NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | 利用許諾 | ヘルプ
タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
1CLMA-1CFCA
confEVID 1CLMA-1CFCA
pdbIDA 1CLM
pdbIDB 1CFC
pdbChainA A
pdbChainB A
identity 0.848299980163574
indelSize 1
alignment <alignment>
<seq1>---LTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHIN-YEEFVRMMVS</seq1>
<seq2>ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK</seq2>
<ss_1>--- HHHHHHHHHHHHHH EEE HHHHHHHHHH HHHHHHHHH EEEHHHHHHHHHHHHHHHHHHHHHHHHHHH HHHHHHHHHH HHHHHHHHH -HHHHHHH </ss_1>
<ss_2> HHHHHHHHHHHGGG EEEEE HHHHHHH HHHHHHHHHHH EEEEEHHHHHHHHHH HHHHHHHHHH EEEHHHHHHHHH HHHHHHHHHH EEE HHHHHHHH </ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>1CLM</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1CLMA</entryIDChain>
<sequence>DGHIN-YEEFV</sequence>
<secondary-structure> -HHHHH</secondary-structure>
<atom-coordinate>
<line>ATOM 1008 CA ASP A 133 20.143 23.503 5.180 1.00 26.67 C </line>
<line>ATOM 1016 CA GLY A 134 18.337 20.064 4.769 1.00 26.32 C </line>
<line>ATOM 1020 CA HIS A 135 16.602 20.532 8.178 1.00 25.63 C </line>
<line>ATOM 1030 CA ILE A 136 13.100 21.737 9.081 1.00 21.17 C </line>
<line>ATOM 1038 CA ASN A 137 13.044 24.755 11.468 1.00 18.63 C </line>
<line>ATOM 1046 CA TYR A 138 9.838 26.007 13.160 1.00 19.49 C </line>
<line>ATOM 1058 CA GLU A 139 8.881 28.470 10.492 1.00 20.88 C </line>
<line>ATOM 1067 CA GLU A 140 9.289 25.874 7.745 1.00 17.84 C </line>
<line>ATOM 1076 CA PHE A 141 7.198 23.466 9.904 1.00 21.05 C </line>
<line>ATOM 1087 CA VAL A 142 4.205 25.769 10.383 1.00 27.46 C </line>
</atom-coordinate>
<distance-map>
<line> VAL PHE GLU GLU TYR ASN ILE HIS GLY ASP </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>ASP CA 16.92 13.78 11.40 13.41 13.27 9.57 8.24 5.51 3.91 </line>
<line>GLY CA 16.24 12.73 11.16 13.89 13.34 9.74 6.99 3.85 </line>
<line>HIS CA 13.64 10.00 9.07 11.31 10.03 6.43 3.81 </line>
<line>ILE CA 9.85 6.20 5.78 8.07 6.75 3.85 </line>
<line>ASN CA 8.96 6.19 5.40 5.66 3.84 </line>
<line>TYR CA 6.28 4.90 5.44 3.76 </line>
<line>GLU CA 5.40 5.31 3.80 </line>
<line>GLU CA 5.73 3.85 </line>
<line>PHE CA 3.81 </line>
<line>VAL CA </line>
</distance-map>
<n14>
<line>ASP CA 179</line>
<line>GLY CA 244</line>
<line>HIS CA 306</line>
<line>ILE CA 354</line>
<line>ASN CA 314</line>
<line>TYR CA 316</line>
<line>GLU CA 262</line>
<line>GLU CA 283</line>
<line>PHE CA 336</line>
<line>VAL CA 265</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1CFC</pdbID>
<pdbChain>A</pdbChain>
<entryIDChain>1CFCA</entryIDChain>
<sequence>DGQVNYEEFVQ</sequence>
<secondary-structure> EEE HHHHH</secondary-structure>
<atom-coordinate>
<line>ATOM 2013 CA ASP A 133 39.351 19.020 2.645 1.00 0.73 C </line>
<line>ATOM 2025 CA GLY A 134 37.476 19.356 5.962 1.00 0.06 C </line>
<line>ATOM 2032 CA GLN A 135 33.936 20.417 4.945 1.00 0.14 C </line>
<line>ATOM 2049 CA VAL A 136 31.444 18.524 2.726 1.00 0.21 C </line>
<line>ATOM 2065 CA ASN A 137 28.141 19.407 1.037 1.00 0.46 C </line>
<line>ATOM 2079 CA TYR A 138 25.009 17.415 1.984 1.00 0.38 C </line>
<line>ATOM 2100 CA GLU A 139 23.282 16.816 -1.433 1.00 0.48 C </line>
<line>ATOM 2115 CA GLU A 140 25.448 13.672 -1.680 1.00 0.34 C </line>
<line>ATOM 2130 CA PHE A 141 24.712 12.606 1.918 1.00 0.36 C </line>
<line>ATOM 2150 CA VAL A 142 20.999 13.415 1.407 1.00 0.35 C </line>
<line>ATOM 2166 CA GLN A 143 20.557 10.913 -1.446 1.00 0.27 C </line>
</atom-coordinate>
<distance-map>
<line> GLN VAL PHE GLU GLU TYR ASN VAL GLN GLY ASP </line>
<line> CA CA CA CA CA CA CA CA CA CA CA </line>
<line>ASP CA 20.87 19.23 16.00 15.51 16.72 14.45 11.33 7.92 6.05 3.83 </line>
<line>GLY CA 20.31 18.10 14.99 15.34 16.21 13.23 10.55 6.90 3.83 </line>
<line>GLN CA 17.61 15.13 12.46 12.71 12.93 9.87 7.06 3.84 </line>
<line>VAL CA 13.92 11.70 9.00 8.88 9.32 6.57 3.81 </line>
<line>ASN CA 11.65 9.33 7.67 6.89 6.04 3.83 </line>
<line>TYR CA 8.59 5.69 4.82 5.26 3.88 </line>
<line>GLU CA 6.50 4.98 5.57 3.83 </line>
<line>GLU CA 5.62 5.42 3.82 </line>
<line>PHE CA 5.61 3.83 </line>
<line>VAL CA 3.82 </line>
<line>GLN CA </line>
</distance-map>
<n14>
<line>ASP CA 240</line>
<line>GLY CA 314</line>
<line>GLN CA 465</line>
<line>VAL CA 576</line>
<line>ASN CA 642</line>
<line>TYR CA 767</line>
<line>GLU CA 643</line>
<line>GLU CA 614</line>
<line>PHE CA 770</line>
<line>VAL CA 766</line>
<line>GLN CA 639</line>
</n14>
</entryChain>
<parallel>
<x>-16.819000244140625</x>
<y>6.390999794006348</y>
<z>6.74399995803833</z>
</parallel>
<rotation>
<x>0.8309999704360962</x>
<y>0.009999999776482582</y>
<z>-0.5559999942779541</z>
<x>0.4779999852180481</x>
<y>-0.5249999761581421</y>
<z>0.7039999961853027</z>
<x>-0.2849999964237213</x>
<y>-0.8510000109672546</y>
<z>-0.4410000145435333</z>
</rotation>
<rmsd>1.7001229524612427</rmsd>
<dmax>2.905019998550415</dmax>
</indel>