NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | 利用許諾 | ヘルプ
タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
1CSKB-2ROTA
confEVID 1CSKB-2ROTA
pdbIDA 1CSK
pdbIDB 2ROT
pdbChainA B
pdbChainB A
identity 0.261500000953674
indelSize 1
alignment <alignment>
<seq1>-----GTECIAKYNFHGTAEQDLPFCKGDVLTIVAVTKDPNWYKAKNKV-------GREGIIPANYVQKR-</seq1>
<seq2>MDETGKELVLALYDYQEKSPREVTMKKGDILTLLNS-TNKDWWKVEVKITVNGKTYERQGFVPAAYVKKLD</seq2>
<ss_1>----- EEEEE EEEEEEE EEEEEEE ------- EEEEEEE -</ss_1>
<ss_2> EEEEE EEEE - EEEEEEEEEEE EEEEEEEEEEEEEEE </ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>2ROT</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>2ROTA</entryIDChain>
<sequence>TLLNS-TNKDW</sequence>
<secondary-structure>E - EE</secondary-structure>
<atom-coordinate>
<line>ATOM 507 CA THR A 32 -3.299 4.610 -4.066 1.00 0.00 C </line>
<line>ATOM 521 CA LEU A 33 -6.438 5.973 -5.726 1.00 0.00 C </line>
<line>ATOM 540 CA LEU A 34 -9.104 3.462 -4.694 1.00 0.00 C </line>
<line>ATOM 559 CA ASN A 35 -12.202 5.466 -5.621 1.00 0.00 C </line>
<line>ATOM 573 CA SER A 36 -12.341 8.669 -7.668 1.00 0.00 C </line>
<line>ATOM 584 CA THR A 37 -16.096 8.687 -8.270 1.00 0.00 C </line>
<line>ATOM 598 CA ASN A 38 -16.155 12.140 -6.676 1.00 0.00 C </line>
<line>ATOM 612 CA LYS A 39 -14.332 15.307 -7.732 1.00 0.00 C </line>
<line>ATOM 634 CA ASP A 40 -13.888 16.961 -4.336 1.00 0.00 C </line>
<line>ATOM 646 CA TRP A 41 -13.392 13.994 -2.008 1.00 0.00 C </line>
</atom-coordinate>
<distance-map>
<line> TRP ASP LYS ASN THR SER ASN LEU LEU THR </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>THR CA 13.93 16.27 15.80 15.13 14.07 10.55 9.08 5.95 3.80 </line>
<line>LEU CA 11.25 13.35 12.39 11.55 10.35 6.77 5.79 3.80 </line>
<line>LEU CA 11.68 14.33 13.30 11.36 9.43 6.81 3.80 </line>
<line>ASN CA 9.34 11.69 10.29 7.83 5.71 3.80 </line>
<line>SER CA 7.84 9.07 6.93 5.25 3.80 </line>
<line>THR CA 8.64 9.42 6.87 3.80 </line>
<line>ASN CA 5.73 5.82 3.80 </line>
<line>LYS CA 5.95 3.80 </line>
<line>ASP CA 3.80 </line>
<line>TRP CA </line>
</distance-map>
<n14>
<line>THR CA 692</line>
<line>LEU CA 711</line>
<line>LEU CA 603</line>
<line>ASN CA 517</line>
<line>SER CA 506</line>
<line>THR CA 334</line>
<line>ASN CA 372</line>
<line>LYS CA 376</line>
<line>ASP CA 424</line>
<line>TRP CA 566</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1CSK</pdbID>
<pdbChain>B</pdbChain>
<entryIDChain>1CSKB</entryIDChain>
<sequence>TIVAVTKDPNW</sequence>
<secondary-structure>EEEE EE</secondary-structure>
<atom-coordinate>
<line>ATOM 658 CA THR B 37 26.647 62.795 -1.941 1.00 13.82 C </line>
<line>ATOM 665 CA ILE B 38 28.635 63.889 1.112 1.00 16.01 C </line>
<line>ATOM 673 CA VAL B 39 30.484 67.051 0.169 1.00 18.70 C </line>
<line>ATOM 680 CA ALA B 40 32.022 67.938 3.513 1.00 22.43 C </line>
<line>ATOM 685 CA VAL B 41 32.480 67.175 7.146 1.00 20.73 C </line>
<line>ATOM 692 CA THR B 42 31.094 69.721 9.620 1.00 18.96 C </line>
<line>ATOM 699 CA LYS B 43 32.141 70.843 13.113 1.00 24.83 C </line>
<line>ATOM 708 CA ASP B 44 29.746 68.331 14.689 1.00 19.73 C </line>
<line>ATOM 716 CA PRO B 45 30.511 64.675 13.771 1.00 16.04 C </line>
<line>ATOM 723 CA ASN B 46 26.799 63.982 13.636 1.00 13.89 C </line>
<line>ATOM 731 CA TRP B 47 26.074 66.226 10.695 1.00 11.74 C </line>
</atom-coordinate>
<distance-map>
<line> TRP ASN PRO ASP LYS THR VAL ALA VAL ILE THR </line>
<line> CA CA CA CA CA CA CA CA CA CA CA </line>
<line>THR CA 13.11 15.62 16.29 17.80 17.93 14.19 11.65 9.22 6.11 3.80 </line>
<line>ILE CA 10.19 12.66 12.82 14.33 14.31 10.60 7.87 5.80 3.78 </line>
<line>VAL CA 11.44 14.30 13.81 14.59 13.59 9.84 7.26 3.79 </line>
<line>ALA CA 9.48 12.06 10.87 11.41 10.03 6.43 3.74 </line>
<line>VAL CA 7.38 9.20 7.35 8.11 7.01 3.81 </line>
<line>THR CA 6.21 8.22 6.56 5.43 3.82 </line>
<line>LYS CA 8.00 8.71 6.41 3.81 </line>
<line>ASP CA 5.82 5.36 3.85 </line>
<line>PRO CA 5.62 3.78 </line>
<line>ASN CA 3.77 </line>
<line>TRP CA </line>
</distance-map>
<n14>
<line>THR CA 292</line>
<line>ILE CA 308</line>
<line>VAL CA 242</line>
<line>ALA CA 222</line>
<line>VAL CA 210</line>
<line>THR CA 183</line>
<line>LYS CA 131</line>
<line>ASP CA 149</line>
<line>PRO CA 156</line>
<line>ASN CA 201</line>
<line>TRP CA 284</line>
</n14>
</entryChain>
<parallel>
<x>-41.57899856567383</x>
<y>-58.54800033569336</y>
<z>-12.753000259399414</z>
</parallel>
<rotation>
<x>-0.21899999678134918</x>
<y>-0.35499998927116394</y>
<z>-0.9089999794960022</z>
<x>-0.7820000052452087</x>
<y>-0.49399998784065247</y>
<z>0.38100001215934753</z>
<x>-0.5839999914169312</x>
<y>0.7940000295639038</y>
<z>-0.16899999976158142</z>
</rotation>
<rmsd>1.8727550506591797</rmsd>
<dmax>3.4557619094848633</dmax>
</indel>