NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | 利用許諾 | ヘルプ
タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
1CSKC-2ROTA
confEVID 1CSKC-2ROTA
pdbIDA 1CSK
pdbIDB 2ROT
pdbChainA C
pdbChainB A
identity 0.261500000953674
indelSize 1
alignment <alignment>
<seq1>-----GTECIAKYNFHGTAEQDLPFCKGDVLTIVAVTKDPNWYKAKNKVG-------REGIIPANYVQKR-</seq1>
<seq2>MDETGKELVLALYDYQEKSPREVTMKKGDILTLLNS-TNKDWWKVEVKITVNGKTYERQGFVPAAYVKKLD</seq2>
<ss_1>----- EEEEE EEEEEEE EEEEEE -------EEEEE -</ss_1>
<ss_2> EEEEE EEEE - EEEEEEEEEEE EEEEEEEEEEEEEEE </ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>2ROT</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>2ROTA</entryIDChain>
<sequence>TLLNS-TNKDW</sequence>
<secondary-structure>E - EE</secondary-structure>
<atom-coordinate>
<line>ATOM 507 CA THR A 32 -3.299 4.610 -4.066 1.00 0.00 C </line>
<line>ATOM 521 CA LEU A 33 -6.438 5.973 -5.726 1.00 0.00 C </line>
<line>ATOM 540 CA LEU A 34 -9.104 3.462 -4.694 1.00 0.00 C </line>
<line>ATOM 559 CA ASN A 35 -12.202 5.466 -5.621 1.00 0.00 C </line>
<line>ATOM 573 CA SER A 36 -12.341 8.669 -7.668 1.00 0.00 C </line>
<line>ATOM 584 CA THR A 37 -16.096 8.687 -8.270 1.00 0.00 C </line>
<line>ATOM 598 CA ASN A 38 -16.155 12.140 -6.676 1.00 0.00 C </line>
<line>ATOM 612 CA LYS A 39 -14.332 15.307 -7.732 1.00 0.00 C </line>
<line>ATOM 634 CA ASP A 40 -13.888 16.961 -4.336 1.00 0.00 C </line>
<line>ATOM 646 CA TRP A 41 -13.392 13.994 -2.008 1.00 0.00 C </line>
</atom-coordinate>
<distance-map>
<line> TRP ASP LYS ASN THR SER ASN LEU LEU THR </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>THR CA 13.93 16.27 15.80 15.13 14.07 10.55 9.08 5.95 3.80 </line>
<line>LEU CA 11.25 13.35 12.39 11.55 10.35 6.77 5.79 3.80 </line>
<line>LEU CA 11.68 14.33 13.30 11.36 9.43 6.81 3.80 </line>
<line>ASN CA 9.34 11.69 10.29 7.83 5.71 3.80 </line>
<line>SER CA 7.84 9.07 6.93 5.25 3.80 </line>
<line>THR CA 8.64 9.42 6.87 3.80 </line>
<line>ASN CA 5.73 5.82 3.80 </line>
<line>LYS CA 5.95 3.80 </line>
<line>ASP CA 3.80 </line>
<line>TRP CA </line>
</distance-map>
<n14>
<line>THR CA 692</line>
<line>LEU CA 711</line>
<line>LEU CA 603</line>
<line>ASN CA 517</line>
<line>SER CA 506</line>
<line>THR CA 334</line>
<line>ASN CA 372</line>
<line>LYS CA 376</line>
<line>ASP CA 424</line>
<line>TRP CA 566</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1CSK</pdbID>
<pdbChain>C</pdbChain>
<entryIDChain>1CSKC</entryIDChain>
<sequence>TIVAVTKDPNW</sequence>
<secondary-structure>EEEE E</secondary-structure>
<atom-coordinate>
<line>ATOM 1115 CA THR C 37 5.222 67.050 26.534 1.00 23.63 C </line>
<line>ATOM 1122 CA ILE C 38 7.788 69.843 26.185 1.00 23.97 C </line>
<line>ATOM 1130 CA VAL C 39 9.621 70.128 29.456 1.00 24.41 C </line>
<line>ATOM 1137 CA ALA C 40 12.358 72.664 28.744 1.00 24.68 C </line>
<line>ATOM 1142 CA VAL C 41 13.646 75.095 26.231 1.00 23.73 C </line>
<line>ATOM 1149 CA THR C 42 17.197 74.735 24.935 1.00 24.33 C </line>
<line>ATOM 1156 CA LYS C 43 19.828 77.288 23.888 1.00 23.29 C </line>
<line>ATOM 1165 CA ASP C 44 18.794 76.664 20.285 1.00 23.77 C </line>
<line>ATOM 1173 CA PRO C 45 15.191 77.739 19.465 1.00 22.08 C </line>
<line>ATOM 1180 CA ASN C 46 15.000 74.830 17.015 1.00 17.70 C </line>
<line>ATOM 1188 CA TRP C 47 15.323 72.262 19.730 1.00 12.82 C </line>
</atom-coordinate>
<distance-map>
<line> TRP ASN PRO ASP LYS THR VAL ALA VAL ILE THR </line>
<line> CA CA CA CA CA CA CA CA CA CA CA </line>
<line>THR CA 13.25 15.71 16.24 17.77 18.03 14.32 11.65 9.34 6.11 3.81 </line>
<line>ILE CA 10.21 12.69 12.74 14.23 14.34 10.68 7.87 5.95 3.76 </line>
<line>VAL CA 11.47 14.35 13.74 14.52 13.65 9.95 7.16 3.80 </line>
<line>ALA CA 9.50 12.22 10.95 11.36 10.04 6.50 3.73 </line>
<line>VAL CA 7.29 9.32 7.43 8.02 6.97 3.80 </line>
<line>THR CA 6.06 8.22 6.56 5.28 3.81 </line>
<line>LYS CA 7.93 8.75 6.42 3.80 </line>
<line>ASP CA 5.63 5.33 3.85 </line>
<line>PRO CA 5.48 3.81 </line>
<line>ASN CA 3.75 </line>
<line>TRP CA </line>
</distance-map>
<n14>
<line>THR CA 291</line>
<line>ILE CA 313</line>
<line>VAL CA 243</line>
<line>ALA CA 220</line>
<line>VAL CA 210</line>
<line>THR CA 185</line>
<line>LYS CA 127</line>
<line>ASP CA 146</line>
<line>PRO CA 154</line>
<line>ASN CA 201</line>
<line>TRP CA 284</line>
</n14>
</entryChain>
<parallel>
<x>-24.052000045776367</x>
<y>-65.2699966430664</y>
<z>-31.405000686645508</z>
</parallel>
<rotation>
<x>-0.953000009059906</x>
<y>0.05999999865889549</y>
<z>0.29600000381469727</z>
<x>-0.2720000147819519</x>
<y>0.25699999928474426</y>
<z>-0.9269999861717224</z>
<x>-0.13199999928474426</x>
<y>-0.9639999866485596</y>
<z>-0.2290000021457672</z>
</rotation>
<rmsd>1.8559880256652832</rmsd>
<dmax>3.4498000144958496</dmax>
</indel>