NBDC - アーカイブトップ - ヘルプ
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タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
1CG8A-2QU0A
confEVID 1CG8A-2QU0A
pdbIDA 1CG8
pdbIDB 2QU0
pdbChainA A
pdbChainB A
identity 0.436599999666214
indelSize 2
alignment <alignment>
<seq1>VLSSQNKKAIEELGNLIKANAEAWGADALARLFELHPQTKTYFSKFSGFEACNEQVKKHGKRVMNALADATHHLDNLHLHLEDLARKHGENLLVDPHNFHLFADCIVVTLAVNLQA-FTPVTHCAVDKFLELVAYELSSCYR</seq1>
<seq2>VLSAADKSNVKAAWGKVGGNAGAYGAEALERMFLSFPTTKTYFPHF-DLSHGSAQVKGHGEKVAAALTKAVGHLDDLPGTLSDLSDLHAHKLRVDPVNFKLLSHSLLVTLACHLPNDFTPAVHASLDKFLANVSTVLTSKYR</seq2>
<ss_1> HHHHHHHHHHHHHHHH HHHHHHHHHHHHHHH GGGG HHHHHHHHHHHHHHHHGGG HHHHHHHHHHIIIII HHHHHHHHHHHHHHHHHH - HHHHHHHHHHHHHHHHHH </ss_1>
<ss_2> HHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHH GGGG - HHHHHHHHHHHHHHHHHHH GGG HHHHHIIIII HHHHHHHHHHHHHHHH HHHH HHHHHHHHHHHHHHHHHH </ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>1CG8</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1CG8A</entryIDChain>
<sequence>VNLQA-FTPVT</sequence>
<secondary-structure>HH - HHH</secondary-structure>
<atom-coordinate>
<line>ATOM 879 CA VAL A 112 -8.054 35.963 3.011 1.00 25.97 C </line>
<line>ATOM 886 CA ASN A 113 -9.619 39.173 1.697 1.00 26.03 C </line>
<line>ATOM 894 CA LEU A 114 -6.786 41.586 0.910 1.00 32.55 C </line>
<line>ATOM 902 CA GLN A 115 -5.140 41.605 -2.525 1.00 30.61 C </line>
<line>ATOM 911 CA ALA A 116 -1.770 41.378 -0.775 1.00 29.83 C </line>
<line>ATOM 916 CA PHE A 117 -0.679 40.831 2.845 1.00 23.89 C </line>
<line>ATOM 927 CA THR A 118 3.117 41.051 3.163 1.00 21.42 C </line>
<line>ATOM 934 CA PRO A 119 5.000 40.423 6.446 1.00 22.91 C </line>
<line>ATOM 941 CA VAL A 120 5.477 44.204 6.800 1.00 23.89 C </line>
<line>ATOM 948 CA THR A 121 1.744 44.956 6.499 1.00 23.03 C </line>
</atom-coordinate>
<distance-map>
<line> THR VAL PRO THR PHE ALA GLN LEU ASN VAL </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>VAL CA 13.75 16.29 14.22 12.28 8.84 9.12 8.42 6.14 3.81 </line>
<line>ASN CA 13.62 16.71 15.42 12.96 9.16 8.52 6.62 3.80 </line>
<line>LEU CA 10.74 13.85 13.07 10.17 6.45 5.30 3.81 </line>
<line>GLN CA 11.83 14.37 13.59 10.04 7.02 3.80 </line>
<line>ALA CA 8.84 10.86 9.94 6.28 3.82 </line>
<line>PHE CA 6.02 8.06 6.74 3.82 </line>
<line>THR CA 5.32 5.36 3.84 </line>
<line>PRO CA 5.58 3.83 </line>
<line>VAL CA 3.82 </line>
<line>THR CA </line>
</distance-map>
<n14>
<line>VAL CA 224</line>
<line>ASN CA 236</line>
<line>LEU CA 246</line>
<line>GLN CA 155</line>
<line>ALA CA 177</line>
<line>PHE CA 216</line>
<line>THR CA 177</line>
<line>PRO CA 167</line>
<line>VAL CA 199</line>
<line>THR CA 278</line>
</n14>
</entryChain>
<entryChain>
<pdbID>2QU0</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>2QU0A</entryIDChain>
<sequence>CHLPNDFTPAV</sequence>
<secondary-structure>HH HHHH HHH</secondary-structure>
<atom-coordinate>
<line>ATOM 822 CA CYS A 111 0.010 43.050 68.078 1.00 35.54 C </line>
<line>ATOM 828 CA HIS A 112 -3.677 43.594 68.568 1.00 36.17 C </line>
<line>ATOM 838 CA LEU A 113 -4.634 40.267 70.180 1.00 35.76 C </line>
<line>ATOM 846 CA PRO A 114 -1.803 39.313 72.602 1.00 35.29 C </line>
<line>ATOM 853 CA ASN A 115 -3.981 37.285 74.939 1.00 35.30 C </line>
<line>ATOM 861 CA ASP A 116 -5.535 35.265 72.098 1.00 33.91 C </line>
<line>ATOM 869 CA PHE A 117 -2.377 34.768 69.991 1.00 31.13 C </line>
<line>ATOM 880 CA THR A 118 -1.129 31.547 71.527 1.00 29.25 C </line>
<line>ATOM 887 CA PRO A 119 1.442 29.208 70.053 1.00 28.45 C </line>
<line>ATOM 894 CA ALA A 120 -1.350 26.842 68.940 1.00 27.22 C </line>
<line>ATOM 899 CA VAL A 121 -3.377 29.697 67.316 1.00 25.75 C </line>
</atom-coordinate>
<distance-map>
<line> VAL ALA PRO THR PHE ASP ASN PRO LEU HIS CYS </line>
<line> CA CA CA CA CA CA CA CA CA CA CA </line>
<line>CYS CA 13.80 16.29 14.06 12.06 8.83 10.37 9.81 6.14 5.81 3.76 </line>
<line>HIS CA 13.96 16.92 15.34 12.66 9.03 9.24 8.97 6.17 3.82 </line>
<line>LEU CA 11.02 13.88 12.62 9.49 5.95 5.43 5.65 3.85 </line>
<line>PRO CA 11.09 13.01 10.92 7.87 5.27 5.53 3.78 </line>
<line>ASN CA 10.77 12.33 10.89 7.26 5.78 3.82 </line>
<line>ASP CA 7.65 9.92 9.46 5.79 3.83 </line>
<line>PHE CA 5.82 8.06 6.75 3.78 </line>
<line>THR CA 5.12 5.37 3.78 </line>
<line>PRO CA 5.56 3.83 </line>
<line>ALA CA 3.86 </line>
<line>VAL CA </line>
</distance-map>
<n14>
<line>CYS CA 243</line>
<line>HIS CA 250</line>
<line>LEU CA 256</line>
<line>PRO CA 184</line>
<line>ASN CA 159</line>
<line>ASP CA 222</line>
<line>PHE CA 257</line>
<line>THR CA 204</line>
<line>PRO CA 174</line>
<line>ALA CA 208</line>
<line>VAL CA 291</line>
</n14>
</entryChain>
<parallel>
<x>-0.9729999899864197</x>
<y>2.871999979019165</y>
<z>-68.89600372314453</z>
</parallel>
<rotation>
<x>0.3499999940395355</x>
<y>-0.9350000023841858</y>
<z>0.05999999865889549</z>
<x>-0.8640000224113464</x>
<y>-0.34599998593330383</y>
<z>-0.3659999966621399</z>
<x>0.3630000054836273</x>
<y>0.07599999755620956</y>
<z>-0.9290000200271606</z>
</rotation>
<rmsd>1.4067569971084595</rmsd>
<dmax>3.1069560050964355</dmax>
</indel>
<indel>
<confEVID></confEVID>
<index>1</index>
<entryChain>
<pdbID>2QU0</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>2QU0A</entryIDChain>
<sequence>YFPHF-DLSHG</sequence>
<secondary-structure>G - </secondary-structure>
<atom-coordinate>
<line>ATOM 298 CA TYR A 42 2.907 46.598 42.438 1.00 32.88 C </line>
<line>ATOM 310 CA PHE A 43 1.096 49.759 43.570 1.00 33.90 C </line>
<line>ATOM 321 CA PRO A 44 2.685 52.703 41.696 1.00 34.52 C </line>
<line>ATOM 328 CA HIS A 45 -0.863 54.031 41.338 1.00 35.24 C </line>
<line>ATOM 338 CA PHE A 46 -1.417 54.281 45.100 1.00 36.19 C </line>
<line>ATOM 349 CA ASP A 47 -0.627 57.029 47.549 1.00 38.47 C </line>
<line>ATOM 357 CA LEU A 48 1.526 54.925 49.927 1.00 40.14 C </line>
<line>ATOM 365 CA SER A 49 1.989 57.618 52.547 1.00 41.87 C </line>
<line>ATOM 371 CA HIS A 50 1.106 56.646 56.099 1.00 43.12 C </line>
<line>ATOM 381 CA GLY A 51 -2.641 56.763 56.509 1.00 41.13 C </line>
</atom-coordinate>
<distance-map>
<line> GLY HIS SER LEU ASP PHE HIS PRO PHE TYR </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>TYR CA 18.22 17.05 14.98 11.28 12.14 9.21 8.41 6.15 3.81 </line>
<line>PHE CA 15.18 14.30 11.96 8.20 8.46 5.39 5.20 3.83 </line>
<line>PRO CA 16.26 15.02 11.93 8.60 8.00 5.56 3.81 </line>
<line>HIS CA 15.52 15.12 12.11 8.96 6.90 3.81 </line>
<line>PHE CA 11.74 11.53 8.84 5.69 3.76 </line>
<line>ASP CA 9.19 8.73 5.67 3.84 </line>
<line>LEU CA 8.00 6.42 3.79 </line>
<line>SER CA 6.15 3.79 </line>
<line>HIS CA 3.77 </line>
<line>GLY CA </line>
</distance-map>
<n14>
<line>TYR CA 281</line>
<line>PHE CA 269</line>
<line>PRO CA 173</line>
<line>HIS CA 159</line>
<line>PHE CA 206</line>
<line>ASP CA 191</line>
<line>LEU CA 246</line>
<line>SER CA 201</line>
<line>HIS CA 197</line>
<line>GLY CA 197</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1CG8</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1CG8A</entryIDChain>
<sequence>YFSKFSGFEAC</sequence>
<secondary-structure>G </secondary-structure>
<atom-coordinate>
<line>ATOM 317 CA TYR A 42 -20.476 36.320 26.053 1.00 23.95 C </line>
<line>ATOM 329 CA PHE A 43 -23.163 36.445 23.381 1.00 34.61 C </line>
<line>ATOM 340 CA SER A 44 -26.158 35.103 25.308 1.00 49.35 C </line>
<line>ATOM 346 CA LYS A 45 -28.593 36.902 22.991 1.00 48.10 C </line>
<line>ATOM 355 CA PHE A 46 -27.284 35.396 19.710 1.00 42.88 C </line>
<line>ATOM 366 CA SER A 47 -29.269 32.564 18.118 1.00 47.58 C </line>
<line>ATOM 372 CA GLY A 48 -26.542 31.383 15.762 1.00 41.25 C </line>
<line>ATOM 376 CA PHE A 49 -22.794 31.852 15.311 1.00 36.25 C </line>
<line>ATOM 387 CA GLU A 50 -22.258 31.320 11.566 1.00 36.49 C </line>
<line>ATOM 396 CA ALA A 51 -21.039 34.248 9.422 1.00 36.72 C </line>
<line>ATOM 401 CA CYS A 52 -24.443 34.247 7.685 1.00 45.39 C </line>
</atom-coordinate>
<distance-map>
<line> CYS ALA GLU PHE GLY SER PHE LYS SER PHE TYR </line>
<line> CA CA CA CA CA CA CA CA CA CA CA </line>
<line>TYR CA 18.91 16.77 15.43 11.86 12.93 12.43 9.35 8.69 5.86 3.79 </line>
<line>PHE CA 15.90 14.29 12.91 9.29 9.75 8.95 5.62 5.46 3.81 </line>
<line>SER CA 17.73 16.71 14.78 11.04 10.25 8.24 5.72 3.81 </line>
<line>LYS CA 16.08 15.76 14.21 10.87 9.32 6.56 3.84 </line>
<line>PHE CA 12.41 12.09 10.40 7.22 5.68 3.81 </line>
<line>SER CA 11.62 12.09 9.68 7.09 3.79 </line>
<line>GLY CA 8.82 8.87 6.00 3.80 </line>
<line>PHE CA 8.16 6.60 3.82 </line>
<line>GLU CA 5.33 3.83 </line>
<line>ALA CA 3.82 </line>
<line>CYS CA </line>
</distance-map>
<n14>
<line>TYR CA 290</line>
<line>PHE CA 292</line>
<line>SER CA 181</line>
<line>LYS CA 173</line>
<line>PHE CA 229</line>
<line>SER CA 184</line>
<line>GLY CA 234</line>
<line>PHE CA 289</line>
<line>GLU CA 259</line>
<line>ALA CA 293</line>
<line>CYS CA 210</line>
</n14>
</entryChain>
<parallel>
<x>25.570999145507812</x>
<y>19.027999877929688</y>
<z>25.510000228881836</z>
</parallel>
<rotation>
<x>0.44600000977516174</x>
<y>-0.6890000104904175</y>
<z>0.5709999799728394</z>
<x>-0.8019999861717224</x>
<y>-0.5910000205039978</y>
<z>-0.08500000089406967</z>
<x>0.3959999978542328</x>
<y>-0.42100000381469727</y>
<z>-0.8159999847412109</z>
</rotation>
<rmsd>1.389991044998169</rmsd>
<dmax>1.974863052368164</dmax>
</indel>