NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | 利用許諾 | ヘルプ
タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
1C75A-1CTJA
confEVID 1C75A-1CTJA
pdbIDA 1C75
pdbIDB 1CTJ
pdbChainA A
pdbChainB A
identity 0.25
indelSize 3
alignment <alignment>
<seq1>-VD---AEAVVQQKCISCHGGDLTGASA--PAID-KAGANY-----SEEEILDIILNGQGGMPG--GIAKGAEAEAVAAWLAEKK-----</seq1>
<seq2>EADLALGKAVFDGNCAACHAGG-GNNVIPDHTLQKAAIEQFLDGGFNIEAIVYQIENGKGAMPAWDGRLDEDEIAGVAAYVYDQAAGNKW</seq2>
<ss_1>- ---HHHHHHH HHHH -- - HHHH----- HHHHHHHHHH -- HHHHHHHHHHHH -----</ss_1>
<ss_2> HHHHHHHHHH HHHHGGG- HHHHHHH HHHHHHHHHH HHHHHHHHHHHHHHHH </ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>1C75</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1C75A</entryIDChain>
<sequence>AGANY-----SEEEI</sequence>
<secondary-structure> HHHH----- HHHH</secondary-structure>
<atom-coordinate>
<line>ATOM 398 CA ALA A 51 14.760 32.155 7.273 1.00 8.14 C </line>
<line>ATOM 408 CA GLY A 52 13.403 35.345 8.784 1.00 7.77 C </line>
<line>ATOM 415 CA ALA A 53 16.767 37.026 8.178 1.00 8.24 C </line>
<line>ATOM 425 CA ASN A 54 16.361 36.440 4.434 1.00 8.68 C </line>
<line>ATOM 439 CA TYR A 55 12.587 36.465 3.820 1.00 8.20 C </line>
<line>ATOM 460 CA SER A 56 9.561 38.400 5.008 1.00 9.84 C </line>
<line>ATOM 471 CA GLU A 57 6.644 36.606 6.649 1.00 8.94 C </line>
<line>ATOM 486 CA GLU A 58 4.632 37.023 3.426 1.00 8.13 C </line>
<line>ATOM 502 CA GLU A 59 7.446 35.596 1.296 1.00 7.80 C </line>
<line>ATOM 517 CA ILE A 60 7.640 32.578 3.627 1.00 6.81 C </line>
</atom-coordinate>
<distance-map>
<line> ILE GLU GLU GLU SER TYR ASN ALA GLY ALA </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>ALA CA 8.01 10.05 11.88 9.28 8.44 5.93 5.38 5.35 3.78 </line>
<line>GLY CA 8.21 9.57 10.41 7.20 6.19 5.15 5.37 3.81 </line>
<line>ALA CA 11.13 11.67 13.03 10.25 7.99 6.06 3.81 </line>
<line>ASN CA 9.57 9.49 11.79 9.97 7.10 3.82 </line>
<line>TYR CA 6.29 5.79 7.98 6.58 3.78 </line>
<line>SER CA 6.28 5.11 5.36 3.80 </line>
<line>GLU CA 5.13 5.51 3.82 </line>
<line>GLU CA 5.37 3.81 </line>
<line>GLU CA 3.82 </line>
<line>ILE CA </line>
</distance-map>
<n14>
<line>ALA CA 560</line>
<line>GLY CA 469</line>
<line>ALA CA 339</line>
<line>ASN CA 373</line>
<line>TYR CA 450</line>
<line>SER CA 410</line>
<line>GLU CA 481</line>
<line>GLU CA 425</line>
<line>GLU CA 452</line>
<line>ILE CA 652</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1CTJ</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1CTJA</entryIDChain>
<sequence>AIEQFLDGGFNIEAI</sequence>
<secondary-structure>HHHHH HHHH</secondary-structure>
<atom-coordinate>
<line>ATOM 283 CA ALA A 36 19.881 45.898 -6.172 1.00 18.89 C </line>
<line>ATOM 288 CA ILE A 37 16.196 45.010 -6.301 1.00 18.49 C </line>
<line>ATOM 296 CA GLU A 38 15.901 45.242 -2.513 1.00 25.91 C </line>
<line>ATOM 305 CA GLN A 39 17.316 48.805 -2.691 1.00 30.19 C </line>
<line>ATOM 314 CA PHE A 40 15.827 50.278 -5.889 1.00 26.50 C </line>
<line>ATOM 325 CA LEU A 41 12.616 48.446 -6.754 1.00 23.83 C </line>
<line>ATOM 333 CA ASP A 42 9.794 50.401 -5.215 1.00 29.11 C </line>
<line>ATOM 345 CA GLY A 43 8.110 47.547 -3.143 1.00 31.54 C </line>
<line>ATOM 349 CA GLY A 44 11.280 45.416 -2.606 1.00 32.21 C </line>
<line>ATOM 353 CA PHE A 45 12.334 41.872 -3.507 1.00 28.54 C </line>
<line>ATOM 364 CA ASN A 46 8.889 40.257 -3.786 1.00 36.75 C </line>
<line>ATOM 372 CA ILE A 47 6.964 38.832 -6.727 1.00 28.94 C </line>
<line>ATOM 380 CA GLU A 48 4.132 41.350 -6.502 1.00 31.74 C </line>
<line>ATOM 394 CA ALA A 49 6.648 44.227 -6.659 1.00 27.88 C </line>
<line>ATOM 399 CA ILE A 50 8.175 42.658 -9.797 1.00 20.61 C </line>
</atom-coordinate>
<distance-map>
<line> ILE ALA GLU ILE ASN PHE GLY GLY ASP LEU PHE GLN GLU ILE ALA </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>ALA CA 12.68 13.35 16.40 14.73 12.58 8.96 9.32 12.27 11.09 7.72 5.97 5.21 5.45 3.79 </line>
<line>ILE CA 9.06 9.59 12.61 11.12 9.07 5.71 6.16 9.04 8.44 4.98 5.30 5.36 3.81 </line>
<line>GLU CA 10.93 10.19 13.02 11.78 8.70 5.01 4.63 8.15 8.44 6.25 6.06 3.84 </line>
<line>GLN CA 13.11 12.27 15.62 14.93 12.05 8.58 6.92 9.30 8.09 6.22 3.82 </line>
<line>PHE CA 11.48 11.02 14.73 14.50 12.37 9.41 7.42 8.63 6.07 3.80 </line>
<line>LEU CA 7.90 7.31 11.06 11.15 9.47 7.34 5.31 5.84 3.76 </line>
<line>ASP CA 9.14 7.08 10.75 12.01 10.28 9.06 5.82 3.91 </line>
<line>GLY CA 8.26 5.05 8.09 9.49 7.36 7.08 3.86 </line>
<line>GLY CA 8.30 6.27 9.10 8.89 5.81 3.81 </line>
<line>PHE CA 7.58 6.91 8.75 6.96 3.81 </line>
<line>ASN CA 6.51 5.39 5.59 3.79 </line>
<line>ILE CA 5.05 5.40 3.80 </line>
<line>GLU CA 5.38 3.83 </line>
<line>ALA CA 3.83 </line>
<line>ILE CA </line>
</distance-map>
<n14>
<line>ALA CA 261</line>
<line>ILE CA 326</line>
<line>GLU CA 224</line>
<line>GLN CA 183</line>
<line>PHE CA 236</line>
<line>LEU CA 299</line>
<line>ASP CA 226</line>
<line>GLY CA 208</line>
<line>GLY CA 231</line>
<line>PHE CA 267</line>
<line>ASN CA 256</line>
<line>ILE CA 291</line>
<line>GLU CA 230</line>
<line>ALA CA 278</line>
<line>ILE CA 382</line>
</n14>
</entryChain>
<parallel>
<x>-1.2990000247955322</x>
<y>-8.277000427246094</y>
<z>11.019000053405762</z>
</parallel>
<rotation>
<x>0.7390000224113464</x>
<y>-0.35199999809265137</y>
<z>0.5740000009536743</z>
<x>0.5669999718666077</x>
<y>-0.13500000536441803</y>
<z>-0.8130000233650208</z>
<x>0.3630000054836273</x>
<y>0.9259999990463257</y>
<z>0.10000000149011612</z>
</rotation>
<rmsd>3.0948140621185303</rmsd>
<dmax>5.192462921142578</dmax>
</indel>
<indel>
<confEVID></confEVID>
<index>1</index>
<entryChain>
<pdbID>1C75</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1C75A</entryIDChain>
<sequence>GGMPG--GIAKG</sequence>
<secondary-structure> -- H</secondary-structure>
<atom-coordinate>
<line>ATOM 664 CA GLY A 69 12.089 26.252 -7.218 1.00 10.43 C </line>
<line>ATOM 671 CA GLY A 70 12.672 22.681 -6.045 1.00 8.24 C </line>
<line>ATOM 678 CA MET A 71 10.167 22.901 -3.132 1.00 6.24 C </line>
<line>ATOM 695 CA PRO A 72 6.612 21.658 -3.871 1.00 7.99 C </line>
<line>ATOM 706 CA GLY A 73 3.517 23.582 -2.962 1.00 9.82 C </line>
<line>ATOM 713 CA GLY A 74 0.696 22.480 -0.742 1.00 12.03 C </line>
<line>ATOM 720 CA ILE A 75 2.631 21.044 2.185 1.00 10.58 C </line>
<line>ATOM 739 CA ALA A 76 0.758 23.286 4.640 1.00 10.86 C </line>
<line>ATOM 749 CA LYS A 77 -2.308 25.479 4.219 1.00 9.10 C </line>
<line>ATOM 771 CA GLY A 78 -4.387 28.195 5.801 1.00 11.89 C </line>
</atom-coordinate>
<distance-map>
<line> GLY LYS ALA ILE GLY GLY PRO MET GLY GLY </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>GLY CA 21.09 18.40 16.67 14.32 13.64 9.94 7.89 5.62 3.80 </line>
<line>GLY CA 21.49 18.37 16.01 13.09 13.10 9.70 6.52 3.85 </line>
<line>MET CA 17.88 14.71 12.21 9.41 9.78 6.69 3.84 </line>
<line>PRO CA 16.04 12.63 10.46 7.27 6.74 3.76 </line>
<line>GLY CA 12.67 9.44 8.09 5.81 3.76 </line>
<line>GLY CA 10.07 6.53 5.44 3.79 </line>
<line>ILE CA 10.65 6.94 3.82 </line>
<line>ALA CA 7.21 3.79 </line>
<line>LYS CA 3.77 </line>
<line>GLY CA </line>
</distance-map>
<n14>
<line>GLY CA 239</line>
<line>GLY CA 257</line>
<line>MET CA 392</line>
<line>PRO CA 334</line>
<line>GLY CA 356</line>
<line>GLY CA 375</line>
<line>ILE CA 490</line>
<line>ALA CA 518</line>
<line>LYS CA 419</line>
<line>GLY CA 362</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1CTJ</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1CTJA</entryIDChain>
<sequence>GAMPAWDGRLDE</sequence>
<secondary-structure> H</secondary-structure>
<atom-coordinate>
<line>ATOM 478 CA GLY A 59 10.600 55.780 -16.122 1.00 24.09 C </line>
<line>ATOM 482 CA ALA A 60 12.487 54.467 -19.134 1.00 17.12 C </line>
<line>ATOM 487 CA MET A 61 11.150 50.952 -18.582 1.00 13.70 C </line>
<line>ATOM 495 CA PRO A 62 8.020 50.421 -20.732 1.00 16.18 C </line>
<line>ATOM 502 CA ALA A 63 4.781 49.042 -19.360 1.00 17.07 C </line>
<line>ATOM 507 CA TRP A 64 3.740 45.574 -20.460 1.00 17.37 C </line>
<line>ATOM 521 CA ASP A 65 0.034 45.381 -19.394 1.00 23.88 C </line>
<line>ATOM 529 CA GLY A 66 -1.989 44.167 -22.357 1.00 25.87 C </line>
<line>ATOM 533 CA ARG A 67 1.093 43.339 -24.432 1.00 21.87 C </line>
<line>ATOM 551 CA LEU A 68 1.974 40.254 -22.315 1.00 20.35 C </line>
<line>ATOM 559 CA ASP A 69 -0.779 38.062 -20.853 1.00 27.42 C </line>
<line>ATOM 567 CA GLU A 70 -1.227 37.089 -17.231 1.00 31.38 C </line>
</atom-coordinate>
<distance-map>
<line> GLU ASP LEU ARG GLY ASP TRP ALA PRO MET ALA GLY </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>GLY CA 22.15 21.58 18.81 17.73 18.23 15.18 13.04 9.47 7.53 5.45 3.79 </line>
<line>ALA CA 22.22 21.17 17.96 16.78 18.06 15.42 12.54 9.43 6.24 3.80 </line>
<line>MET CA 18.63 17.71 14.58 13.90 15.26 12.46 9.35 6.69 3.83 </line>
<line>PRO CA 16.60 15.17 11.93 10.57 11.91 9.54 6.47 3.78 </line>
<line>ALA CA 13.55 12.40 9.69 8.48 8.86 5.99 3.78 </line>
<line>TRP CA 10.35 8.78 5.90 5.27 6.20 3.86 </line>
<line>ASP CA 8.66 7.51 6.21 5.54 3.79 </line>
<line>GLY CA 8.77 6.40 5.57 3.81 </line>
<line>ARG CA 9.81 6.65 3.84 </line>
<line>LEU CA 6.79 3.81 </line>
<line>ASP CA 3.78 </line>
<line>GLU CA </line>
</distance-map>
<n14>
<line>GLY CA 171</line>
<line>ALA CA 179</line>
<line>MET CA 272</line>
<line>PRO CA 227</line>
<line>ALA CA 221</line>
<line>TRP CA 260</line>
<line>ASP CA 213</line>
<line>GLY CA 158</line>
<line>ARG CA 186</line>
<line>LEU CA 231</line>
<line>ASP CA 199</line>
<line>GLU CA 211</line>
</n14>
</entryChain>
<parallel>
<x>0.12800000607967377</x>
<y>-25.566999435424805</y>
<z>18.236000061035156</z>
</parallel>
<rotation>
<x>0.9769999980926514</x>
<y>-0.0860000029206276</y>
<z>0.19699999690055847</z>
<x>0.18199999630451202</x>
<y>-0.15700000524520874</y>
<z>-0.9710000157356262</z>
<x>0.11400000005960464</x>
<y>0.984000027179718</y>
<z>-0.13699999451637268</z>
</rotation>
<rmsd>2.183320999145508</rmsd>
<dmax>3.732619047164917</dmax>
</indel>
<indel>
<confEVID></confEVID>
<index>2</index>
<entryChain>
<pdbID>1CTJ</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1CTJA</entryIDChain>
<sequence>CHAGG-GNNVI</sequence>
<secondary-structure>HHGGG- </secondary-structure>
<atom-coordinate>
<line>ATOM 136 CA CYS A 18 17.810 46.086 -21.627 1.00 11.93 C </line>
<line>ATOM 142 CA HIS A 19 18.626 43.402 -19.037 1.00 11.21 C </line>
<line>ATOM 152 CA ALA A 20 20.590 40.564 -20.699 1.00 13.89 C </line>
<line>ATOM 157 CA GLY A 21 22.878 38.914 -18.160 1.00 16.60 C </line>
<line>ATOM 161 CA GLY A 22 20.891 40.484 -15.305 1.00 14.60 C </line>
<line>ATOM 165 CA GLY A 23 22.174 44.005 -15.812 1.00 14.21 C </line>
<line>ATOM 169 CA ASN A 24 20.513 47.284 -16.795 1.00 13.79 C </line>
<line>ATOM 177 CA ASN A 25 21.797 49.056 -19.915 1.00 16.64 C </line>
<line>ATOM 185 CA VAL A 26 19.861 52.270 -19.156 1.00 17.76 C </line>
<line>ATOM 192 CA ILE A 27 20.505 52.839 -15.425 1.00 20.98 C </line>
</atom-coordinate>
<distance-map>
<line> ILE VAL ASN ASN GLY GLY GLY ALA HIS CYS </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>CYS CA 9.56 6.97 5.26 5.66 7.56 8.99 9.44 6.25 3.82 </line>
<line>HIS CA 10.28 8.95 6.54 4.86 4.83 5.25 6.24 3.83 </line>
<line>ALA CA 13.36 11.83 8.61 7.77 6.18 5.40 3.80 </line>
<line>GLY CA 14.39 13.73 10.35 8.80 5.65 3.82 </line>
<line>GLY CA 12.36 12.44 9.78 6.97 3.78 </line>
<line>GLY CA 9.00 9.21 6.52 3.80 </line>
<line>ASN CA 5.72 5.56 3.81 </line>
<line>ASN CA 6.01 3.83 </line>
<line>VAL CA 3.83 </line>
<line>ILE CA </line>
</distance-map>
<n14>
<line>CYS CA 247</line>
<line>HIS CA 313</line>
<line>ALA CA 239</line>
<line>GLY CA 235</line>
<line>GLY CA 316</line>
<line>GLY CA 262</line>
<line>ASN CA 250</line>
<line>ASN CA 175</line>
<line>VAL CA 172</line>
<line>ILE CA 186</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1C75</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1C75A</entryIDChain>
<sequence>CHGGDLTGASA</sequence>
<secondary-structure>HH </secondary-structure>
<atom-coordinate>
<line>ATOM 197 CA CYS A 35 13.966 18.031 3.563 1.00 7.00 C </line>
<line>ATOM 207 CA HIS A 36 15.245 20.824 5.836 1.00 5.60 C </line>
<line>ATOM 224 CA GLY A 37 16.789 18.770 8.667 1.00 6.95 C </line>
<line>ATOM 231 CA GLY A 38 15.666 18.114 12.208 1.00 7.70 C </line>
<line>ATOM 238 CA ASP A 39 17.220 21.291 13.507 1.00 8.24 C </line>
<line>ATOM 250 CA LEU A 40 16.346 23.213 10.307 1.00 6.98 C </line>
<line>ATOM 269 CA THR A 41 20.020 23.636 9.330 1.00 7.03 C </line>
<line>ATOM 283 CA GLY A 42 19.525 21.852 6.010 1.00 7.78 C </line>
<line>ATOM 290 CA ALA A 43 19.481 18.270 4.780 1.00 8.43 C </line>
<line>ATOM 300 CA SER A 44 18.547 17.438 1.174 1.00 9.88 C </line>
<line>ATOM 311 CA ALA A 45 17.224 21.010 0.962 1.00 7.01 C </line>
</atom-coordinate>
<distance-map>
<line> ALA SER ALA GLY THR LEU ASP GLY GLY HIS CYS </line>
<line> CA CA CA CA CA CA CA CA CA CA CA </line>
<line>CYS CA 5.12 5.20 5.65 7.18 10.07 8.83 10.96 8.81 5.88 3.82 </line>
<line>HIS CA 5.26 6.64 5.06 4.41 6.55 5.19 7.93 6.94 3.82 </line>
<line>GLY CA 8.04 7.81 4.75 4.90 5.88 4.76 5.47 3.77 </line>
<line>GLY CA 11.72 11.42 8.35 8.20 7.60 5.48 3.77 </line>
<line>ASP CA 12.55 12.99 9.51 7.86 5.55 3.83 </line>
<line>LEU CA 9.64 11.03 8.05 5.52 3.83 </line>
<line>THR CA 9.21 10.35 7.06 3.80 </line>
<line>GLY CA 5.61 6.62 3.79 </line>
<line>ALA CA 5.21 3.82 </line>
<line>SER CA 3.82 </line>
<line>ALA CA </line>
</distance-map>
<n14>
<line>CYS CA 406</line>
<line>HIS CA 492</line>
<line>GLY CA 364</line>
<line>GLY CA 353</line>
<line>ASP CA 384</line>
<line>LEU CA 503</line>
<line>THR CA 370</line>
<line>GLY CA 348</line>
<line>ALA CA 267</line>
<line>SER CA 248</line>
<line>ALA CA 360</line>
</n14>
</entryChain>
<parallel>
<x>3.4210000038146973</x>
<y>23.625999450683594</y>
<z>-26.4060001373291</z>
</parallel>
<rotation>
<x>0.7839999794960022</x>
<y>0.5220000147819519</y>
<z>0.335999995470047</z>
<x>-0.4699999988079071</x>
<y>0.1469999998807907</y>
<z>0.8700000047683716</z>
<x>0.4050000011920929</x>
<y>-0.8399999737739563</y>
<z>0.3610000014305115</z>
</rotation>
<rmsd>1.725816011428833</rmsd>
<dmax>2.554910898208618</dmax>
</indel>