NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | 利用許諾 | ヘルプ
タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
1CFVH-1QLRB
confEVID 1CFVH-1QLRB
pdbIDA 1CFV
pdbIDB 1QLR
pdbChainA H
pdbChainB B
identity 0.267699986696243
indelSize 2
alignment <alignment>
<seq1>QVQLQESGGGLVNLGGSMTLSCVASGFTFNTYYMSWVRQTPEKTLELVAAINSDGEPIYYPDTLKGRVTISRDNAKKTLYLQMSSLNFEDTALYYCARLN--YAVYGMDYWGQGTTVT-----------------------------------------------------------------------------VSS------------</seq1>
<seq2>EVQLQQWGAGLLKPSETLSLTCAVYGGSFSDYYWSWIRQPPGKGLEWIGEINHSG-STNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARPPHDTSGHYWNYWGQGTLVTVSSGSASAPTLFPLVSCVAVGCLAQDFLPDSITFSWKYKNNSDISSTRGFPSVLRGGKYAATSQVLLPTDEHVVCKVQHPNGNKEKNVPLPV</seq2>
<ss_1> EEEEE EEEE EEEEEEEE GGG EEEEEEEE EEE EEE EEEEEEE EEEEEEE GGG EEEEEEEEE-- EEEE-----------------------------------------------------------------------------EE ------------</ss_1>
<ss_2> EEEEE EEEEEEEE EEEEEE EEEEEEE -EEEEE EEEEEEE EEEEEEE GGG EEEEEEE EEEE EEEEE EEEEEEEEE EEEEEEE EEE EEE EEEEEEEE EEEEEEEEE EEEEE </ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>1CFV</pdbID>
<pdbChain>H</pdbChain>
<entryIDChain>1CFVH</entryIDChain>
<sequence>CARLN--YAVYG</sequence>
<secondary-structure>EEEEE-- </secondary-structure>
<atom-coordinate>
<line>ATOM 1619 CA CYS H 96 74.229 31.617 13.143 1.00 11.29 C </line>
<line>ATOM 1625 CA ALA H 97 72.957 28.294 11.683 1.00 11.29 C </line>
<line>ATOM 1630 CA ARG H 98 70.502 27.563 8.876 1.00 10.91 C </line>
<line>ATOM 1641 CA LEU H 99 67.483 25.365 9.727 1.00 13.06 C </line>
<line>ATOM 1649 CA ASN H 100 66.808 22.415 7.369 1.00 11.20 C </line>
<line>ATOM 1657 CA TYR H 101 63.335 21.058 6.805 1.00 12.02 C </line>
<line>ATOM 1669 CA ALA H 102 64.621 17.491 6.144 1.00 14.23 C </line>
<line>ATOM 1674 CA VAL H 103 66.919 17.516 9.224 1.00 14.62 C </line>
<line>ATOM 1681 CA TYR H 104 64.427 19.421 11.351 1.00 12.59 C </line>
<line>ATOM 1693 CA GLY H 105 67.641 20.964 12.705 1.00 9.34 C </line>
</atom-coordinate>
<distance-map>
<line> GLY TYR VAL ALA TYR ASN LEU ARG ALA CYS </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>CYS CA 12.53 15.75 16.36 18.46 16.44 13.16 9.81 6.97 3.85 </line>
<line>ALA CA 9.11 12.31 12.60 14.73 12.99 9.54 6.51 3.80 </line>
<line>ARG CA 8.15 10.46 10.67 11.98 9.90 6.51 3.83 </line>
<line>LEU CA 5.32 6.88 7.89 9.11 6.66 3.84 </line>
<line>ASN CA 5.59 5.52 5.24 5.53 3.77 </line>
<line>TYR CA 7.30 4.95 5.59 3.85 </line>
<line>ALA CA 8.01 5.56 3.84 </line>
<line>VAL CA 4.95 3.79 </line>
<line>TYR CA 3.81 </line>
<line>GLY CA </line>
</distance-map>
<n14>
<line>CYS CA 494</line>
<line>ALA CA 469</line>
<line>ARG CA 443</line>
<line>LEU CA 370</line>
<line>ASN CA 255</line>
<line>TYR CA 194</line>
<line>ALA CA 128</line>
<line>VAL CA 152</line>
<line>TYR CA 181</line>
<line>GLY CA 249</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1QLR</pdbID>
<pdbChain>B</pdbChain>
<entryIDChain>1QLRB</entryIDChain>
<sequence>CARPPHDTSGHY</sequence>
<secondary-structure>EEE </secondary-structure>
<atom-coordinate>
<line>ATOM 2375 CA CYS B 95 0.064 18.147 42.339 1.00 20.07 C </line>
<line>ATOM 2381 CA ALA B 96 -0.377 17.151 38.692 1.00 18.99 C </line>
<line>ATOM 2386 CA ARG B 97 0.006 14.506 35.997 1.00 20.07 C </line>
<line>ATOM 2397 CA PRO B 98 0.879 14.443 32.304 1.00 22.38 C </line>
<line>ATOM 2404 CA PRO B 99 -1.596 12.851 29.848 1.00 23.85 C </line>
<line>ATOM 2411 CA HIS B 100 0.690 9.959 28.683 1.00 28.42 C </line>
<line>ATOM 2421 CA ASP B 101 3.719 7.966 29.831 1.00 43.97 C </line>
<line>ATOM 2429 CA THR B 102 5.702 8.581 26.668 1.00 49.14 C </line>
<line>ATOM 2436 CA SER B 103 5.498 12.290 26.035 1.00 44.10 C </line>
<line>ATOM 2442 CA GLY B 104 6.049 15.877 26.931 1.00 32.86 C </line>
<line>ATOM 2446 CA HIS B 105 5.837 16.741 30.588 1.00 22.00 C </line>
<line>ATOM 2456 CA TYR B 106 2.912 19.180 30.297 1.00 20.70 C </line>
</atom-coordinate>
<distance-map>
<line> TYR HIS GLY SER THR ASP HIS PRO PRO ARG ALA CYS </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>CYS CA 12.42 13.17 16.68 18.16 19.21 16.54 15.93 13.67 10.73 7.31 3.81 </line>
<line>ALA CA 9.24 10.22 13.46 14.78 15.97 13.40 12.37 9.91 7.05 3.80 </line>
<line>ARG CA 7.92 8.26 10.98 11.59 12.43 9.73 8.64 6.57 3.80 </line>
<line>PRO CA 5.53 5.73 7.59 8.08 9.45 7.49 5.77 3.83 </line>
<line>PRO CA 7.78 8.42 8.72 8.07 9.03 7.22 3.87 </line>
<line>HIS CA 9.62 8.72 8.17 5.96 5.57 3.80 </line>
<line>ASP CA 11.25 9.06 8.74 6.02 3.78 </line>
<line>THR CA 11.55 9.05 7.31 3.77 </line>
<line>SER CA 8.50 6.38 3.74 </line>
<line>GLY CA 5.66 3.76 </line>
<line>HIS CA 3.82 </line>
<line>TYR CA </line>
</distance-map>
<n14>
<line>CYS CA 489</line>
<line>ALA CA 467</line>
<line>ARG CA 436</line>
<line>PRO CA 329</line>
<line>PRO CA 260</line>
<line>HIS CA 237</line>
<line>ASP CA 242</line>
<line>THR CA 174</line>
<line>SER CA 163</line>
<line>GLY CA 180</line>
<line>HIS CA 268</line>
<line>TYR CA 256</line>
</n14>
</entryChain>
<parallel>
<x>66.3290023803711</x>
<y>9.684000015258789</y>
<z>-23.229999542236328</z>
</parallel>
<rotation>
<x>-0.44200000166893005</x>
<y>-0.4480000138282776</y>
<z>0.7770000100135803</z>
<x>0.8830000162124634</x>
<y>-0.36899998784065247</y>
<z>0.28999999165534973</z>
<x>0.15600000321865082</x>
<y>0.8140000104904175</y>
<z>0.5590000152587891</z>
</rotation>
<rmsd>2.0346689224243164</rmsd>
<dmax>3.6213600635528564</dmax>
</indel>
<indel>
<confEVID></confEVID>
<index>1</index>
<entryChain>
<pdbID>1QLR</pdbID>
<pdbChain>B</pdbChain>
<entryIDChain>1QLRB</entryIDChain>
<sequence>INHSG-STNYN</sequence>
<secondary-structure>EE -EEEEE</secondary-structure>
<atom-coordinate>
<line>ATOM 2040 CA ILE B 51 8.767 11.094 40.484 1.00 27.77 C </line>
<line>ATOM 2048 CA ASN B 52 7.521 7.758 39.065 1.00 28.83 C </line>
<line>ATOM 2056 CA HIS B 53 6.386 4.529 40.673 1.00 32.15 C </line>
<line>ATOM 2066 CA SER B 54 9.872 3.065 40.756 1.00 37.97 C </line>
<line>ATOM 2072 CA GLY B 55 11.556 5.908 42.625 1.00 36.03 C </line>
<line>ATOM 2076 CA SER B 56 13.555 7.822 40.005 1.00 35.67 C </line>
<line>ATOM 2082 CA THR B 57 13.128 11.570 40.523 1.00 34.27 C </line>
<line>ATOM 2089 CA ASN B 58 14.131 14.870 38.788 1.00 35.44 C </line>
<line>ATOM 2097 CA TYR B 59 14.391 18.156 40.758 1.00 32.03 C </line>
<line>ATOM 2109 CA ASN B 60 14.498 21.841 39.897 1.00 30.82 C </line>
</atom-coordinate>
<distance-map>
<line> ASN TYR ASN THR SER GLY SER HIS ASN ILE </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>ILE CA 12.19 9.03 6.78 4.39 5.82 6.27 8.11 6.99 3.83 </line>
<line>ASN CA 15.74 12.58 9.71 6.94 6.11 5.69 5.51 3.78 </line>
<line>HIS CA 19.13 15.80 13.06 9.75 7.92 5.70 3.78 </line>
<line>SER CA 19.36 15.75 12.70 9.11 6.06 3.80 </line>
<line>GLY CA 16.43 12.71 10.08 6.24 3.81 </line>
<line>SER CA 14.05 10.40 7.18 3.81 </line>
<line>THR CA 10.38 6.71 3.86 </line>
<line>ASN CA 7.07 3.84 </line>
<line>TYR CA 3.79 </line>
<line>ASN CA </line>
</distance-map>
<n14>
<line>ILE CA 385</line>
<line>ASN CA 351</line>
<line>HIS CA 287</line>
<line>SER CA 215</line>
<line>GLY CA 227</line>
<line>SER CA 220</line>
<line>THR CA 288</line>
<line>ASN CA 278</line>
<line>TYR CA 288</line>
<line>ASN CA 252</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1CFV</pdbID>
<pdbChain>H</pdbChain>
<entryIDChain>1CFVH</entryIDChain>
<sequence>INSDGEPIYYP</sequence>
<secondary-structure>E </secondary-structure>
<atom-coordinate>
<line>ATOM 1253 CA ILE H 51 63.058 32.589 13.769 1.00 11.71 C </line>
<line>ATOM 1261 CA ASN H 52 60.765 31.558 10.926 1.00 13.70 C </line>
<line>ATOM 1269 CA SER H 53 61.138 32.753 7.348 1.00 15.30 C </line>
<line>ATOM 1275 CA ASP H 54 58.278 35.154 8.213 1.00 16.08 C </line>
<line>ATOM 1283 CA GLY H 55 60.418 37.036 10.782 1.00 14.67 C </line>
<line>ATOM 1287 CA GLU H 56 58.584 35.629 13.828 1.00 18.11 C </line>
<line>ATOM 1296 CA PRO H 57 60.700 34.367 16.757 1.00 17.91 C </line>
<line>ATOM 1303 CA ILE H 58 59.879 30.664 17.328 1.00 17.04 C </line>
<line>ATOM 1311 CA TYR H 59 62.216 30.082 20.250 1.00 15.54 C </line>
<line>ATOM 1323 CA TYR H 60 63.987 31.840 23.136 1.00 14.52 C </line>
<line>ATOM 1335 CA PRO H 61 65.327 30.112 26.287 1.00 18.45 C </line>
</atom-coordinate>
<distance-map>
<line> PRO TYR TYR ILE PRO GLU GLY ASP SER ASN ILE </line>
<line> CA CA CA CA CA CA CA CA CA CA CA </line>
<line>ILE CA 12.96 9.44 7.00 5.15 4.20 5.41 5.97 7.77 6.70 3.80 </line>
<line>ASN CA 16.09 12.63 9.55 6.52 6.47 5.45 5.49 5.15 3.79 </line>
<line>SER CA 19.58 16.07 13.22 10.27 9.56 7.54 5.54 3.83 </line>
<line>ASP CA 20.04 16.32 13.64 10.29 8.92 5.64 3.84 </line>
<line>GLY CA 17.68 13.87 11.88 9.15 6.55 3.82 </line>
<line>GLU CA 15.20 11.41 9.23 6.21 3.83 </line>
<line>PRO CA 11.42 7.61 5.73 3.84 </line>
<line>ILE CA 10.50 7.21 3.79 </line>
<line>TYR CA 6.79 3.82 </line>
<line>TYR CA 3.84 </line>
<line>PRO CA </line>
</distance-map>
<n14>
<line>ILE CA 379</line>
<line>ASN CA 321</line>
<line>SER CA 297</line>
<line>ASP CA 215</line>
<line>GLY CA 277</line>
<line>GLU CA 232</line>
<line>PRO CA 285</line>
<line>ILE CA 262</line>
<line>TYR CA 293</line>
<line>TYR CA 280</line>
<line>PRO CA 242</line>
</n14>
</entryChain>
<parallel>
<x>-50.19200134277344</x>
<y>-24.697999954223633</y>
<z>27.19300079345703</z>
</parallel>
<rotation>
<x>-0.5</x>
<y>0.5759999752044678</y>
<z>0.6460000276565552</z>
<x>0.4359999895095825</x>
<y>-0.47699999809265137</y>
<z>0.7630000114440918</z>
<x>0.7480000257492065</x>
<y>0.6629999876022339</y>
<z>-0.013000000268220901</z>
</rotation>
<rmsd>1.6155810356140137</rmsd>
<dmax>2.613809108734131</dmax>
</indel>