NBDC - アーカイブトップ - ヘルプ
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タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
1CG5A-2QU0C
confEVID 1CG5A-2QU0C
pdbIDA 1CG5
pdbIDB 2QU0
pdbChainA A
pdbChainB C
identity 0.436599999666214
indelSize 2
alignment <alignment>
<seq1>VLSSQNKKAIEELGNLIKANAEAWGADALARLFELHPQTKTYFSKFSGFEACNEQVKKHGKRVMNALADATHHLDNLHLHLEDLARKHGENLLVDPHNFHLFADCIVVTLAVNLQA-FTPVTHCAVDKFLELVAYELSSCYR</seq1>
<seq2>VLSAADKSNVKAAWGKVGGNAGAYGAEALERMFLSFPTTKTYFPHF-DLSHGSAQVKGHGEKVAAALTKAVGHLDDLPGTLSDLSDLHAHKLRVDPVNFKLLSHSLLVTLACHLPNDFTPAVHASLDKFLANVSTVLTSKYR</seq2>
<ss_1> HHHHHHHHHHHHHHHH HHHHHHHHHHHHHHH GGGG HHHHHHHHHHHHHHHHGGG HHHH HHHHHHHH HHHHHHHHHHHHHHHH - HHHHHHHHHHHHHHHHGGG </ss_1>
<ss_2> HHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHH GGGG - HHHHHHHHHHHHHHHHHGGG HHHH HHHHIIIIII HHHHHHHHHHHHHH HHHH HHHHHHHHHHHHHHHHHH </ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>1CG5</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1CG5A</entryIDChain>
<sequence>VNLQA-FTPVT</sequence>
<secondary-structure>HH - HHH</secondary-structure>
<atom-coordinate>
<line>ATOM 879 CA VAL A 112 24.668 22.711 12.745 1.00 12.59 C </line>
<line>ATOM 886 CA ASN A 113 26.377 25.743 11.200 1.00 16.93 C </line>
<line>ATOM 894 CA LEU A 114 26.987 28.293 13.964 1.00 19.07 C </line>
<line>ATOM 902 CA GLN A 115 30.151 28.053 16.083 1.00 25.09 C </line>
<line>ATOM 911 CA ALA A 116 28.078 28.536 19.272 1.00 18.36 C </line>
<line>ATOM 916 CA PHE A 117 24.305 28.433 19.853 1.00 11.33 C </line>
<line>ATOM 927 CA THR A 118 23.524 28.885 23.555 1.00 12.89 C </line>
<line>ATOM 934 CA PRO A 119 19.984 28.626 25.024 1.00 9.69 C </line>
<line>ATOM 941 CA VAL A 120 19.731 32.425 25.371 1.00 10.84 C </line>
<line>ATOM 948 CA THR A 121 20.455 32.990 21.656 1.00 11.15 C </line>
</atom-coordinate>
<distance-map>
<line> THR VAL PRO THR PHE ALA GLN LEU ASN VAL </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>VAL CA 14.24 16.68 14.41 12.50 9.13 9.39 8.35 6.17 3.81 </line>
<line>ASN CA 14.03 17.02 15.50 13.06 9.30 8.71 6.59 3.81 </line>
<line>LEU CA 11.13 14.14 13.09 10.21 6.47 5.42 3.82 </line>
<line>GLN CA 12.22 14.63 13.55 10.02 6.97 3.83 </line>
<line>ALA CA 9.15 11.05 9.93 6.26 3.82 </line>
<line>PHE CA 6.23 8.20 6.74 3.81 </line>
<line>THR CA 5.47 5.50 3.84 </line>
<line>PRO CA 5.53 3.82 </line>
<line>VAL CA 3.83 </line>
<line>THR CA </line>
</distance-map>
<n14>
<line>VAL CA 221</line>
<line>ASN CA 235</line>
<line>LEU CA 242</line>
<line>GLN CA 147</line>
<line>ALA CA 169</line>
<line>PHE CA 211</line>
<line>THR CA 168</line>
<line>PRO CA 160</line>
<line>VAL CA 188</line>
<line>THR CA 269</line>
</n14>
</entryChain>
<entryChain>
<pdbID>2QU0</pdbID>
<pdbChain>C</pdbChain>
<entryIDChain>2QU0C</entryIDChain>
<sequence>CHLPNDFTPAV</sequence>
<secondary-structure> HHHH HHH</secondary-structure>
<atom-coordinate>
<line>ATOM 3021 CA CYS C 111 21.688 15.237 31.240 1.00 37.84 C </line>
<line>ATOM 3027 CA HIS C 112 20.541 11.934 29.809 1.00 38.35 C </line>
<line>ATOM 3037 CA LEU C 113 17.773 13.217 27.562 1.00 37.34 C </line>
<line>ATOM 3045 CA PRO C 114 19.091 16.483 26.086 1.00 37.98 C </line>
<line>ATOM 3052 CA ASN C 115 16.893 15.767 23.041 1.00 40.25 C </line>
<line>ATOM 3060 CA ASP C 116 13.711 15.178 24.982 1.00 37.75 C </line>
<line>ATOM 3068 CA PHE C 117 14.090 17.805 27.744 1.00 34.22 C </line>
<line>ATOM 3079 CA THR C 118 12.317 20.586 25.846 1.00 30.70 C </line>
<line>ATOM 3086 CA PRO C 119 11.435 23.758 27.776 1.00 29.48 C </line>
<line>ATOM 3093 CA ALA C 120 7.829 22.585 27.630 1.00 29.70 C </line>
<line>ATOM 3098 CA VAL C 121 8.696 19.251 29.158 1.00 28.41 C </line>
</atom-coordinate>
<distance-map>
<line> VAL ALA PRO THR PHE ASP ASN PRO LEU HIS CYS </line>
<line> CA CA CA CA CA CA CA CA CA CA CA </line>
<line>CYS CA 13.76 16.10 13.77 12.06 8.75 10.14 9.51 5.90 5.74 3.78 </line>
<line>HIS CA 13.94 16.73 15.06 12.58 8.96 8.97 8.59 6.05 3.79 </line>
<line>LEU CA 11.02 13.66 12.30 9.33 5.89 5.20 5.26 3.82 </line>
<line>PRO CA 11.19 12.90 10.70 7.92 5.43 5.65 3.82 </line>
<line>ASN CA 10.80 12.24 10.77 7.21 5.84 3.77 </line>
<line>ASP CA 7.69 9.82 9.31 5.65 3.83 </line>
<line>PHE CA 5.76 7.88 6.52 3.81 </line>
<line>THR CA 5.09 5.23 3.82 </line>
<line>PRO CA 5.45 3.79 </line>
<line>ALA CA 3.77 </line>
<line>VAL CA </line>
</distance-map>
<n14>
<line>CYS CA 245</line>
<line>HIS CA 243</line>
<line>LEU CA 250</line>
<line>PRO CA 184</line>
<line>ASN CA 163</line>
<line>ASP CA 225</line>
<line>PHE CA 263</line>
<line>THR CA 201</line>
<line>PRO CA 184</line>
<line>ALA CA 208</line>
<line>VAL CA 292</line>
</n14>
</entryChain>
<parallel>
<x>8.781000137329102</x>
<y>10.562000274658203</y>
<z>-9.675999641418457</z>
</parallel>
<rotation>
<x>0.5230000019073486</x>
<y>-0.781000018119812</y>
<z>-0.34299999475479126</z>
<x>-0.2370000034570694</x>
<y>-0.5189999938011169</y>
<z>0.8209999799728394</z>
<x>-0.8190000057220459</x>
<y>-0.3479999899864197</y>
<z>-0.4560000002384186</z>
</rotation>
<rmsd>1.4320809841156006</rmsd>
<dmax>3.1181159019470215</dmax>
</indel>
<indel>
<confEVID></confEVID>
<index>1</index>
<entryChain>
<pdbID>2QU0</pdbID>
<pdbChain>C</pdbChain>
<entryIDChain>2QU0C</entryIDChain>
<sequence>YFPHF-DLSHG</sequence>
<secondary-structure>G - </secondary-structure>
<atom-coordinate>
<line>ATOM 2497 CA TYR C 42 19.407 12.482 57.026 1.00 38.90 C </line>
<line>ATOM 2509 CA PHE C 43 21.468 9.397 56.104 1.00 37.38 C </line>
<line>ATOM 2520 CA PRO C 44 24.018 9.018 58.911 1.00 38.40 C </line>
<line>ATOM 2527 CA HIS C 45 23.629 5.251 58.401 1.00 41.02 C </line>
<line>ATOM 2537 CA PHE C 46 24.644 5.329 54.695 1.00 42.58 C </line>
<line>ATOM 2548 CA ASP C 47 27.916 5.115 52.835 1.00 45.20 C </line>
<line>ATOM 2556 CA LEU C 48 27.697 8.180 50.624 1.00 47.74 C </line>
<line>ATOM 2564 CA SER C 49 30.465 7.542 48.087 1.00 50.48 C </line>
<line>ATOM 2570 CA HIS C 50 30.038 6.631 44.442 1.00 52.17 C </line>
<line>ATOM 2580 CA GLY C 51 28.317 3.400 43.482 1.00 52.11 C </line>
</atom-coordinate>
<distance-map>
<line> GLY HIS SER LEU ASP PHE HIS PRO PHE TYR </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>TYR CA 18.58 17.48 15.05 11.32 12.01 9.17 8.49 6.07 3.82 </line>
<line>PHE CA 15.56 14.73 12.19 8.39 8.40 5.35 5.21 3.81 </line>
<line>PRO CA 16.97 15.85 12.68 9.11 8.21 5.64 3.82 </line>
<line>HIS CA 15.75 15.42 12.58 9.25 7.03 3.84 </line>
<line>PHE CA 11.96 11.66 9.08 5.83 3.77 </line>
<line>ASP CA 9.52 8.79 5.91 3.79 </line>
<line>LEU CA 8.62 6.79 3.81 </line>
<line>SER CA 6.56 3.78 </line>
<line>HIS CA 3.78 </line>
<line>GLY CA </line>
</distance-map>
<n14>
<line>TYR CA 288</line>
<line>PHE CA 272</line>
<line>PRO CA 172</line>
<line>HIS CA 156</line>
<line>PHE CA 206</line>
<line>ASP CA 195</line>
<line>LEU CA 250</line>
<line>SER CA 208</line>
<line>HIS CA 199</line>
<line>GLY CA 194</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1CG5</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1CG5A</entryIDChain>
<sequence>YFSKFSGFEAC</sequence>
<secondary-structure>G </secondary-structure>
<atom-coordinate>
<line>ATOM 317 CA TYR A 42 3.923 22.670 -2.861 1.00 11.44 C </line>
<line>ATOM 329 CA PHE A 43 7.000 22.144 -5.058 1.00 11.24 C </line>
<line>ATOM 340 CA SER A 44 5.722 19.734 -7.713 1.00 18.62 C </line>
<line>ATOM 346 CA LYS A 45 7.980 21.337 -10.351 1.00 19.64 C </line>
<line>ATOM 355 CA PHE A 46 11.119 20.162 -8.524 1.00 14.48 C </line>
<line>ATOM 366 CA SER A 47 13.325 17.413 -9.965 1.00 15.93 C </line>
<line>ATOM 372 CA GLY A 48 14.682 16.585 -6.507 1.00 13.25 C </line>
<line>ATOM 376 CA PHE A 49 14.446 17.499 -2.832 1.00 14.96 C </line>
<line>ATOM 387 CA GLU A 50 18.019 17.204 -1.547 1.00 13.80 C </line>
<line>ATOM 396 CA ALA A 51 20.051 20.177 -0.357 1.00 12.65 C </line>
<line>ATOM 401 CA CYS A 52 22.345 19.350 -3.338 1.00 19.12 C </line>
</atom-coordinate>
<distance-map>
<line> CYS ALA GLU PHE GLY SER PHE LYS SER PHE TYR </line>
<line> CA CA CA CA CA CA CA CA CA CA CA </line>
<line>TYR CA 18.72 16.51 15.18 11.72 12.89 12.90 9.49 8.62 5.95 3.82 </line>
<line>PHE CA 15.69 14.01 12.58 9.05 9.59 9.30 5.74 5.44 3.81 </line>
<line>SER CA 17.19 16.11 13.99 10.24 9.57 8.26 5.47 3.82 </line>
<line>LYS CA 16.11 15.71 13.98 10.63 9.07 6.64 3.82 </line>
<line>PHE CA 12.39 12.10 10.25 7.11 5.44 3.81 </line>
<line>SER CA 11.36 12.05 9.64 7.22 3.81 </line>
<line>GLY CA 8.74 8.92 6.01 3.79 </line>
<line>PHE CA 8.13 6.69 3.81 </line>
<line>GLU CA 5.15 3.79 </line>
<line>ALA CA 3.85 </line>
<line>CYS CA </line>
</distance-map>
<n14>
<line>TYR CA 284</line>
<line>PHE CA 281</line>
<line>SER CA 181</line>
<line>LYS CA 168</line>
<line>PHE CA 212</line>
<line>SER CA 175</line>
<line>GLY CA 226</line>
<line>PHE CA 292</line>
<line>GLU CA 268</line>
<line>ALA CA 299</line>
<line>CYS CA 211</line>
</n14>
</entryChain>
<parallel>
<x>14.543999671936035</x>
<y>-11.878000259399414</y>
<z>60.2599983215332</z>
</parallel>
<rotation>
<x>0.3580000102519989</x>
<y>-0.5490000247955322</y>
<z>-0.7549999952316284</z>
<x>-0.9330000281333923</x>
<y>-0.23199999332427979</y>
<z>-0.27399998903274536</z>
<x>-0.02500000037252903</x>
<y>0.8029999732971191</y>
<z>-0.5950000286102295</z>
</rotation>
<rmsd>0.9695829749107361</rmsd>
<dmax>1.4874080419540405</dmax>
</indel>