NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | 利用許諾 | ヘルプ
タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
1A3FB-2NOTA
confEVID 1A3FB-2NOTA
pdbIDA 1A3F
pdbIDB 2NOT
pdbChainA B
pdbChainB A
identity 0.53329998254776
indelSize 1
alignment <alignment>
<seq1>NLYQFKNMIKCTV-PSRSWWDFADYGCYCGRGGSGTPVDDLDRCCQVHDNCYNEAEKISGCWPYFKTYSYECSQGTLTCKGDNNACAASVCDCDRLAAICFAGAPYNDNNYNIDLKARCQ</seq1>
<seq2>NLVQFSYLIQCANHGRRPTRHYMDYGCYCGWGGSGTPVDELDRCCKIHDDCYSDAEKK-GCSPKMSAYDYYCGENGPYCRNIKKKCLRFVCDCDVEAAFCFAKAPYNNANWNIDTKKRCQ</seq2>
<ss_1> HHHHHHHHHH - GGGG HHHHHHHHHHHHHHHGGG EEE EEE HHHHHHHHHHHHHHHHHH GGG HHHH </ss_1>
<ss_2> HHHHHHHHHH HHHH HHHHHHHHHHHHHHHHH - HHHH EEE EEE HHHHHHHHHHHHHHHHHHH GGG HHHH </ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>2NOT</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>2NOTA</entryIDChain>
<sequence>DAEKK-GCSPK</sequence>
<secondary-structure>HHH - HH</secondary-structure>
<atom-coordinate>
<line>ATOM 426 CA ASP A 54 2.288 18.071 42.980 1.00 6.55 C </line>
<line>ATOM 434 CA ALA A 55 0.720 17.168 39.669 1.00 2.00 C </line>
<line>ATOM 439 CA GLU A 56 -2.454 15.959 41.385 1.00 3.02 C </line>
<line>ATOM 448 CA LYS A 57 -2.556 19.164 43.522 1.00 2.33 C </line>
<line>ATOM 457 CA LYS A 59 -2.467 21.275 40.298 1.00 2.00 C </line>
<line>ATOM 466 CA GLY A 60 -5.399 19.295 38.860 1.00 2.00 C </line>
<line>ATOM 470 CA CYS A 61 -3.214 17.052 36.722 1.00 2.00 C </line>
<line>ATOM 476 CA SER A 67 -4.165 13.354 36.918 1.00 5.61 C </line>
<line>ATOM 482 CA PRO A 68 -0.869 11.496 36.172 1.00 4.23 C </line>
<line>ATOM 489 CA LYS A 69 -2.915 8.416 35.297 1.00 11.82 C </line>
</atom-coordinate>
<distance-map>
<line> LYS PRO SER CYS GLY LYS LYS GLU ALA ASP </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>ASP CA 13.39 9.98 10.03 8.39 8.81 6.33 5.00 5.43 3.77 </line>
<line>ALA CA 10.44 6.85 6.78 4.92 6.53 5.24 5.44 3.81 </line>
<line>GLU CA 9.70 7.04 5.45 4.85 5.12 5.43 3.85 </line>
<line>LYS CA 13.54 10.75 8.94 7.15 5.46 3.85 </line>
<line>LYS CA 13.80 10.73 8.78 5.58 3.82 </line>
<line>GLY CA 11.71 9.41 6.37 3.79 </line>
<line>CYS CA 8.76 6.06 3.82 </line>
<line>SER CA 5.35 3.86 </line>
<line>PRO CA 3.80 </line>
<line>LYS CA </line>
</distance-map>
<n14>
<line>ASP CA 212</line>
<line>ALA CA 265</line>
<line>GLU CA 213</line>
<line>LYS CA 147</line>
<line>LYS CA 167</line>
<line>GLY CA 168</line>
<line>CYS CA 246</line>
<line>SER CA 258</line>
<line>PRO CA 321</line>
<line>LYS CA 267</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1A3F</pdbID>
<pdbChain>B</pdbChain>
<entryIDChain>1A3FB</entryIDChain>
<sequence>EAEKISGCWPY</sequence>
<secondary-structure>HGGG </secondary-structure>
<atom-coordinate>
<line>ATOM 1348 CA GLU B 53 56.440 19.580 -3.920 1.00 10.33 C </line>
<line>ATOM 1357 CA ALA B 54 59.072 21.183 -1.705 1.00 7.80 C </line>
<line>ATOM 1362 CA GLU B 55 59.182 18.013 0.387 1.00 7.29 C </line>
<line>ATOM 1371 CA LYS B 56 60.288 16.055 -2.663 1.00 13.35 C </line>
<line>ATOM 1380 CA ILE B 57 63.718 17.598 -2.044 1.00 5.13 C </line>
<line>ATOM 1388 CA SER B 58 65.704 15.398 0.349 1.00 5.53 C </line>
<line>ATOM 1394 CA GLY B 59 65.819 16.809 3.855 1.00 10.00 C </line>
<line>ATOM 1398 CA CYS B 60 63.283 19.536 3.115 1.00 3.00 C </line>
<line>ATOM 1404 CA TRP B 61 60.843 20.067 5.974 1.00 8.87 C </line>
<line>ATOM 1418 CA PRO B 62 58.894 23.223 5.103 1.00 13.82 C </line>
<line>ATOM 1425 CA TYR B 63 57.840 24.393 8.557 1.00 14.86 C </line>
</atom-coordinate>
<distance-map>
<line> TYR PRO TRP CYS GLY SER ILE LYS GLU ALA GLU </line>
<line> CA CA CA CA CA CA CA CA CA CA CA </line>
<line>GLU CA 13.45 10.04 10.84 9.81 12.49 11.02 7.77 5.37 5.34 3.80 </line>
<line>ALA CA 10.82 7.11 7.96 6.61 9.78 9.04 5.88 5.36 3.80 </line>
<line>GLU CA 10.45 7.03 6.18 5.16 7.58 7.03 5.16 3.79 </line>
<line>LYS CA 14.19 10.66 9.54 7.38 8.58 6.23 3.81 </line>
<line>ILE CA 13.90 10.30 8.87 5.53 6.31 3.81 </line>
<line>SER CA 14.50 11.41 8.78 5.53 3.78 </line>
<line>GLY CA 11.97 9.52 6.31 3.80 </line>
<line>CYS CA 9.10 6.07 3.80 </line>
<line>TRP CA 5.87 3.81 </line>
<line>PRO CA 3.80 </line>
<line>TYR CA </line>
</distance-map>
<n14>
<line>GLU CA 217</line>
<line>ALA CA 284</line>
<line>GLU CA 233</line>
<line>LYS CA 169</line>
<line>ILE CA 174</line>
<line>SER CA 143</line>
<line>GLY CA 163</line>
<line>CYS CA 243</line>
<line>TRP CA 265</line>
<line>PRO CA 335</line>
<line>TYR CA 328</line>
</n14>
</entryChain>
<parallel>
<x>-63.236000061035156</x>
<y>-0.9380000233650208</y>
<z>39.66899871826172</z>
</parallel>
<rotation>
<x>-0.4309999942779541</x>
<y>0.7160000205039978</y>
<z>-0.5490000247955322</z>
<x>0.6919999718666077</x>
<y>-0.12800000607967377</y>
<z>-0.7099999785423279</z>
<x>-0.5789999961853027</x>
<y>-0.6859999895095825</y>
<z>-0.4410000145435333</z>
</rotation>
<rmsd>1.2616660594940186</rmsd>
<dmax>2.680095911026001</dmax>
</indel>