NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | 利用許諾 | ヘルプ
タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
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Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
1CESA-1ONAD
confEVID 1CESA-1ONAD
pdbIDA 1CES
pdbIDB 1ONA
pdbChainA A
pdbChainB D
identity 0.915600001811981
indelSize 1
alignment <alignment>
<seq1>ADTIVAVELDTY-------PNYPHIGIDIKSVRSKKTAKWNMQNGKVGTAHIIYNSVDKRLSAVVSYPNADSATVSYDVDLDNVLPEWVRVGLSASTGLYKETNTILSWSFTSKLKSNSTHETNALHFMFNQFSKDQKDLILQGDATTGTDGNLELTRVSSG-----SSVGRALFYAPVHIWESSAVVASFEATFTFLIKSPDSHPADGIAFFISNIDSSIPSGSTGRLLGLFPDAN</seq1>
<seq2>ADTIVAVELDTYPNTDIGDPSYPHIGIDIKSVRSKKTAKWNMQNGKVGTAHIIYNSVDKRLSAVVSYPNADSATVSYDVDLDNVLPEWVRVGLSASTGLYKETNTILSWSFTSKLK------TNALHFMFNQFSKDQKDLILQGDATTGTDGNLELTRVSSNGSPQGSSVGRALFYAPVHIWESSAVVASFEATFTFLIKSPDSHPADGIAFFISNIDSSIPSGSTGRLLGLFPDAN</seq2>
<ss_1> EEEEEEE ------- EEEEE EEE EEEEEEEEEE EEEEEEEEE EEEEEEEEEE EEEEEEEEEEE EEEEEEEEEEEEE EEEEEEE EEEEEEEE EEEEGGEEE ----- EEEEEE EEEEEEEEEEEE EEEEEEEEEE GGG </ss_1>
<ss_2> EEEEEEEE EEEEE EEE EEEEEEEEEE EEEEEEEEE EEEEEEEEEE EEEEEEEEEE EEEEEEEEEEE ------ EEEEEEE EEEEEEE EEE EE EEEEEE EEEEEEEEEEEE EEEEEEEE GGG </ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>1CES</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1CESA</entryIDChain>
<sequence>RVSSG-----SSVGR</sequence>
<secondary-structure> ----- EEEE</secondary-structure>
<atom-coordinate>
<line>ATOM 1160 CA ARG A 158 22.565 9.582 46.566 1.00 42.20 C </line>
<line>ATOM 1171 CA VAL A 159 20.646 8.113 49.442 1.00 55.02 C </line>
<line>ATOM 1178 CA SER A 160 22.258 8.130 52.906 1.00 77.35 C </line>
<line>ATOM 1185 CA GLY A 167 24.503 16.989 50.926 1.00 51.94 C </line>
<line>ATOM 1189 CA SER A 168 24.889 18.500 47.457 1.00 39.30 C </line>
<line>ATOM 1195 CA SER A 169 24.242 15.618 45.105 1.00 29.48 C </line>
<line>ATOM 1201 CA VAL A 170 23.249 15.556 41.423 1.00 22.18 C </line>
<line>ATOM 1208 CA GLY A 171 22.324 12.620 39.277 1.00 20.57 C </line>
<line>ATOM 1212 CA ARG A 172 20.706 11.849 35.951 1.00 8.14 C </line>
</atom-coordinate>
<distance-map>
<line> ARG GLY VAL SER SER GLY SER VAL ARG </line>
<line> CA CA CA CA CA CA CA CA CA </line>
<line>ARG CA 11.01 7.90 7.91 6.43 9.26 8.81 6.51 3.76 </line>
<line>VAL CA 14.00 11.25 11.25 9.38 11.39 9.79 3.82 </line>
<line>SER CA 17.43 14.35 13.71 10.99 12.01 9.35 </line>
<line>GLY CA 16.28 12.63 9.69 5.99 3.80 </line>
<line>SER CA 13.93 10.40 6.91 3.78 </line>
<line>SER CA 10.51 6.83 3.81 </line>
<line>VAL CA 7.08 3.75 </line>
<line>GLY CA 3.78 </line>
<line>ARG CA </line>
</distance-map>
<n14>
<line>ARG CA 312</line>
<line>VAL CA 287</line>
<line>SER CA 193</line>
<line>GLY CA 230</line>
<line>SER CA 276</line>
<line>SER CA 341</line>
<line>VAL CA 403</line>
<line>GLY CA 428</line>
<line>ARG CA 491</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1ONA</pdbID>
<pdbChain>D</pdbChain>
<entryIDChain>1ONAD</entryIDChain>
<sequence>RVSSNGSPQGSSVGR</sequence>
<secondary-structure> EEEE</secondary-structure>
<atom-coordinate>
<line>ATOM 6436 CA ARG D 158 6.660 25.139 54.986 1.00 26.91 C </line>
<line>ATOM 6447 CA VAL D 159 5.254 27.835 52.742 1.00 31.86 C </line>
<line>ATOM 6454 CA SER D 160 3.394 30.807 54.143 1.00 53.44 C </line>
<line>ATOM 6460 CA SER D 161 0.140 32.328 52.723 1.00 69.30 C </line>
<line>ATOM 6466 CA ASN D 162 2.060 34.897 50.602 1.00 69.05 C </line>
<line>ATOM 6474 CA GLY D 163 3.748 31.901 48.986 1.00 55.35 C </line>
<line>ATOM 6478 CA SER D 164 7.073 32.341 50.820 1.00 45.00 C </line>
<line>ATOM 6484 CA PRO D 165 9.178 29.417 51.992 1.00 30.03 C </line>
<line>ATOM 6491 CA GLN D 166 10.196 29.119 55.619 1.00 15.78 C </line>
<line>ATOM 6496 CA GLY D 167 13.653 28.143 56.771 1.00 10.00 C </line>
<line>ATOM 6500 CA SER D 168 14.430 25.205 59.065 1.00 16.93 C </line>
<line>ATOM 6506 CA SER D 169 11.582 23.149 57.585 1.00 11.77 C </line>
<line>ATOM 6512 CA VAL D 170 11.443 19.375 56.854 1.00 8.34 C </line>
<line>ATOM 6519 CA GLY D 171 8.719 17.260 55.282 1.00 4.74 C </line>
<line>ATOM 6523 CA ARG D 172 8.266 13.936 53.506 1.00 5.42 C </line>
</atom-coordinate>
<distance-map>
<line> ARG GLY VAL SER SER GLY GLN PRO SER GLY ASN SER SER VAL ARG </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>ARG CA 11.41 8.15 7.72 5.91 8.78 7.82 5.36 5.80 8.33 9.50 11.64 9.97 6.60 3.78 </line>
<line>VAL CA 14.24 11.41 11.26 9.24 11.45 9.32 5.86 4.30 5.23 5.74 8.04 6.81 3.78 </line>
<line>SER CA 17.57 14.60 14.24 11.73 13.32 10.92 7.16 6.33 5.19 5.28 5.57 3.86 </line>
<line>SER CA 20.12 17.53 17.68 15.45 17.18 14.71 10.95 9.52 7.19 5.21 3.85 </line>
<line>ASN CA 22.05 19.42 19.18 16.66 17.85 14.77 11.17 9.09 5.63 3.80 </line>
<line>GLY CA 19.07 16.69 16.67 14.56 16.14 13.15 9.66 6.69 3.82 </line>
<line>SER CA 18.64 15.81 14.95 12.27 13.15 9.81 6.57 3.79 </line>
<line>PRO CA 15.58 12.60 11.38 8.74 9.76 6.67 3.78 </line>
<line>GLN CA 15.45 11.96 9.90 6.44 6.72 3.77 </line>
<line>GLY CA 15.54 12.04 9.04 5.47 3.81 </line>
<line>SER CA 14.00 10.49 6.91 3.81 </line>
<line>SER CA 10.61 6.94 3.85 </line>
<line>VAL CA 7.13 3.79 </line>
<line>GLY CA 3.80 </line>
<line>ARG CA </line>
</distance-map>
<n14>
<line>ARG CA 355</line>
<line>VAL CA 309</line>
<line>SER CA 203</line>
<line>SER CA 136</line>
<line>ASN CA 121</line>
<line>GLY CA 221</line>
<line>SER CA 252</line>
<line>PRO CA 335</line>
<line>GLN CA 300</line>
<line>GLY CA 312</line>
<line>SER CA 303</line>
<line>SER CA 356</line>
<line>VAL CA 402</line>
<line>GLY CA 441</line>
<line>ARG CA 508</line>
</n14>
</entryChain>
<parallel>
<x>16.214000701904297</x>
<y>-14.20300006866455</y>
<z>-8.199999809265137</z>
</parallel>
<rotation>
<x>-0.16500000655651093</x>
<y>0.671999990940094</y>
<z>-0.722000002861023</z>
<x>0.3619999885559082</x>
<y>0.722000002861023</y>
<z>0.5889999866485596</z>
<x>0.9169999957084656</x>
<y>-0.164000004529953</y>
<z>-0.3619999885559082</z>
</rotation>
<rmsd>5.5897321701049805</rmsd>
<dmax>9.235271453857422</dmax>
</indel>