NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | 利用許諾 | ヘルプ
タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
1CEVD-2RLAB
confEVID 1CEVD-2RLAB
pdbIDA 1CEV
pdbIDB 2RLA
pdbChainA D
pdbChainB B
identity 0.413100004196167
indelSize 3
alignment <alignment>
<seq1>MKPISIIGVPMDLGQTRRGVDMGPSAMRYAGVIERLERLHYDIEDLGDIPIGKAERLHEQGDSRLRNLKAVAEANEKLAAAVDQVVQRGRFPLVLGGDHSIAIGTLAGVAKHYERLGVIWYDAHGDVNTAETSPSGNIHGMPLAASLGFGHPALTQI---GGYSPKIKPEHVVLIGVRSLDEGEKKFIREKGIKIYTMHEVDRLGMTRVMEETIAYLKERT-DGVHLSLDLDGLDPSDAPGVGTPVIGGLTYRESHLAMEMLAEAQIITSAEFVEVNPILDERN----KTASVAVALMGSLFGEKLM</seq1>
<seq2>-KPIEIIGAPFSKGQPRGGVEKGPAALRKAGLVEKLKETEYNVRDHGDLAFV-DVP-NDSPFQIVKNPRSVGKANEQLAAVVAETQKNGTISVVLGGDHSMAIGSISGHARVHPDLCVIWVDAHTDINTPLTTSSGNLHGQPVAFLLKELKGKFPDVPGFSWVTPCISAKDIVYIGLRDVDPGEHYIIKTLGIKYFSMTEVDKLGIGKVMEETFSYLLGRKKRPIHLSFDVDGLDPVFTPATGTPVVGGLSYREGLYITEEIYKTGLLSGLDIMEVNPTLGKTPEEVTRTVNTAVPLTLSCFGTKR-</seq2>
<ss_1> EEEEEE GGGHHHHHHH HHHHHHH EEE HHHHHHHHHHHHHHHHHHHH EEEE GGHHHHHHHHHGGG EEEEE GGG HHHH --- EEEEEEEE HHHHHHHHH EEEEHHHHHHH HHHHHHHHHHHHH - EEEEEEEGGG HHHHHHHHHHHHH EEEEE ----HHHHHHHHHHHHH </ss_1>
<ss_2>- EEEEE HHHHHHH HHHHHH - - HHHHHHHHHHHHHHHHHHHH EEEE GGGHHHHHHHHHHH EEEE GGG GGG EEEEE HHHHHHHHH HHHHHHH HHHHHHHHHHH EEEEEGGG HHHHHHHHHHHHH EEEEE HHHHHHHHHHHHH -</ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>1CEV</pdbID>
<pdbChain>D</pdbChain>
<entryIDChain>1CEVD</entryIDChain>
<sequence>ALTQI---GGYSP</sequence>
<secondary-structure> --- </secondary-structure>
<atom-coordinate>
<line>ATOM 7981 CA ALA D 153 49.054 -36.643 87.473 1.00 44.92 C </line>
<line>ATOM 7986 CA LEU D 154 49.605 -33.213 85.940 1.00 39.99 C </line>
<line>ATOM 7994 CA THR D 155 49.382 -33.933 82.198 1.00 44.92 C </line>
<line>ATOM 8001 CA GLN D 156 46.035 -35.682 82.495 1.00 50.31 C </line>
<line>ATOM 8010 CA ILE D 157 44.203 -33.052 84.582 1.00 47.55 C </line>
<line>ATOM 8018 CA GLY D 158 40.748 -32.435 83.137 1.00 52.84 C </line>
<line>ATOM 8022 CA GLY D 159 40.767 -35.841 81.544 1.00 56.00 C </line>
<line>ATOM 8026 CA TYR D 160 42.875 -35.102 78.492 1.00 50.98 C </line>
<line>ATOM 8038 CA SER D 161 46.204 -34.036 77.024 1.00 52.34 C </line>
<line>ATOM 8044 CA PRO D 162 47.838 -32.106 75.681 1.00 43.81 C </line>
</atom-coordinate>
<distance-map>
<line> PRO SER TYR GLY GLY ILE GLN THR LEU ALA </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>ALA CA 12.69 11.14 11.01 10.22 10.27 6.69 5.90 5.94 3.80 </line>
<line>LEU CA 10.47 9.58 10.21 10.21 9.32 5.57 5.54 3.82 </line>
<line>THR CA 6.94 6.07 7.58 8.85 8.81 5.77 3.79 </line>
<line>GLN CA 7.90 5.72 5.13 5.36 6.24 3.82 </line>
<line>ILE CA 9.66 7.88 6.56 5.37 3.80 </line>
<line>GLY CA 10.29 8.35 5.76 3.76 </line>
<line>GLY CA 9.92 7.30 3.78 </line>
<line>TYR CA 6.44 3.79 </line>
<line>SER CA 2.86 </line>
<line>PRO CA </line>
</distance-map>
<n14>
<line>ALA CA 326</line>
<line>LEU CA 427</line>
<line>THR CA 366</line>
<line>GLN CA 299</line>
<line>ILE CA 363</line>
<line>GLY CA 320</line>
<line>GLY CA 242</line>
<line>TYR CA 259</line>
<line>SER CA 286</line>
<line>PRO CA 332</line>
</n14>
</entryChain>
<entryChain>
<pdbID>2RLA</pdbID>
<pdbChain>B</pdbChain>
<entryIDChain>2RLAB</entryIDChain>
<sequence>KFPDVPGFSWVTP</sequence>
<secondary-structure> </secondary-structure>
<atom-coordinate>
<line>ATOM 3411 CA LYS B 155 50.241 84.291 14.133 1.00 29.06 C </line>
<line>ATOM 3420 CA PHE B 156 50.628 84.872 10.454 1.00 37.42 C </line>
<line>ATOM 3431 CA PRO B 157 51.363 88.362 9.085 1.00163.90 C </line>
<line>ATOM 3438 CA ASP B 158 48.224 90.303 8.225 1.00 18.52 C </line>
<line>ATOM 3446 CA VAL B 159 47.104 89.363 4.726 1.00 62.45 C </line>
<line>ATOM 3453 CA PRO B 160 46.178 92.411 2.606 1.00 23.70 C </line>
<line>ATOM 3460 CA GLY B 161 42.411 92.886 2.447 1.00 27.99 C </line>
<line>ATOM 3464 CA PHE B 162 41.524 90.731 5.373 1.00 41.25 C </line>
<line>ATOM 3475 CA SER B 163 41.829 93.608 7.801 1.00 21.64 C </line>
<line>ATOM 3481 CA TRP B 164 38.031 94.072 7.976 1.00 34.75 C </line>
<line>ATOM 3495 CA VAL B 165 38.132 90.544 9.475 1.00 20.59 C </line>
<line>ATOM 3502 CA THR B 166 37.738 90.318 13.222 1.00 48.64 C </line>
<line>ATOM 3509 CA PRO B 167 38.838 86.990 14.831 1.00 32.52 C </line>
</atom-coordinate>
<distance-map>
<line> PRO THR VAL TRP SER PHE GLY PRO VAL ASP PRO PHE LYS </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>LYS CA 11.74 13.91 14.40 16.81 14.06 13.94 16.48 14.67 11.14 8.67 6.58 3.74 </line>
<line>PHE CA 12.75 14.26 13.76 15.79 12.68 11.96 13.99 11.76 8.09 6.34 3.82 </line>
<line>PRO CA 13.85 14.37 13.42 14.55 10.96 10.78 12.03 9.23 6.18 3.79 </line>
<line>ASP CA 11.95 11.62 10.17 10.87 7.21 7.29 8.59 6.34 3.79 </line>
<line>VAL CA 13.27 12.68 10.22 10.73 7.44 5.78 6.30 3.83 </line>
<line>PRO CA 15.25 13.72 10.74 9.90 6.88 5.67 3.80 </line>
<line>GLY CA 14.17 12.02 8.55 7.15 5.43 3.74 </line>
<line>PHE CA 10.52 8.72 5.33 5.49 3.78 </line>
<line>SER CA 10.11 7.55 5.09 3.83 </line>
<line>TRP CA 9.89 6.46 3.83 </line>
<line>VAL CA 6.47 3.77 </line>
<line>THR CA 3.86 </line>
<line>PRO CA </line>
</distance-map>
<n14>
<line>LYS CA 262</line>
<line>PHE CA 296</line>
<line>PRO CA 243</line>
<line>ASP CA 292</line>
<line>VAL CA 368</line>
<line>PRO CA 297</line>
<line>GLY CA 340</line>
<line>PHE CA 404</line>
<line>SER CA 275</line>
<line>TRP CA 264</line>
<line>VAL CA 359</line>
<line>THR CA 312</line>
<line>PRO CA 356</line>
</n14>
</entryChain>
<parallel>
<x>-0.36000001430511475</x>
<y>-123.91400146484375</y>
<z>74.24800109863281</z>
</parallel>
<rotation>
<x>0.4950000047683716</x>
<y>0.3499999940395355</y>
<z>0.7950000166893005</z>
<x>-0.8679999709129333</x>
<y>0.14900000393390656</y>
<z>0.4740000069141388</z>
<x>0.04699999839067459</x>
<y>-0.925000011920929</y>
<z>0.3779999911785126</z>
</rotation>
<rmsd>3.806762933731079</rmsd>
<dmax>5.220259189605713</dmax>
</indel>
<indel>
<confEVID></confEVID>
<index>1</index>
<entryChain>
<pdbID>1CEV</pdbID>
<pdbChain>D</pdbChain>
<entryIDChain>1CEVD</entryIDChain>
<sequence>LKERT-DGVHL</sequence>
<secondary-structure>HH - EEEE</secondary-structure>
<atom-coordinate>
<line>ATOM 8469 CA LEU D 214 48.864 -16.516 67.189 1.00 38.04 C </line>
<line>ATOM 8477 CA LYS D 215 46.020 -14.771 65.351 1.00 44.68 C </line>
<line>ATOM 8486 CA GLU D 216 46.932 -16.528 62.116 1.00 50.06 C </line>
<line>ATOM 8495 CA ARG D 217 46.786 -19.978 63.700 1.00 42.80 C </line>
<line>ATOM 8506 CA THR D 218 44.506 -20.229 66.748 1.00 32.05 C </line>
<line>ATOM 8513 CA ASP D 219 40.792 -19.890 67.521 1.00 40.72 C </line>
<line>ATOM 8521 CA GLY D 220 41.246 -18.556 71.045 1.00 35.94 C </line>
<line>ATOM 8525 CA VAL D 221 44.195 -17.240 73.054 1.00 27.49 C </line>
<line>ATOM 8532 CA HIS D 222 44.920 -17.597 76.751 1.00 21.45 C </line>
<line>ATOM 8542 CA LEU D 223 47.067 -15.070 78.593 1.00 23.90 C </line>
</atom-coordinate>
<distance-map>
<line> LEU HIS VAL GLY ASP THR ARG GLU LYS LEU </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>LEU CA 11.63 10.40 7.53 8.78 8.76 5.74 5.34 5.43 3.81 </line>
<line>LYS CA 13.29 11.80 8.29 8.34 7.63 5.83 5.52 3.79 </line>
<line>GLU CA 16.54 14.81 11.30 10.78 8.84 6.41 3.80 </line>
<line>ARG CA 15.68 13.40 10.09 9.31 7.11 3.81 </line>
<line>THR CA 13.17 10.35 6.99 5.65 3.81 </line>
<line>ASP CA 13.61 10.37 7.02 3.80 </line>
<line>GLY CA 10.15 6.85 3.80 </line>
<line>VAL CA 6.61 3.78 </line>
<line>HIS CA 3.79 </line>
<line>LEU CA </line>
</distance-map>
<n14>
<line>LEU CA 366</line>
<line>LYS CA 299</line>
<line>GLU CA 219</line>
<line>ARG CA 251</line>
<line>THR CA 300</line>
<line>ASP CA 281</line>
<line>GLY CA 378</line>
<line>VAL CA 481</line>
<line>HIS CA 562</line>
<line>LEU CA 570</line>
</n14>
</entryChain>
<entryChain>
<pdbID>2RLA</pdbID>
<pdbChain>B</pdbChain>
<entryIDChain>2RLAB</entryIDChain>
<sequence>LLGRKKRPIHL</sequence>
<secondary-structure> EE</secondary-structure>
<atom-coordinate>
<line>ATOM 3921 CA LEU B 219 29.200 72.308 21.828 1.00 7.20 C </line>
<line>ATOM 3929 CA LEU B 220 25.545 72.657 23.008 1.00 78.47 C </line>
<line>ATOM 3937 CA GLY B 221 26.508 71.264 26.418 1.00 23.03 C </line>
<line>ATOM 3941 CA ARG B 222 26.982 74.540 28.377 1.00 94.79 C </line>
<line>ATOM 3952 CA LYS B 223 24.167 76.400 26.672 1.00 43.50 C </line>
<line>ATOM 3961 CA LYS B 224 22.049 76.108 23.586 1.00 43.10 C </line>
<line>ATOM 3970 CA ARG B 225 23.391 78.410 20.892 1.00 23.92 C </line>
<line>ATOM 3981 CA PRO B 226 22.939 79.078 17.116 1.00 31.89 C </line>
<line>ATOM 3988 CA ILE B 227 24.681 76.544 14.893 1.00 2.00 C </line>
<line>ATOM 3996 CA HIS B 228 26.664 77.378 11.850 1.00 41.16 C </line>
<line>ATOM 4006 CA LEU B 229 27.503 74.361 9.669 1.00 26.47 C </line>
</atom-coordinate>
<distance-map>
<line> LEU HIS ILE PRO ARG LYS LYS ARG GLY LEU LEU </line>
<line> CA CA CA CA CA CA CA CA CA CA CA </line>
<line>LEU CA 12.45 11.48 9.30 10.36 8.48 8.29 8.10 7.27 5.42 3.86 </line>
<line>LEU CA 13.59 12.17 9.04 9.10 6.50 4.95 5.42 5.87 3.81 </line>
<line>GLY CA 17.06 15.80 12.81 12.66 9.56 7.17 5.65 3.85 </line>
<line>ARG CA 18.72 16.77 13.82 12.80 9.16 7.05 3.78 </line>
<line>LYS CA 17.45 15.06 11.79 10.00 6.17 3.75 </line>
<line>LYS CA 15.05 12.67 9.09 7.17 3.79 </line>
<line>ARG CA 12.62 9.67 6.41 3.86 </line>
<line>PRO CA 9.93 6.67 3.79 </line>
<line>ILE CA 6.33 3.73 </line>
<line>HIS CA 3.82 </line>
<line>LEU CA </line>
</distance-map>
<n14>
<line>LEU CA 350</line>
<line>LEU CA 299</line>
<line>GLY CA 217</line>
<line>ARG CA 167</line>
<line>LYS CA 184</line>
<line>LYS CA 227</line>
<line>ARG CA 299</line>
<line>PRO CA 382</line>
<line>ILE CA 488</line>
<line>HIS CA 553</line>
<line>LEU CA 582</line>
</n14>
</entryChain>
<parallel>
<x>19.490999221801758</x>
<y>-93.11399841308594</y>
<z>44.689998626708984</z>
</parallel>
<rotation>
<x>0.9440000057220459</x>
<y>-0.23600000143051147</y>
<z>0.23000000417232513</z>
<x>-0.30799999833106995</x>
<y>-0.8820000290870667</y>
<z>0.35600000619888306</z>
<x>0.11900000274181366</x>
<y>-0.40700000524520874</y>
<z>-0.9049999713897705</z>
</rotation>
<rmsd>1.9302949905395508</rmsd>
<dmax>3.4442501068115234</dmax>
</indel>
<indel>
<confEVID></confEVID>
<index>2</index>
<entryChain>
<pdbID>1CEV</pdbID>
<pdbChain>D</pdbChain>
<entryIDChain>1CEVD</entryIDChain>
<sequence>LDERN----KTASV</sequence>
<secondary-structure> ----HHHHH</secondary-structure>
<atom-coordinate>
<line>ATOM 8930 CA LEU D 276 57.876 -8.850 99.339 1.00 23.83 C </line>
<line>ATOM 8938 CA ASP D 277 55.499 -6.156 98.112 1.00 24.31 C </line>
<line>ATOM 8946 CA GLU D 278 55.546 -2.476 99.050 1.00 25.95 C </line>
<line>ATOM 8955 CA ARG D 279 52.122 -1.187 100.114 1.00 25.83 C </line>
<line>ATOM 8966 CA ASN D 280 50.262 -3.546 97.784 1.00 25.11 C </line>
<line>ATOM 8974 CA LYS D 281 52.087 -2.001 94.828 1.00 28.05 C </line>
<line>ATOM 8983 CA THR D 282 52.417 -5.200 92.785 1.00 20.86 C </line>
<line>ATOM 8990 CA ALA D 283 48.745 -6.083 93.382 1.00 19.04 C </line>
<line>ATOM 8995 CA SER D 284 47.863 -2.573 92.166 1.00 18.60 C </line>
<line>ATOM 9001 CA VAL D 285 50.049 -3.089 89.113 1.00 20.36 C </line>
</atom-coordinate>
<distance-map>
<line> VAL SER ALA THR LYS ASN ARG GLU ASP LEU </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>LEU CA 14.11 13.82 11.25 9.28 10.04 9.41 9.61 6.79 3.80 </line>
<line>ASP CA 10.96 10.32 8.25 6.23 6.30 5.86 6.33 3.80 </line>
<line>GLU CA 11.37 10.32 9.56 7.51 5.48 5.54 3.81 </line>
<line>ARG CA 11.36 9.12 8.98 8.36 5.35 3.80 </line>
<line>ASN CA 8.69 6.19 5.30 5.69 3.80 </line>
<line>LYS CA 6.16 5.03 5.47 3.81 </line>
<line>THR CA 4.85 5.29 3.82 </line>
<line>ALA CA 5.37 3.82 </line>
<line>SER CA 3.79 </line>
<line>VAL CA </line>
</distance-map>
<n14>
<line>LEU CA 272</line>
<line>ASP CA 302</line>
<line>GLU CA 211</line>
<line>ARG CA 195</line>
<line>ASN CA 279</line>
<line>LYS CA 308</line>
<line>THR CA 429</line>
<line>ALA CA 427</line>
<line>SER CA 379</line>
<line>VAL CA 444</line>
</n14>
</entryChain>
<entryChain>
<pdbID>2RLA</pdbID>
<pdbChain>B</pdbChain>
<entryIDChain>2RLAB</entryIDChain>
<sequence>LGKTPEEVTRTVNT</sequence>
<secondary-structure> HHHHHHHH</secondary-structure>
<atom-coordinate>
<line>ATOM 4404 CA LEU B 282 36.004 68.298 -12.425 1.00104.04 C </line>
<line>ATOM 4412 CA GLY B 283 33.502 65.591 -13.000 1.00 51.06 C </line>
<line>ATOM 4416 CA LYS B 284 34.600 63.263 -15.803 1.00 24.59 C </line>
<line>ATOM 4425 CA THR B 285 31.112 62.762 -17.308 1.00 39.34 C </line>
<line>ATOM 4432 CA PRO B 286 27.679 64.237 -16.535 1.00 95.06 C </line>
<line>ATOM 4439 CA GLU B 287 26.684 61.238 -14.392 1.00 43.47 C </line>
<line>ATOM 4448 CA GLU B 288 29.502 62.057 -12.035 1.00 56.98 C </line>
<line>ATOM 4457 CA VAL B 289 28.279 65.645 -11.965 1.00 21.10 C </line>
<line>ATOM 4464 CA THR B 290 24.572 64.582 -11.725 1.00 2.00 C </line>
<line>ATOM 4471 CA ARG B 291 25.794 62.539 -8.766 1.00 2.00 C </line>
<line>ATOM 4482 CA THR B 292 27.587 65.386 -6.905 1.00 24.70 C </line>
<line>ATOM 4489 CA VAL B 293 24.844 67.950 -7.419 1.00 38.07 C </line>
<line>ATOM 4496 CA ASN B 294 22.215 65.428 -6.548 1.00 33.27 C </line>
<line>ATOM 4504 CA THR B 295 23.785 64.459 -3.297 1.00 20.30 C </line>
</atom-coordinate>
<distance-map>
<line> THR ASN VAL THR ARG THR VAL GLU GLU PRO THR LYS GLY LEU </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>LEU CA 15.73 15.26 12.24 10.48 12.28 12.04 8.18 9.02 11.86 10.13 8.86 6.22 3.73 </line>
<line>GLY CA 13.78 13.00 10.57 8.50 9.31 9.08 5.32 5.42 8.21 6.95 5.68 3.81 </line>
<line>LYS CA 16.58 15.61 13.69 11.53 11.30 10.91 7.77 6.45 8.29 7.03 3.83 </line>
<line>THR CA 15.90 14.21 12.81 11.29 10.06 8.79 6.70 5.56 5.52 3.82 </line>
<line>PRO CA 13.80 11.45 10.24 9.70 8.17 5.74 4.82 5.32 3.82 </line>
<line>GLU CA 11.91 9.95 9.85 8.61 5.84 4.77 5.28 3.76 </line>
<line>GLU CA 10.71 9.72 8.82 6.41 4.97 5.55 3.79 </line>
<line>VAL CA 9.84 8.13 6.15 5.11 5.10 3.86 </line>
<line>THR CA 8.47 5.75 5.47 5.74 3.80 </line>
<line>ARG CA 6.13 5.11 5.66 3.84 </line>
<line>THR CA 5.32 5.38 3.79 </line>
<line>VAL CA 5.50 3.75 </line>
<line>ASN CA 3.74 </line>
<line>THR CA </line>
</distance-map>
<n14>
<line>LEU CA 302</line>
<line>GLY CA 273</line>
<line>LYS CA 184</line>
<line>THR CA 152</line>
<line>PRO CA 191</line>
<line>GLU CA 178</line>
<line>GLU CA 241</line>
<line>VAL CA 308</line>
<line>THR CA 280</line>
<line>ARG CA 303</line>
<line>THR CA 428</line>
<line>VAL CA 434</line>
<line>ASN CA 365</line>
<line>THR CA 427</line>
</n14>
</entryChain>
<parallel>
<x>22.929000854492188</x>
<y>-69.44100189208984</y>
<z>109.19400024414062</z>
</parallel>
<rotation>
<x>0.9330000281333923</x>
<y>-0.20200000703334808</y>
<z>0.296999990940094</z>
<x>-0.26100000739097595</x>
<y>-0.9490000009536743</y>
<z>0.17499999701976776</z>
<x>0.2460000067949295</x>
<y>-0.2409999966621399</y>
<z>-0.9390000104904175</z>
</rotation>
<rmsd>2.181049108505249</rmsd>
<dmax>3.3100109100341797</dmax>
</indel>