.00 36.26 C </line>
<line>ATOM 736 CA LEU A 96 30.555 -3.927 23.636 1.00 30.73 C </line>
<line>ATOM 744 CA THR A 97 33.315 -4.187 21.032 1.00 25.31 C </line>
<line>ATOM 751 CA PHE A 98 33.425 -5.081 17.332 1.00 21.43 C </line>
<line>ATOM 762 CA GLY A 99 36.200 -6.532 15.209 1.00 20.35 C </line>
</atom-coordinate>
<distance-map>
<line> GLY PHE THR LEU PRO TYR SER SER TYR GLN GLN </line>
<line> CA CA CA CA CA CA CA CA CA CA CA </line>
<line>GLN CA 6.09 4.43 5.78 7.40 11.03 11.70 10.95 9.71 6.69 3.78 </line>
<line>GLN CA 8.52 6.64 5.64 6.10 9.20 9.08 7.52 6.08 3.79 </line>
<line>TYR CA 11.93 9.29 7.29 5.45 8.07 7.05 5.44 3.79 </line>
<line>SER CA 14.36 12.19 9.71 7.91 9.14 7.13 3.80 </line>
<line>SER CA 14.61 12.08 8.76 6.48 6.16 3.80 </line>
<line>TYR CA 14.79 11.71 8.04 5.02 2.95 </line>
<line>PRO CA 13.20 10.01 6.33 3.82 </line>
<line>LEU CA 10.47 7.02 3.80 </line>
<line>THR CA 6.91 3.81 </line>
<line>PHE CA 3.78 </line>
<line>GLY CA </line>
</distance-map>
<n14>
<line>GLN CA 444</line>
<line>GLN CA 388</line>
<line>TYR CA 295</line>
<line>SER CA 252</line>
<line>SER CA 205</line>
<line>TYR CA 162</line>
<line>PRO CA 161</line>
<line>LEU CA 218</line>
<line>THR CA 275</line>
<line>PHE CA 356</line>
<line>GLY CA 370</line>
</n14>
</entryChain>
<parallel>
<x>-40.8129997253418</x>
<y>21.687000274658203</y>
<z>113.83899688720703</z>
</parallel>
<rotation>
<x>-0.8190000057220459</x>
<y>0.5040000081062317</y>
<z>0.2750000059604645</z>
<x>-0.5699999928474426</x>
<y>-0.7720000147819519</y>
<z>-0.28299999237060547</z>
<x>0.07000000029802322</x>
<y>-0.3880000114440918</y>
<z>0.9190000295639038</z>
</rotation>
<rmsd>0.990513026714325</rmsd>
<dmax>2.2999260425567627</dmax>
</indel>