NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | 利用許諾 | ヘルプ
タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
1CEVF-2RLAA
confEVID 1CEVF-2RLAA
pdbIDA 1CEV
pdbIDB 2RLA
pdbChainA F
pdbChainB A
identity 0.413100004196167
indelSize 3
alignment <alignment>
<seq1>MKPISIIGVPMDLGQTRRGVDMGPSAMRYAGVIERLERLHYDIEDLGDIPIGKAERLHEQGDSRLRNLKAVAEANEKLAAAVDQVVQRGRFPLVLGGDHSIAIGTLAGVAKHYERLGVIWYDAHGDVNTAETSPSGNIHGMPLAASLGFGHPALTQI---GGYSPKIKPEHVVLIGVRSLDEGEKKFIREKGIKIYTMHEVDRLGMTRVMEETIAYLKERT-DGVHLSLDLDGLDPSDAPGVGTPVIGGLTYRESHLAMEMLAEAQIITSAEFVEVNPILDERN----KTASVAVALMGSLFGEKLM</seq1>
<seq2>-KPIEIIGAPFSKGQPRGGVEKGPAALRKAGLVEKLKETEYNVRDHGDLAFV-DVP-NDSPFQIVKNPRSVGKANEQLAAVVAETQKNGTISVVLGGDHSMAIGSISGHARVHPDLCVIWVDAHTDINTPLTTSSGNLHGQPVAFLLKELKGKFPDVPGFSWVTPCISAKDIVYIGLRDVDPGEHYIIKTLGIKYFSMTEVDKLGIGKVMEETFSYLLGRKKRPIHLSFDVDGLDPVFTPATGTPVVGGLSYREGLYITEEIYKTGLLSGLDIMEVNPTLGKTPEEVTRTVNTAVPLTLSCFGTKR-</seq2>
<ss_1> EEEEEE GGGHHHHHHH HHHHHHH EEE HHHHHHHHHHHHHHHHHHHH EEEE GGHHHHHHHHHGGG EEEEE GGG HHHH --- EEEEEEEE HHHHHHHHH EEEEHHHHHHH HHHHHHHHHHHHH - EEEEEEEGGG HHHHHHHHHHHHH EEEEE ----HHHHHHHHHHHHH </ss_1>
<ss_2>- EEEEE HHHHHHH HHHHHH - - HHHHHHHHHHHHHHHHHHHH EEEE GGGHHHHHHHHHHH EEEE GGG GGG EEEEE HHHHHHHHH HHHHHHH HHHHHHHHHHH EEEEEGGG HHHHHHHHHHHHH EEEEE HHHHHHHHHHHHH -</ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>1CEV</pdbID>
<pdbChain>F</pdbChain>
<entryIDChain>1CEVF</entryIDChain>
<sequence>ALTQI---GGYSP</sequence>
<secondary-structure> --- </secondary-structure>
<atom-coordinate>
<line>ATOM 12535 CA ALA F 153 104.237 9.432 90.121 1.00 39.99 C </line>
<line>ATOM 12540 CA LEU F 154 101.078 8.133 88.453 1.00 33.70 C </line>
<line>ATOM 12548 CA THR F 155 102.013 8.256 84.750 1.00 40.06 C </line>
<line>ATOM 12555 CA GLN F 156 105.184 6.257 85.245 1.00 44.82 C </line>
<line>ATOM 12564 CA ILE F 157 103.714 3.386 87.293 1.00 42.28 C </line>
<line>ATOM 12572 CA GLY F 158 105.007 0.073 85.951 1.00 50.57 C </line>
<line>ATOM 12576 CA GLY F 159 108.031 1.786 84.494 1.00 50.70 C </line>
<line>ATOM 12580 CA TYR F 160 106.493 3.189 81.339 1.00 41.31 C </line>
<line>ATOM 12592 CA SER F 161 103.974 5.498 79.710 1.00 43.18 C </line>
<line>ATOM 12598 CA PRO F 162 101.577 5.915 78.250 1.00 36.83 C </line>
</atom-coordinate>
<distance-map>
<line> PRO SER TYR GLY GLY ILE GLN THR LEU ALA </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>ALA CA 12.66 11.13 11.01 10.22 10.27 6.70 5.90 5.93 3.80 </line>
<line>LEU CA 10.45 9.58 10.22 10.21 9.31 5.55 5.54 3.82 </line>
<line>THR CA 6.92 6.07 7.57 8.84 8.80 5.75 3.78 </line>
<line>GLN CA 7.88 5.72 5.14 5.35 6.23 3.82 </line>
<line>ILE CA 9.63 7.88 6.57 5.39 3.80 </line>
<line>GLY CA 10.26 8.33 5.76 3.77 </line>
<line>GLY CA 9.88 7.29 3.78 </line>
<line>TYR CA 6.41 3.79 </line>
<line>SER CA 2.84 </line>
<line>PRO CA </line>
</distance-map>
<n14>
<line>ALA CA 321</line>
<line>LEU CA 425</line>
<line>THR CA 365</line>
<line>GLN CA 299</line>
<line>ILE CA 364</line>
<line>GLY CA 319</line>
<line>GLY CA 242</line>
<line>TYR CA 258</line>
<line>SER CA 285</line>
<line>PRO CA 333</line>
</n14>
</entryChain>
<entryChain>
<pdbID>2RLA</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>2RLAA</entryIDChain>
<sequence>KFPDVPGFSWVTP</sequence>
<secondary-structure> </secondary-structure>
<atom-coordinate>
<line>ATOM 1108 CA LYS A 155 -10.362 52.799 4.299 1.00116.46 C </line>
<line>ATOM 1117 CA PHE A 156 -10.144 52.778 0.560 1.00 25.92 C </line>
<line>ATOM 1128 CA PRO A 157 -13.108 51.669 -1.575 1.00 39.79 C </line>
<line>ATOM 1135 CA ASP A 158 -13.053 47.962 -2.373 1.00114.36 C </line>
<line>ATOM 1143 CA VAL A 159 -10.877 47.383 -5.420 1.00 12.34 C </line>
<line>ATOM 1150 CA PRO A 160 -12.506 45.035 -7.969 1.00 18.33 C </line>
<line>ATOM 1157 CA GLY A 161 -11.085 41.519 -7.700 1.00 27.16 C </line>
<line>ATOM 1161 CA PHE A 162 -9.554 41.872 -4.301 1.00 10.69 C </line>
<line>ATOM 1172 CA SER A 163 -12.726 40.767 -2.573 1.00 41.89 C </line>
<line>ATOM 1178 CA TRP A 164 -11.363 37.238 -1.981 1.00 86.82 C </line>
<line>ATOM 1192 CA VAL A 165 -8.790 39.094 0.172 1.00 54.61 C </line>
<line>ATOM 1199 CA THR A 166 -9.321 38.936 3.910 1.00 71.84 C </line>
<line>ATOM 1206 CA PRO A 167 -7.423 41.564 5.991 1.00 11.02 C </line>
</atom-coordinate>
<distance-map>
<line> PRO THR VAL TRP SER PHE GLY PRO VAL ASP PRO PHE LYS </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>LYS CA 11.74 13.91 14.40 16.81 14.06 13.93 16.48 14.68 11.14 8.67 6.58 3.75 </line>
<line>PHE CA 12.75 14.27 13.76 15.79 12.68 11.95 14.00 11.76 8.09 6.34 3.82 </line>
<line>PRO CA 13.84 14.37 13.41 14.54 10.95 10.77 12.03 9.23 6.18 3.79 </line>
<line>ASP CA 11.94 11.61 10.16 10.86 7.21 7.28 8.59 6.34 3.79 </line>
<line>VAL CA 13.27 12.68 10.21 10.72 7.44 5.78 6.30 3.83 </line>
<line>PRO CA 15.26 13.73 10.74 9.90 6.88 5.67 3.80 </line>
<line>GLY CA 14.17 12.02 8.55 7.15 5.44 3.74 </line>
<line>PHE CA 10.51 8.72 5.32 5.49 3.78 </line>
<line>SER CA 10.10 7.55 5.08 3.83 </line>
<line>TRP CA 9.89 6.46 3.83 </line>
<line>VAL CA 6.47 3.78 </line>
<line>THR CA 3.85 </line>
<line>PRO CA </line>
</distance-map>
<n14>
<line>LYS CA 262</line>
<line>PHE CA 296</line>
<line>PRO CA 243</line>
<line>ASP CA 292</line>
<line>VAL CA 368</line>
<line>PRO CA 297</line>
<line>GLY CA 340</line>
<line>PHE CA 404</line>
<line>SER CA 274</line>
<line>TRP CA 263</line>
<line>VAL CA 359</line>
<line>THR CA 311</line>
<line>PRO CA 355</line>
</n14>
</entryChain>
<parallel>
<x>115.77300262451172</x>
<y>-41.14699935913086</y>
<z>87.06700134277344</z>
</parallel>
<rotation>
<x>-0.14399999380111694</x>
<y>0.4440000057220459</y>
<z>-0.8849999904632568</z>
<x>-0.6399999856948853</x>
<y>0.6399999856948853</y>
<z>0.42500001192092896</z>
<x>0.7549999952316284</x>
<y>0.6269999742507935</y>
<z>0.19200000166893005</z>
</rotation>
<rmsd>3.800765037536621</rmsd>
<dmax>5.2184600830078125</dmax>
</indel>
<indel>
<confEVID></confEVID>
<index>1</index>
<entryChain>
<pdbID>1CEV</pdbID>
<pdbChain>F</pdbChain>
<entryIDChain>1CEVF</entryIDChain>
<sequence>LKERT-DGVHL</sequence>
<secondary-structure>HH - EEEE</secondary-structure>
<atom-coordinate>
<line>ATOM 13023 CA LEU F 214 88.074 -1.177 69.081 1.00 31.65 C </line>
<line>ATOM 13031 CA LYS F 215 88.095 -4.550 67.311 1.00 33.64 C </line>
<line>ATOM 13040 CA GLU F 216 89.326 -2.934 64.087 1.00 38.03 C </line>
<line>ATOM 13049 CA ARG F 217 92.280 -1.260 65.818 1.00 35.17 C </line>
<line>ATOM 13060 CA THR F 218 93.493 -3.091 68.952 1.00 31.98 C </line>
<line>ATOM 13067 CA ASP F 219 95.029 -6.441 69.885 1.00 29.91 C </line>
<line>ATOM 13075 CA GLY F 220 93.431 -6.696 73.318 1.00 26.25 C </line>
<line>ATOM 13079 CA VAL F 221 90.716 -4.773 75.154 1.00 30.05 C </line>
<line>ATOM 13086 CA HIS F 222 90.502 -3.923 78.848 1.00 22.20 C </line>
<line>ATOM 13096 CA LEU F 223 87.120 -3.321 80.494 1.00 23.12 C </line>
</atom-coordinate>
<distance-map>
<line> LEU HIS VAL GLY ASP THR ARG GLU LYS LEU </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>LEU CA 11.65 10.43 7.54 8.78 8.76 5.75 5.32 5.44 3.81 </line>
<line>LYS CA 13.28 11.80 8.27 8.32 7.63 5.83 5.53 3.81 </line>
<line>GLU CA 16.56 14.84 11.30 10.78 8.86 6.41 3.81 </line>
<line>ARG CA 15.69 13.42 10.10 9.33 7.14 3.83 </line>
<line>THR CA 13.19 10.37 7.00 5.66 3.80 </line>
<line>ASP CA 13.60 10.35 7.01 3.80 </line>
<line>GLY CA 10.13 6.84 3.80 </line>
<line>VAL CA 6.60 3.80 </line>
<line>HIS CA 3.81 </line>
<line>LEU CA </line>
</distance-map>
<n14>
<line>LEU CA 365</line>
<line>LYS CA 300</line>
<line>GLU CA 219</line>
<line>ARG CA 251</line>
<line>THR CA 299</line>
<line>ASP CA 282</line>
<line>GLY CA 377</line>
<line>VAL CA 481</line>
<line>HIS CA 566</line>
<line>LEU CA 572</line>
</n14>
</entryChain>
<entryChain>
<pdbID>2RLA</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>2RLAA</entryIDChain>
<sequence>LLGRKKRPIHL</sequence>
<secondary-structure> EE</secondary-structure>
<atom-coordinate>
<line>ATOM 1618 CA LEU A 219 7.864 40.539 17.071 1.00 15.85 C </line>
<line>ATOM 1626 CA LEU A 220 9.011 37.218 18.646 1.00 34.45 C </line>
<line>ATOM 1634 CA GLY A 221 8.904 38.812 22.102 1.00 31.60 C </line>
<line>ATOM 1638 CA ARG A 222 5.427 37.648 23.273 1.00 55.33 C </line>
<line>ATOM 1649 CA LYS A 223 5.604 34.246 21.630 1.00132.38 C </line>
<line>ATOM 1658 CA LYS A 224 7.604 32.487 18.985 1.00 65.14 C </line>
<line>ATOM 1667 CA ARG A 225 5.676 32.470 15.723 1.00 27.70 C </line>
<line>ATOM 1678 CA PRO A 226 6.238 31.669 11.992 1.00 32.26 C </line>
<line>ATOM 1685 CA ILE A 227 8.112 34.387 10.111 1.00 12.46 C </line>
<line>ATOM 1693 CA HIS A 228 7.201 35.643 6.718 1.00 31.18 C </line>
<line>ATOM 1703 CA LEU A 229 9.893 37.809 5.097 1.00 10.24 C </line>
</atom-coordinate>
<distance-map>
<line> LEU HIS ILE PRO ARG LYS LYS ARG GLY LEU LEU </line>
<line> CA CA CA CA CA CA CA CA CA CA CA </line>
<line>LEU CA 12.45 11.47 9.29 10.35 8.47 8.28 8.09 7.26 5.42 3.85 </line>
<line>LEU CA 13.59 12.17 9.04 9.10 6.50 4.95 5.42 5.87 3.81 </line>
<line>GLY CA 17.06 15.80 12.81 12.66 9.56 7.17 5.65 3.85 </line>
<line>ARG CA 18.72 16.77 13.82 12.79 9.16 7.05 3.78 </line>
<line>LYS CA 17.45 15.06 11.79 10.00 6.17 3.75 </line>
<line>LYS CA 15.05 12.67 9.09 7.17 3.79 </line>
<line>ARG CA 12.62 9.67 6.41 3.86 </line>
<line>PRO CA 9.93 6.67 3.80 </line>
<line>ILE CA 6.33 3.73 </line>
<line>HIS CA 3.82 </line>
<line>LEU CA </line>
</distance-map>
<n14>
<line>LEU CA 350</line>
<line>LEU CA 299</line>
<line>GLY CA 217</line>
<line>ARG CA 167</line>
<line>LYS CA 184</line>
<line>LYS CA 227</line>
<line>ARG CA 299</line>
<line>PRO CA 381</line>
<line>ILE CA 488</line>
<line>HIS CA 553</line>
<line>LEU CA 582</line>
</n14>
</entryChain>
<parallel>
<x>84.20099639892578</x>
<y>-39.73899841308594</y>
<z>51.63199996948242</z>
</parallel>
<rotation>
<x>-0.7080000042915344</x>
<y>-0.6710000038146973</y>
<z>-0.2199999988079071</z>
<x>-0.6809999942779541</x>
<y>0.7310000061988831</y>
<z>-0.04100000113248825</z>
<x>0.18799999356269836</x>
<y>0.12099999934434891</y>
<z>-0.9750000238418579</z>
</rotation>
<rmsd>1.9244420528411865</rmsd>
<dmax>3.4281859397888184</dmax>
</indel>
<indel>
<confEVID></confEVID>
<index>2</index>
<entryChain>
<pdbID>1CEV</pdbID>
<pdbChain>F</pdbChain>
<entryIDChain>1CEVF</entryIDChain>
<sequence>LDERN----KTASV</sequence>
<secondary-structure> ----HHHHH</secondary-structure>
<atom-coordinate>
<line>ATOM 13484 CA LEU F 276 75.175 3.154 100.526 1.00 20.33 C </line>
<line>ATOM 13492 CA ASP F 277 74.120 -0.266 99.287 1.00 16.47 C </line>
<line>ATOM 13500 CA GLU F 278 70.883 -2.069 100.082 1.00 22.51 C </line>
<line>ATOM 13509 CA ARG F 279 71.435 -5.674 101.247 1.00 24.56 C </line>
<line>ATOM 13520 CA ASN F 280 74.535 -6.125 99.068 1.00 20.39 C </line>
<line>ATOM 13528 CA LYS F 281 72.420 -5.362 95.987 1.00 22.58 C </line>
<line>ATOM 13537 CA THR F 282 75.113 -3.497 94.055 1.00 19.04 C </line>
<line>ATOM 13544 CA ALA F 283 77.709 -6.189 94.823 1.00 18.35 C </line>
<line>ATOM 13549 CA SER F 284 75.227 -8.788 93.530 1.00 21.53 C </line>
<line>ATOM 13555 CA VAL F 285 74.696 -6.652 90.412 1.00 20.52 C </line>
</atom-coordinate>
<distance-map>
<line> VAL SER ALA THR LYS ASN ARG GLU ASP LEU </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>LEU CA 14.10 13.84 11.24 9.28 10.04 9.41 9.61 6.77 3.79 </line>
<line>ASP CA 10.95 10.34 8.24 6.23 6.30 5.88 6.35 3.79 </line>
<line>GLU CA 11.36 10.34 9.55 7.50 5.47 5.55 3.83 </line>
<line>ARG CA 11.36 9.14 8.99 8.37 5.36 3.82 </line>
<line>ASN CA 8.67 6.18 5.30 5.69 3.81 </line>
<line>LYS CA 6.16 5.06 5.48 3.80 </line>
<line>THR CA 4.84 5.32 3.82 </line>
<line>ALA CA 5.36 3.82 </line>
<line>SER CA 3.82 </line>
<line>VAL CA </line>
</distance-map>
<n14>
<line>LEU CA 273</line>
<line>ASP CA 303</line>
<line>GLU CA 213</line>
<line>ARG CA 195</line>
<line>ASN CA 279</line>
<line>LYS CA 308</line>
<line>THR CA 429</line>
<line>ALA CA 428</line>
<line>SER CA 379</line>
<line>VAL CA 442</line>
</n14>
</entryChain>
<entryChain>
<pdbID>2RLA</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>2RLAA</entryIDChain>
<sequence>LGKTPEEVTRTVNT</sequence>
<secondary-structure> HHHHHHHH</secondary-structure>
<atom-coordinate>
<line>ATOM 2101 CA LEU A 282 16.386 47.747 -16.263 1.00 25.76 C </line>
<line>ATOM 2109 CA GLY A 283 20.001 46.890 -15.931 1.00 29.56 C </line>
<line>ATOM 2113 CA LYS A 284 22.135 48.935 -18.330 1.00 50.61 C </line>
<line>ATOM 2122 CA THR A 285 24.576 46.119 -19.207 1.00 14.29 C </line>
<line>ATOM 2129 CA PRO A 286 24.766 42.425 -18.285 1.00 11.74 C </line>
<line>ATOM 2136 CA GLU A 287 27.255 43.079 -15.461 1.00 19.38 C </line>
<line>ATOM 2145 CA GLU A 288 24.654 45.174 -13.730 1.00 2.00 C </line>
<line>ATOM 2154 CA VAL A 289 22.176 42.341 -14.220 1.00 28.33 C </line>
<line>ATOM 2161 CA THR A 290 24.771 39.643 -13.258 1.00 9.32 C </line>
<line>ATOM 2168 CA ARG A 291 25.200 41.767 -10.145 1.00 13.96 C </line>
<line>ATOM 2179 CA THR A 292 21.493 41.971 -9.162 1.00 23.83 C </line>
<line>ATOM 2186 CA VAL A 293 20.749 38.306 -9.812 1.00 23.25 C </line>
<line>ATOM 2193 CA ASN A 294 23.906 37.280 -8.093 1.00 2.00 C </line>
<line>ATOM 2201 CA THR A 295 23.193 39.191 -4.957 1.00 5.05 C </line>
</atom-coordinate>
<distance-map>
<line> THR ASN VAL THR ARG THR VAL GLU GLU PRO THR LYS GLY LEU </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>LEU CA 15.73 15.26 12.24 10.48 12.28 12.04 8.18 9.02 11.86 10.13 8.85 6.22 3.73 </line>
<line>GLY CA 13.78 13.00 10.57 8.50 9.31 9.08 5.32 5.43 8.21 6.94 5.68 3.81 </line>
<line>LYS CA 16.58 15.61 13.69 11.53 11.30 10.91 7.77 6.45 8.29 7.02 3.83 </line>
<line>THR CA 15.91 14.22 12.80 11.30 10.07 8.80 6.70 5.56 5.52 3.81 </line>
<line>PRO CA 13.80 11.45 10.24 9.70 8.18 5.75 4.82 5.32 3.82 </line>
<line>GLU CA 11.91 9.96 9.85 8.61 5.85 4.78 5.28 3.76 </line>
<line>GLU CA 10.72 9.73 8.82 6.41 4.98 5.55 3.80 </line>
<line>VAL CA 9.84 8.13 6.14 5.12 5.11 3.87 </line>
<line>THR CA 8.46 5.75 5.46 5.74 3.79 </line>
<line>ARG CA 6.13 5.10 5.65 3.84 </line>
<line>THR CA 5.32 5.38 3.80 </line>
<line>VAL CA 5.51 3.74 </line>
<line>ASN CA 3.74 </line>
<line>THR CA </line>
</distance-map>
<n14>
<line>LEU CA 302</line>
<line>GLY CA 273</line>
<line>LYS CA 184</line>
<line>THR CA 152</line>
<line>PRO CA 191</line>
<line>GLU CA 178</line>
<line>GLU CA 241</line>
<line>VAL CA 308</line>
<line>THR CA 280</line>
<line>ARG CA 304</line>
<line>THR CA 428</line>
<line>VAL CA 434</line>
<line>ASN CA 366</line>
<line>THR CA 427</line>
</n14>
</entryChain>
<parallel>
<x>52.01100158691406</x>
<y>-47.52299880981445</y>
<z>112.7760009765625</z>
</parallel>
<rotation>
<x>-0.6800000071525574</x>
<y>-0.7279999852180481</y>
<z>-0.08399999886751175</z>
<x>-0.7319999933242798</x>
<y>0.671999990940094</y>
<z>0.10700000077486038</z>
<x>-0.020999999716877937</x>
<y>0.1340000033378601</y>
<z>-0.9909999966621399</z>
</rotation>
<rmsd>2.1822569370269775</rmsd>
<dmax>3.3163321018218994</dmax>
</indel>