NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | 利用許諾 | ヘルプ
タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
1CEVC-2RLAC
confEVID 1CEVC-2RLAC
pdbIDA 1CEV
pdbIDB 2RLA
pdbChainA C
pdbChainB C
identity 0.413100004196167
indelSize 3
alignment <alignment>
<seq1>MKPISIIGVPMDLGQTRRGVDMGPSAMRYAGVIERLERLHYDIEDLGDIPIGKAERLHEQGDSRLRNLKAVAEANEKLAAAVDQVVQRGRFPLVLGGDHSIAIGTLAGVAKHYERLGVIWYDAHGDVNTAETSPSGNIHGMPLAASLGFGHPALTQI---GGYSPKIKPEHVVLIGVRSLDEGEKKFIREKGIKIYTMHEVDRLGMTRVMEETIAYLKERT-DGVHLSLDLDGLDPSDAPGVGTPVIGGLTYRESHLAMEMLAEAQIITSAEFVEVNPILDERN----KTASVAVALMGSLFGEKLM</seq1>
<seq2>-KPIEIIGAPFSKGQPRGGVEKGPAALRKAGLVEKLKETEYNVRDHGDLAFV-DVP-NDSPFQIVKNPRSVGKANEQLAAVVAETQKNGTISVVLGGDHSMAIGSISGHARVHPDLCVIWVDAHTDINTPLTTSSGNLHGQPVAFLLKELKGKFPDVPGFSWVTPCISAKDIVYIGLRDVDPGEHYIIKTLGIKYFSMTEVDKLGIGKVMEETFSYLLGRKKRPIHLSFDVDGLDPVFTPATGTPVVGGLSYREGLYITEEIYKTGLLSGLDIMEVNPTLGKTPEEVTRTVNTAVPLTLSCFGTKR-</seq2>
<ss_1> EEEEEE GGGHHHHHHH HHHHHHH EEE HHHHHHHHHHHHHHHHHHHH EEEE GGHHHHHHHHHGGG EEEEE GGG HHHH --- EEEEEEEE HHHHHHHHH EEEEHHHHHHH HHHHHHHHHHHHH - EEEEEEEGGG HHHHHHHHHHHHH EEEEE ----HHHHHHHHHHHHH </ss_1>
<ss_2>- EEEEE HHHHHHH HHHHHH - - HHHHHHHHHHHHHHHHHHHH EEEE GGGHHHHHHHHHHH EEEE GGG GGG EEEEE HHHHHHHHH HHHHHHH HHHHHHHHHHH EEEEEGGG HHHHHHHHHHHHH EEEEE HHHHHHHHHHHHH -</ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>1CEV</pdbID>
<pdbChain>C</pdbChain>
<entryIDChain>1CEVC</entryIDChain>
<sequence>ALTQI---GGYSP</sequence>
<secondary-structure> --- </secondary-structure>
<atom-coordinate>
<line>ATOM 5704 CA ALA C 153 32.344 25.359 42.195 1.00 27.23 C </line>
<line>ATOM 5709 CA LEU C 154 34.497 22.562 43.563 1.00 22.50 C </line>
<line>ATOM 5717 CA THR C 155 34.101 22.987 47.312 1.00 23.55 C </line>
<line>ATOM 5724 CA GLN C 156 30.322 22.938 47.157 1.00 25.30 C </line>
<line>ATOM 5733 CA ILE C 157 29.894 19.769 45.061 1.00 21.93 C </line>
<line>ATOM 5741 CA GLY C 158 27.254 17.558 46.614 1.00 23.98 C </line>
<line>ATOM 5745 CA GLY C 159 25.630 20.491 48.299 1.00 25.18 C </line>
<line>ATOM 5749 CA TYR C 160 27.983 20.814 51.247 1.00 25.68 C </line>
<line>ATOM 5761 CA SER C 161 31.477 21.451 52.587 1.00 27.81 C </line>
<line>ATOM 5767 CA PRO C 162 33.876 20.572 53.818 1.00 27.74 C </line>
</atom-coordinate>
<distance-map>
<line> PRO SER TYR GLY GLY ILE GLN THR LEU ALA </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>ALA CA 12.66 11.14 11.03 10.30 10.31 6.74 5.88 5.91 3.79 </line>
<line>LEU CA 10.46 9.58 10.22 10.26 9.32 5.59 5.52 3.79 </line>
<line>THR CA 6.94 6.09 7.59 8.89 8.77 5.76 3.78 </line>
<line>GLN CA 7.91 5.75 5.17 5.41 6.22 3.82 </line>
<line>ILE CA 9.65 7.87 6.56 5.40 3.78 </line>
<line>GLY CA 10.24 8.29 5.71 3.75 </line>
<line>GLY CA 9.92 7.31 3.79 </line>
<line>TYR CA 6.43 3.80 </line>
<line>SER CA 2.84 </line>
<line>PRO CA </line>
</distance-map>
<n14>
<line>ALA CA 316</line>
<line>LEU CA 424</line>
<line>THR CA 368</line>
<line>GLN CA 301</line>
<line>ILE CA 363</line>
<line>GLY CA 318</line>
<line>GLY CA 240</line>
<line>TYR CA 257</line>
<line>SER CA 286</line>
<line>PRO CA 332</line>
</n14>
</entryChain>
<entryChain>
<pdbID>2RLA</pdbID>
<pdbChain>C</pdbChain>
<entryIDChain>2RLAC</entryIDChain>
<sequence>KFPDVPGFSWVTP</sequence>
<secondary-structure> </secondary-structure>
<atom-coordinate>
<line>ATOM 5714 CA LYS C 155 47.651 15.547 10.847 1.00 76.36 C </line>
<line>ATOM 5723 CA PHE C 156 48.583 15.568 7.216 1.00 16.35 C </line>
<line>ATOM 5734 CA PRO C 157 51.503 13.473 5.928 1.00163.48 C </line>
<line>ATOM 5741 CA ASP C 158 54.792 15.361 5.933 1.00 52.99 C </line>
<line>ATOM 5749 CA VAL C 159 55.064 17.382 2.737 1.00 81.89 C </line>
<line>ATOM 5756 CA PRO C 160 58.494 17.051 1.071 1.00 75.31 C </line>
<line>ATOM 5763 CA GLY C 161 60.679 20.068 1.823 1.00 30.17 C </line>
<line>ATOM 5767 CA PHE C 162 58.737 21.368 4.729 1.00 16.25 C </line>
<line>ATOM 5778 CA SER C 163 60.695 19.287 7.196 1.00 24.85 C </line>
<line>ATOM 5784 CA TRP C 164 62.837 22.286 8.266 1.00 10.75 C </line>
<line>ATOM 5798 CA VAL C 165 59.469 23.661 9.486 1.00 29.99 C </line>
<line>ATOM 5805 CA THR C 166 58.838 23.461 13.203 1.00 45.77 C </line>
<line>ATOM 5812 CA PRO C 167 55.169 23.864 14.308 1.00 20.00 C </line>
</atom-coordinate>
<distance-map>
<line> PRO THR VAL TRP SER PHE GLY PRO VAL ASP PRO PHE LYS </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>LYS CA 11.73 13.90 14.40 16.81 14.05 13.94 16.48 14.68 11.14 8.67 6.58 3.75 </line>
<line>PHE CA 12.75 14.26 13.75 15.79 12.67 11.96 13.99 11.76 8.08 6.34 3.82 </line>
<line>PRO CA 13.84 14.37 13.41 14.55 10.95 10.77 12.02 9.23 6.18 3.79 </line>
<line>ASP CA 11.94 11.61 10.17 10.87 7.20 7.29 8.59 6.34 3.79 </line>
<line>VAL CA 13.26 12.68 10.22 10.73 7.43 5.77 6.29 3.83 </line>
<line>PRO CA 15.25 13.73 10.74 9.90 6.88 5.66 3.80 </line>
<line>GLY CA 14.16 12.02 8.55 7.15 5.43 3.73 </line>
<line>PHE CA 10.52 8.73 5.33 5.49 3.77 </line>
<line>SER CA 10.10 7.55 5.09 3.84 </line>
<line>TRP CA 9.89 6.46 3.84 </line>
<line>VAL CA 6.46 3.78 </line>
<line>THR CA 3.85 </line>
<line>PRO CA </line>
</distance-map>
<n14>
<line>LYS CA 262</line>
<line>PHE CA 296</line>
<line>PRO CA 243</line>
<line>ASP CA 292</line>
<line>VAL CA 369</line>
<line>PRO CA 297</line>
<line>GLY CA 340</line>
<line>PHE CA 404</line>
<line>SER CA 274</line>
<line>TRP CA 263</line>
<line>VAL CA 359</line>
<line>THR CA 312</line>
<line>PRO CA 355</line>
</n14>
</entryChain>
<parallel>
<x>-24.820999145507812</x>
<y>3.739000082015991</y>
<z>39.22999954223633</z>
</parallel>
<rotation>
<x>-0.8140000104904175</x>
<y>-0.5789999961853027</y>
<z>0.03799999877810478</z>
<x>-0.06499999761581421</x>
<y>0.15700000524520874</y>
<z>0.9850000143051147</z>
<x>-0.5770000219345093</x>
<y>0.800000011920929</y>
<z>-0.16500000655651093</z>
</rotation>
<rmsd>3.782166004180908</rmsd>
<dmax>5.200277805328369</dmax>
</indel>
<indel>
<confEVID></confEVID>
<index>1</index>
<entryChain>
<pdbID>1CEV</pdbID>
<pdbChain>C</pdbChain>
<entryIDChain>1CEVC</entryIDChain>
<sequence>LKERT-DGVHL</sequence>
<secondary-structure>HH - EEEE</secondary-structure>
<atom-coordinate>
<line>ATOM 6192 CA LEU C 214 42.583 7.285 61.814 1.00 28.56 C </line>
<line>ATOM 6200 CA LYS C 215 41.016 4.359 63.668 1.00 37.17 C </line>
<line>ATOM 6209 CA GLU C 216 41.112 6.316 66.923 1.00 46.14 C </line>
<line>ATOM 6218 CA ARG C 217 39.286 9.295 65.447 1.00 37.44 C </line>
<line>ATOM 6229 CA THR C 218 37.013 8.447 62.501 1.00 32.12 C </line>
<line>ATOM 6236 CA ASP C 219 33.887 6.388 61.813 1.00 28.43 C </line>
<line>ATOM 6244 CA GLY C 220 34.772 5.497 58.225 1.00 20.03 C </line>
<line>ATOM 6248 CA VAL C 221 37.910 5.759 56.112 1.00 23.55 C </line>
<line>ATOM 6255 CA HIS C 222 38.203 6.494 52.403 1.00 17.89 C </line>
<line>ATOM 6265 CA LEU C 223 41.238 5.322 50.421 1.00 16.37 C </line>
</atom-coordinate>
<distance-map>
<line> LEU HIS VAL GLY ASP THR ARG GLU LYS LEU </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>LEU CA 11.64 10.41 7.53 8.78 8.74 5.73 5.30 5.40 3.80 </line>
<line>LYS CA 13.28 11.81 8.29 8.36 7.64 5.84 5.52 3.80 </line>
<line>GLU CA 16.53 14.81 11.29 10.79 8.85 6.40 3.79 </line>
<line>ARG CA 15.66 13.39 10.08 9.33 7.13 3.82 </line>
<line>THR CA 13.17 10.35 6.99 5.66 3.81 </line>
<line>ASP CA 13.60 10.35 7.01 3.80 </line>
<line>GLY CA 10.14 6.83 3.79 </line>
<line>VAL CA 6.61 3.79 </line>
<line>HIS CA 3.81 </line>
<line>LEU CA </line>
</distance-map>
<n14>
<line>LEU CA 365</line>
<line>LYS CA 300</line>
<line>GLU CA 220</line>
<line>ARG CA 251</line>
<line>THR CA 299</line>
<line>ASP CA 280</line>
<line>GLY CA 378</line>
<line>VAL CA 480</line>
<line>HIS CA 563</line>
<line>LEU CA 571</line>
</n14>
</entryChain>
<entryChain>
<pdbID>2RLA</pdbID>
<pdbChain>C</pdbChain>
<entryIDChain>2RLAC</entryIDChain>
<sequence>LLGRKKRPIHL</sequence>
<secondary-structure> EE</secondary-structure>
<atom-coordinate>
<line>ATOM 6224 CA LEU C 219 45.705 38.067 22.444 1.00 2.00 C </line>
<line>ATOM 6232 CA LEU C 220 47.510 40.822 24.456 1.00 35.02 C </line>
<line>ATOM 6240 CA GLY C 221 45.291 40.092 27.458 1.00 28.35 C </line>
<line>ATOM 6244 CA ARG C 222 47.604 37.746 29.449 1.00 78.28 C </line>
<line>ATOM 6255 CA LYS C 223 50.809 39.546 28.558 1.00 30.54 C </line>
<line>ATOM 6264 CA LYS C 224 52.041 42.026 26.032 1.00 2.00 C </line>
<line>ATOM 6273 CA ARG C 225 53.867 40.224 23.240 1.00 21.51 C </line>
<line>ATOM 6284 CA PRO C 226 55.279 40.934 19.723 1.00 19.91 C </line>
<line>ATOM 6291 CA ILE C 227 52.622 41.062 17.007 1.00 27.58 C </line>
<line>ATOM 6299 CA HIS C 228 52.926 39.484 13.640 1.00 14.57 C </line>
<line>ATOM 6309 CA LEU C 229 50.276 40.619 11.148 1.00 22.41 C </line>
</atom-coordinate>
<distance-map>
<line> LEU HIS ILE PRO ARG LYS LYS ARG GLY LEU LEU </line>
<line> CA CA CA CA CA CA CA CA CA CA CA </line>
<line>LEU CA 12.45 11.47 9.29 10.36 8.48 8.29 8.10 7.26 5.42 3.86 </line>
<line>LEU CA 13.59 12.17 9.04 9.10 6.50 4.95 5.42 5.87 3.80 </line>
<line>GLY CA 17.06 15.80 12.80 12.66 9.56 7.16 5.65 3.85 </line>
<line>ARG CA 18.72 16.77 13.82 12.79 9.16 7.05 3.78 </line>
<line>LYS CA 17.45 15.07 11.79 10.00 6.17 3.75 </line>
<line>LYS CA 15.05 12.68 9.09 7.17 3.79 </line>
<line>ARG CA 12.62 9.67 6.41 3.86 </line>
<line>PRO CA 9.93 6.68 3.80 </line>
<line>ILE CA 6.33 3.73 </line>
<line>HIS CA 3.81 </line>
<line>LEU CA </line>
</distance-map>
<n14>
<line>LEU CA 350</line>
<line>LEU CA 299</line>
<line>GLY CA 217</line>
<line>ARG CA 167</line>
<line>LYS CA 184</line>
<line>LYS CA 227</line>
<line>ARG CA 299</line>
<line>PRO CA 380</line>
<line>ILE CA 488</line>
<line>HIS CA 553</line>
<line>LEU CA 582</line>
</n14>
</entryChain>
<parallel>
<x>-11.388999938964844</x>
<y>-33.143001556396484</y>
<z>38.020999908447266</z>
</parallel>
<rotation>
<x>-0.9340000152587891</x>
<y>0.17800000309944153</y>
<z>-0.3109999895095825</z>
<x>-0.25099998712539673</x>
<y>-0.9440000057220459</y>
<z>0.21400000154972076</z>
<x>-0.25600001215934753</x>
<y>0.27799999713897705</y>
<z>0.9259999990463257</z>
</rotation>
<rmsd>1.9265730381011963</rmsd>
<dmax>3.4321670532226562</dmax>
</indel>
<indel>
<confEVID></confEVID>
<index>2</index>
<entryChain>
<pdbID>1CEV</pdbID>
<pdbChain>C</pdbChain>
<entryIDChain>1CEVC</entryIDChain>
<sequence>LDERN----KTASV</sequence>
<secondary-structure> ----HHHHH</secondary-structure>
<atom-coordinate>
<line>ATOM 6653 CA LEU C 276 52.869 5.305 29.207 1.00 24.64 C </line>
<line>ATOM 6661 CA ASP C 277 52.116 1.781 30.395 1.00 24.48 C </line>
<line>ATOM 6669 CA GLU C 278 53.915 -1.404 29.342 1.00 31.71 C </line>
<line>ATOM 6678 CA ARG C 279 51.499 -4.180 28.353 1.00 32.68 C </line>
<line>ATOM 6689 CA ASN C 280 48.808 -3.061 30.809 1.00 22.96 C </line>
<line>ATOM 6697 CA LYS C 281 51.280 -3.575 33.644 1.00 25.36 C </line>
<line>ATOM 6706 CA THR C 282 50.098 -0.627 35.795 1.00 19.86 C </line>
<line>ATOM 6713 CA ALA C 283 46.438 -1.545 35.344 1.00 14.03 C </line>
<line>ATOM 6718 CA SER C 284 47.367 -5.092 36.448 1.00 23.22 C </line>
<line>ATOM 6724 CA VAL C 285 49.205 -3.672 39.474 1.00 21.63 C </line>
</atom-coordinate>
<distance-map>
<line> VAL SER ALA THR LYS ASN ARG GLU ASP LEU </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>LEU CA 14.12 13.81 11.22 9.29 10.05 9.44 9.62 6.79 3.79 </line>
<line>ASP CA 10.98 10.32 8.23 6.25 6.32 5.88 6.33 3.81 </line>
<line>GLU CA 11.40 10.34 9.59 7.54 5.49 5.57 3.81 </line>
<line>ARG CA 11.37 9.13 9.02 8.36 5.33 3.81 </line>
<line>ASN CA 8.70 6.16 5.34 5.70 3.80 </line>
<line>LYS CA 6.19 5.05 5.52 3.84 </line>
<line>THR CA 4.86 5.27 3.80 </line>
<line>ALA CA 5.41 3.83 </line>
<line>SER CA 3.81 </line>
<line>VAL CA </line>
</distance-map>
<n14>
<line>LEU CA 273</line>
<line>ASP CA 303</line>
<line>GLU CA 211</line>
<line>ARG CA 195</line>
<line>ASN CA 279</line>
<line>LYS CA 307</line>
<line>THR CA 429</line>
<line>ALA CA 429</line>
<line>SER CA 379</line>
<line>VAL CA 444</line>
</n14>
</entryChain>
<entryChain>
<pdbID>2RLA</pdbID>
<pdbChain>C</pdbChain>
<entryIDChain>2RLAC</entryIDChain>
<sequence>LGKTPEEVTRTVNT</sequence>
<secondary-structure> HHHHHHHH</secondary-structure>
<atom-coordinate>
<line>ATOM 6707 CA LEU C 282 44.681 40.118 -12.633 1.00 92.26 C </line>
<line>ATOM 6715 CA GLY C 283 43.578 43.681 -12.779 1.00 19.45 C </line>
<line>ATOM 6719 CA LYS C 284 41.505 44.360 -15.895 1.00 84.94 C </line>
<line>ATOM 6728 CA THR C 285 42.928 47.849 -16.582 1.00 38.14 C </line>
<line>ATOM 6735 CA PRO C 286 45.676 49.934 -14.951 1.00126.09 C </line>
<line>ATOM 6742 CA GLU C 287 43.174 51.880 -12.821 1.00 22.97 C </line>
<line>ATOM 6751 CA GLU C 288 42.200 48.656 -11.134 1.00 20.74 C </line>
<line>ATOM 6760 CA VAL C 289 45.875 47.944 -10.568 1.00 33.84 C </line>
<line>ATOM 6767 CA THR C 290 46.629 51.593 -9.541 1.00 58.76 C </line>
<line>ATOM 6774 CA ARG C 291 43.801 51.036 -7.071 1.00 36.68 C </line>
<line>ATOM 6785 CA THR C 292 45.137 47.784 -5.507 1.00 54.05 C </line>
<line>ATOM 6792 CA VAL C 293 48.729 48.972 -5.221 1.00 37.73 C </line>
<line>ATOM 6799 CA ASN C 294 47.611 52.303 -3.920 1.00 27.17 C </line>
<line>ATOM 6807 CA THR C 295 45.504 50.870 -1.186 1.00 20.89 C </line>
</atom-coordinate>
<distance-map>
<line> THR ASN VAL THR ARG THR VAL GLU GLU PRO THR LYS GLY LEU </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>LEU CA 15.73 15.26 12.24 10.48 12.28 12.04 8.18 9.02 11.86 10.13 8.86 6.22 3.73 </line>
<line>GLY CA 13.78 13.00 10.57 8.49 9.31 9.08 5.32 5.42 8.21 6.94 5.68 3.80 </line>
<line>LYS CA 16.57 15.61 13.69 11.53 11.30 10.91 7.77 6.45 8.29 7.03 3.83 </line>
<line>THR CA 15.90 14.22 12.81 11.29 10.07 8.79 6.70 5.56 5.52 3.82 </line>
<line>PRO CA 13.80 11.45 10.24 9.70 8.17 5.74 4.82 5.32 3.82 </line>
<line>GLU CA 11.91 9.95 9.85 8.61 5.85 4.77 5.28 3.77 </line>
<line>GLU CA 10.71 9.73 8.81 6.41 4.97 5.55 3.79 </line>
<line>VAL CA 9.83 8.14 6.15 5.12 5.11 3.87 </line>
<line>THR CA 8.46 5.75 5.47 5.75 3.80 </line>
<line>ARG CA 6.13 5.10 5.65 3.85 </line>
<line>THR CA 5.32 5.39 3.79 </line>
<line>VAL CA 5.50 3.75 </line>
<line>ASN CA 3.74 </line>
<line>THR CA </line>
</distance-map>
<n14>
<line>LEU CA 302</line>
<line>GLY CA 272</line>
<line>LYS CA 184</line>
<line>THR CA 152</line>
<line>PRO CA 192</line>
<line>GLU CA 178</line>
<line>GLU CA 241</line>
<line>VAL CA 308</line>
<line>THR CA 280</line>
<line>ARG CA 304</line>
<line>THR CA 428</line>
<line>VAL CA 434</line>
<line>ASN CA 366</line>
<line>THR CA 427</line>
</n14>
</entryChain>
<parallel>
<x>6.374000072479248</x>
<y>-47.630001068115234</y>
<z>42.941001892089844</z>
</parallel>
<rotation>
<x>-0.9539999961853027</x>
<y>0.27300000190734863</y>
<z>-0.12700000405311584</z>
<x>-0.2930000126361847</x>
<y>-0.9399999976158142</y>
<z>0.1770000010728836</z>
<x>-0.07100000232458115</x>
<y>0.20600000023841858</y>
<z>0.9760000109672546</z>
</rotation>
<rmsd>2.173490047454834</rmsd>
<dmax>3.325524091720581</dmax>
</indel>