1CERQ-1GD1O | |
confEVID | 1CERQ-1GD1O |
pdbIDA | 1CER |
pdbIDB | 1GD1 |
pdbChainA | Q |
pdbChainB | O |
identity | 0.621599972248077 |
indelSize | 2 |
alignment | <alignment> <seq1>-MKVGINGFGRIGRQVFRILHSRG-VEVALINDLTDNKTLAHLLKYDSIYHRFPGEVAYDDQYLYVDGKAIRATAVKDPKEIPWAEAGVGVVIESTGVFTDADKAKAHLEGGAKKVIITAPAKGEDITIVMGVNHEAYDPSRHHIISNASCTTNSLAPVMKVLEEAFGVEKALMTTVHSYTNDQRLLDLPHKDLRRARAAAINIIPTTTGAAKATALVLPSLKGRFDGMALRVPTATGSISDITALLKREVTAEEVNAALKAAAEGPLKGILAYTEDEIVLQDIVMDPHSSIVDAKLTKALG-NMVKVFAWYDNEWGYANRVADLVELVLRKGV</seq1> <seq2>AVKVGINGFGRIGRNVFRAALKNPDIEVVAVNDLTDANTLAHLLKYDSVHGRLDAEVSVNGNNLVVNGKEIIVKAERDPENLAWGEIGVDIVVESTGRFTKREDAAKHLEAGAKKVIISAPAKNEDITIVMGVNQDKYDPKAHHVISNASCTTNCLAPFAKVLHEQFGIVRGMMTTVHSYTNDQRILDLPHKDLRRARAAAESIIPTTTGAAKAVALVLPELKGKLNGMAMRVPTPNVSVVDLVAELEKEVTVEEVNAALKAAAEGELKGILAYSEEPLVSRDYNGSTVSSTIDALSTMVIDGKMVKVVSWYDNETGYSHRVVDLAAYIASKGL</seq2> <ss_1>- EEEE HHHHHHHHHHHH - EEE HHHHHHHHH EEE EEEEE EEEEEE EEEE HHHGGG EEEE GGG HHHH EEE HHHHHHHHHHHHH EEEEEEEE HHHH GGG EEE GGGG EEEEEE EEEEEEEEE HHHHHHHHHHHH EEEE GGG EEEEGGG EEEE-EEEEEEEEEE HHHHHHHHHHHHHHHH </ss_1> <ss_2> EEEEEE HHHHHHHHHGGG EEE EEE HHHHHHHHEEE EEE EEEEE EEEE EEEEEE EEEE HHHGGHHHH EEEE GGG EEE HHHHHHHHHHHHHHH EEEEEEEE HHHH EEE GGGG EEEEEE EEEEEEEE HHHHHHHHHHHHH EE GGGG EEEEGGG EEE EEEEEEEEEE HHHHHHHHHHHHHHHH </ss_2> </alignment> |
indel | <indel> <confEVID></confEVID> <index>0</index> <entryChain> <pdbID>1CER</pdbID> <pdbChain>Q</pdbChain> <entryIDChain>1CERQ</entryIDChain> <sequence>LHSRG-VEVAL</sequence> <secondary-structure>HHH - E</secondary-structure> <atom-coordinate> <line>ATOM 5115 CA LEU Q 19 4.791 -2.439 -5.735 1.00 20.02 C </line> <line>ATOM 5123 CA HIS Q 20 3.007 -3.986 -2.892 1.00 25.89 C </line> <line>ATOM 5133 CA SER Q 21 2.054 -0.827 -1.075 1.00 30.84 C </line> <line>ATOM 5139 CA ARG Q 22 0.988 0.683 -4.407 1.00 31.71 C </line> <line>ATOM 5150 CA GLY Q 23 -1.431 -2.170 -5.032 1.00 30.00 C </line> <line>ATOM 5154 CA VAL Q 25 0.297 -3.662 -8.079 1.00 28.81 C </line> <line>ATOM 5161 CA GLU Q 26 -0.059 -7.422 -8.315 1.00 28.73 C </line> <line>ATOM 5166 CA VAL Q 27 3.250 -9.427 -8.257 1.00 25.60 C </line> <line>ATOM 5173 CA ALA Q 28 2.393 -13.027 -9.239 1.00 24.19 C </line> <line>ATOM 5178 CA LEU Q 29 5.712 -14.801 -9.242 1.00 21.09 C </line> </atom-coordinate> <distance-map> <line> LEU ALA VAL GLU VAL GLY ARG SER HIS LEU </line> <line> CA CA CA CA CA CA CA CA CA CA </line> <line>LEU CA 12.88 11.41 7.59 7.42 5.21 6.27 5.10 5.64 3.70 </line> <line>HIS CA 12.83 11.06 7.65 7.11 5.86 5.25 5.31 3.77 </line> <line>SER CA 16.59 14.68 11.27 10.02 7.76 5.44 3.81 </line> <line>ARG CA 16.90 14.60 11.05 9.06 5.73 3.79 </line> <line>GLY CA 15.11 12.26 9.22 6.34 3.81 </line> <line>VAL CA 12.44 9.67 6.48 3.78 </line> <line>GLU CA 9.41 6.19 3.87 </line> <line>VAL CA 5.99 3.83 </line> <line>ALA CA 3.76 </line> <line>LEU CA </line> </distance-map> <n14> <line>LEU CA 401</line> <line>HIS CA 355</line> <line>SER CA 267</line> <line>ARG CA 245</line> <line>GLY CA 228</line> <line>VAL CA 306</line> <line>GLU CA 326</line> <line>VAL CA 439</line> <line>ALA CA 385</line> <line>LEU CA 456</line> </n14> </entryChain> <entryChain> <pdbID>1GD1</pdbID> <pdbChain>O</pdbChain> <entryIDChain>1GD1O</entryIDChain> <sequence>ALKNPDIEVVA</sequence> <secondary-structure>GGG EEE E</secondary-structure> <atom-coordinate> <line>ATOM 145 CA ALA O 19 7.791 -26.542 15.301 1.00 15.04 C </line> <line>ATOM 150 CA LEU O 20 4.885 -28.524 13.804 1.00 15.61 C </line> <line>ATOM 158 CA LYS O 21 7.470 -29.960 11.325 1.00 23.02 C </line> <line>ATOM 167 CA ASN O 22 10.220 -30.634 13.881 1.00 18.48 C </line> <line>ATOM 175 CA PRO O 23 10.611 -34.144 15.156 1.00 26.83 C </line> <line>ATOM 182 CA ASP O 24 12.658 -33.084 18.197 1.00 25.67 C </line> <line>ATOM 190 CA ILE O 25 10.664 -30.375 19.971 1.00 22.17 C </line> <line>ATOM 198 CA GLU O 26 7.004 -30.019 20.945 1.00 24.43 C </line> <line>ATOM 207 CA VAL O 27 5.288 -26.792 21.910 1.00 18.90 C </line> <line>ATOM 214 CA VAL O 28 3.075 -27.482 24.967 1.00 14.92 C </line> <line>ATOM 221 CA ALA O 29 2.130 -24.009 26.183 1.00 12.15 C </line> </atom-coordinate> <distance-map> <line> ALA VAL VAL GLU ILE ASP PRO ASN LYS LEU ALA </line> <line> CA CA CA CA CA CA CA CA CA CA CA </line> <line>ALA CA 12.53 10.80 7.07 6.68 6.69 8.65 8.11 4.97 5.25 3.82 </line> <line>LEU CA 13.46 11.36 8.30 7.60 8.65 10.03 8.14 5.74 3.86 </line> <line>LYS CA 16.87 14.55 11.26 9.63 9.23 9.16 6.48 3.81 </line> <line>ASN CA 16.15 13.56 10.18 7.79 6.11 5.53 3.75 </line> <line>PRO CA 17.21 14.05 11.31 7.97 6.11 3.82 </line> <line>ASP CA 16.03 13.00 10.38 6.99 3.80 </line> <line>ILE CA 12.33 9.54 6.75 3.80 </line> <line>GLU CA 9.34 6.17 3.78 </line> <line>VAL CA 6.00 3.84 </line> <line>VAL CA 3.80 </line> <line>ALA CA </line> </distance-map> <n14> <line>ALA CA 398</line> <line>LEU CA 337</line> <line>LYS CA 255</line> <line>ASN CA 261</line> <line>PRO CA 189</line> <line>ASP CA 248</line> <line>ILE CA 331</line> <line>GLU CA 361</line> <line>VAL CA 454</line> <line>VAL CA 393</line> <line>ALA CA 457</line> </n14> </entryChain> <parallel> <x>-6.379000186920166</x> <y>25.968000411987305</y> <z>-22.01099967956543</z> </parallel> <rotation> <x>-0.18299999833106995</x> <y>0.7620000243186951</y> <z>-0.621999979019165</z> <x>0.9580000042915344</x> <y>-0.004999999888241291</y> <z>-0.2879999876022339</z> <x>-0.22300000488758087</x> <y>-0.6480000019073486</y> <z>-0.7279999852180481</z> </rotation> <rmsd>1.1548500061035156</rmsd> <dmax>2.0533459186553955</dmax> </indel> <indel> <confEVID></confEVID> <index>1</index> <entryChain> <pdbID>1CER</pdbID> <pdbChain>Q</pdbChain> <entryIDChain>1CERQ</entryIDChain> <sequence>TKALG-NMVKV</sequence> <secondary-structure> EEEE-EEEEE</secondary-structure> <atom-coordinate> <line>ATOM 7178 CA THR Q 297 26.891 24.696 -4.144 1.00 14.00 C </line> <line>ATOM 7185 CA LYS Q 298 30.087 26.584 -5.084 1.00 16.91 C </line> <line>ATOM 7194 CA ALA Q 299 30.570 28.710 -8.217 1.00 17.80 C </line> <line>ATOM 7199 CA LEU Q 300 33.711 30.164 -9.670 1.00 15.74 C </line> <line>ATOM 7207 CA GLY Q 302 32.072 32.048 -12.442 1.00 17.67 C </line> <line>ATOM 7211 CA ASN Q 303 31.095 29.450 -14.987 1.00 19.71 C </line> <line>ATOM 7219 CA MET Q 304 32.619 26.450 -13.258 1.00 19.07 C </line> <line>ATOM 7227 CA VAL Q 305 29.858 25.348 -10.881 1.00 16.94 C </line> <line>ATOM 7234 CA LYS Q 306 29.692 22.454 -8.331 1.00 14.58 C </line> <line>ATOM 7243 CA VAL Q 307 26.451 20.789 -7.275 1.00 15.90 C </line> </atom-coordinate> <distance-map> <line> VAL LYS VAL MET ASN GLY LEU ALA LYS THR </line> <line> CA CA CA CA CA CA CA CA CA CA </line> <line>THR CA 5.03 5.51 7.39 10.91 12.56 12.24 10.34 6.80 3.83 </line> <line>LYS CA 7.18 5.27 5.93 8.56 10.36 9.38 6.85 3.82 </line> <line>ALA CA 8.98 6.32 4.35 5.89 6.83 5.59 3.75 </line> <line>LEU CA 12.10 8.80 6.29 5.28 5.97 3.73 </line> <line>GLY CA 13.60 10.71 7.23 5.68 3.77 </line> <line>ASN CA 12.49 9.76 5.93 3.78 </line> <line>MET CA 10.29 6.99 3.81 </line> <line>VAL CA 6.74 3.86 </line> <line>LYS CA 3.79 </line> <line>VAL CA </line> </distance-map> <n14> <line>THR CA 349</line> <line>LYS CA 259</line> <line>ALA CA 265</line> <line>LEU CA 194</line> <line>GLY CA 209</line> <line>ASN CA 248</line> <line>MET CA 282</line> <line>VAL CA 371</line> <line>LYS CA 388</line> <line>VAL CA 474</line> </n14> </entryChain> <entryChain> <pdbID>1GD1</pdbID> <pdbChain>O</pdbChain> <entryIDChain>1GD1O</entryIDChain> <sequence>TMVIDGKMVKV</sequence> <secondary-structure> EEE EEEEE</secondary-structure> <atom-coordinate> <line>ATOM 2238 CA THR O 297 26.416 -9.515 -7.495 1.00 14.34 C </line> <line>ATOM 2245 CA MET O 298 28.761 -6.779 -8.770 1.00 14.37 C </line> <line>ATOM 2253 CA VAL O 299 32.478 -6.011 -8.404 1.00 13.71 C </line> <line>ATOM 2260 CA ILE O 300 34.377 -2.749 -9.006 1.00 23.57 C </line> <line>ATOM 2268 CA ASP O 301 38.221 -2.641 -9.405 1.00 29.75 C </line> <line>ATOM 2276 CA GLY O 302 38.293 -6.334 -8.469 1.00 28.58 C </line> <line>ATOM 2280 CA LYS O 303 38.160 -5.337 -4.762 1.00 24.55 C </line> <line>ATOM 2289 CA MET O 304 34.794 -3.716 -3.939 1.00 17.09 C </line> <line>ATOM 2297 CA VAL O 305 31.845 -6.205 -4.005 1.00 17.78 C </line> <line>ATOM 2304 CA LYS O 306 28.080 -5.818 -3.693 1.00 12.45 C </line> <line>ATOM 2313 CA VAL O 307 26.183 -8.954 -2.451 1.00 13.08 C </line> </atom-coordinate> <distance-map> <line> VAL LYS VAL MET LYS GLY ASP ILE VAL MET THR </line> <line> CA CA CA CA CA CA CA CA CA CA CA </line> <line>THR CA 5.08 5.56 7.25 10.79 12.76 12.33 13.79 10.56 7.06 3.82 </line> <line>MET CA 7.16 5.21 5.70 8.31 10.32 9.55 10.34 6.92 3.81 </line> <line>VAL CA 9.15 6.45 4.45 5.53 6.78 5.82 6.73 3.82 </line> <line>ILE CA 12.19 8.79 6.59 5.18 6.25 5.34 3.87 </line> <line>ASP CA 15.27 12.06 9.08 6.54 5.37 3.81 </line> <line>GLY CA 13.77 11.29 7.84 6.29 3.84 </line> <line>LYS CA 12.72 10.15 6.42 3.83 </line> <line>MET CA 10.19 7.04 3.86 </line> <line>VAL CA 6.48 3.80 </line> <line>LYS CA 3.87 </line> <line>VAL CA </line> </distance-map> <n14> <line>THR CA 354</line> <line>MET CA 281</line> <line>VAL CA 270</line> <line>ILE CA 203</line> <line>ASP CA 166</line> <line>GLY CA 218</line> <line>LYS CA 258</line> <line>MET CA 287</line> <line>VAL CA 381</line> <line>LYS CA 381</line> <line>VAL CA 478</line> </n14> </entryChain> <parallel> <x>-2.2690000534057617</x> <y>33.29999923706055</y> <z>-2.861999988555908</z> </parallel> <rotation> <x>-0.05000000074505806</x> <y>0.6039999723434448</y> <z>-0.7950000166893005</z> <x>0.9980000257492065</x> <y>0.007000000216066837</y> <z>-0.057999998331069946</z> <x>-0.028999999165534973</x> <y>-0.796999990940094</y> <z>-0.6039999723434448</z> </rotation> <rmsd>0.7219759821891785</rmsd> <dmax>1.6196149587631226</dmax> </indel> |