1CLPB-2NOTA | |
confEVID | 1CLPB-2NOTA |
pdbIDA | 1CLP |
pdbIDB | 2NOT |
pdbChainA | B |
pdbChainB | A |
identity | 0.286900013685226 |
indelSize | 2 |
alignment | <alignment> <seq1>SLFELGKMILQETG--KNPAKSYGAYGCNCGVLGRGKPKDATDRCCYVHKCCYKKL--TGCNPKKDRYSYSWKDKTIVCGEN-NSCLKELCECDKAVAICLRENLNTYNKKYRYYLKPLCKKADAC</seq1> <seq2>NLVQFSYLIQCANHGRRPT-RHYMDYGCYCGWGGSGTPVDELDRCCKIHDDCYSDAEKKGCSPKMSAYDYYCGENGPYCRNIKKKCLRFVCDCDVEAAFCFAKA--PYNNANWNIDTKKRCQ----</seq2> <ss_1> HHHHHHHHH -- GGG HHHHHHHHHHHHHHH -- EEEEE EEE - HHHHHHHHHHHHHHHHHHHGGG GGG </ss_1> <ss_2> HHHHHHHHHH -HHHH HHHHHHHHHHHHHHHHH HHHH EEE EEE HHHHHHHHHHHHHHHHHHH -- GGG HHHH ----</ss_2> </alignment> |
indel | <indel> <confEVID></confEVID> <index>0</index> <entryChain> <pdbID>1CLP</pdbID> <pdbChain>B</pdbChain> <entryIDChain>1CLPB</entryIDChain> <sequence>VCGEN-NSCLK</sequence> <secondary-structure>E - HHH</secondary-structure> <atom-coordinate> <line>ATOM 1519 CA VAL B 83 46.419 13.407 -22.637 1.00 2.01 C </line> <line>ATOM 1526 CA CYS B 84 46.977 12.465 -19.003 1.00 6.32 C </line> <line>ATOM 1532 CA GLY B 86 48.266 14.784 -16.374 1.00 16.16 C </line> <line>ATOM 1536 CA GLU B 87 47.579 13.755 -12.795 1.00 29.22 C </line> <line>ATOM 1545 CA ASN B 88 51.327 13.288 -12.098 1.00 31.40 C </line> <line>ATOM 1553 CA ASN B 89 50.222 11.235 -9.134 1.00 24.78 C </line> <line>ATOM 1561 CA SER B 90 52.505 8.391 -10.117 1.00 22.83 C </line> <line>ATOM 1567 CA CYS B 91 49.711 5.935 -9.608 1.00 23.64 C </line> <line>ATOM 1573 CA LEU B 92 46.910 8.055 -10.967 1.00 21.37 C </line> <line>ATOM 1581 CA LYS B 93 49.176 9.094 -13.882 1.00 16.11 C </line> </atom-coordinate> <distance-map> <line> LYS LEU CYS SER ASN ASN GLU GLY CYS VAL </line> <line> CA CA CA CA CA CA CA CA CA CA </line> <line>VAL CA 10.14 12.85 15.38 14.80 14.20 11.63 9.92 6.67 3.80 </line> <line>CYS CA 6.51 9.17 11.76 11.23 10.46 8.20 6.37 3.74 </line> <line>GLY CA 6.28 8.74 11.23 9.90 8.30 5.47 3.79 </line> <line>GLU CA 5.05 6.02 8.71 7.76 5.17 3.84 </line> <line>ASN CA 5.04 6.94 7.93 5.41 3.77 </line> <line>ASN CA 5.31 4.94 5.35 3.78 </line> <line>SER CA 5.07 5.67 3.75 </line> <line>CYS CA 5.34 3.77 </line> <line>LEU CA 3.84 </line> <line>LYS CA </line> </distance-map> <n14> <line>VAL CA 264</line> <line>CYS CA 293</line> <line>GLY CA 219</line> <line>GLU CA 227</line> <line>ASN CA 173</line> <line>ASN CA 190</line> <line>SER CA 198</line> <line>CYS CA 251</line> <line>LEU CA 307</line> <line>LYS CA 289</line> </n14> </entryChain> <entryChain> <pdbID>2NOT</pdbID> <pdbChain>A</pdbChain> <entryIDChain>2NOTA</entryIDChain> <sequence>YCRNIKKKCLR</sequence> <secondary-structure>E HHHH</secondary-structure> <atom-coordinate> <line>ATOM 599 CA TYR A 83 12.025 14.652 25.615 1.00 2.00 C </line> <line>ATOM 611 CA CYS A 84 8.703 16.412 26.107 1.00 2.00 C </line> <line>ATOM 617 CA ARG A 85 6.963 18.363 23.377 1.00 5.31 C </line> <line>ATOM 628 CA ASN A 86 4.109 20.093 25.261 1.00 3.46 C </line> <line>ATOM 636 CA ILE A 87 4.442 23.825 25.984 1.00 2.00 C </line> <line>ATOM 644 CA LYS A 88 0.857 25.103 26.105 1.00 10.64 C </line> <line>ATOM 653 CA LYS A 89 -1.077 22.111 27.532 1.00 3.56 C </line> <line>ATOM 662 CA LYS A 90 0.469 22.679 30.983 1.00 3.71 C </line> <line>ATOM 671 CA CYS A 91 -0.675 19.578 32.934 1.00 4.58 C </line> <line>ATOM 677 CA LEU A 92 0.513 17.277 30.127 1.00 2.00 C </line> <line>ATOM 685 CA ARG A 93 3.949 18.922 30.198 1.00 2.00 C </line> </atom-coordinate> <distance-map> <line> ARG LEU CYS LYS LYS LYS ILE ASN ARG CYS TYR </line> <line> CA CA CA CA CA CA CA CA CA CA CA </line> <line>TYR CA 10.22 12.64 15.46 15.06 15.20 15.30 11.91 9.61 6.66 3.79 </line> <line>CYS CA 6.76 9.16 12.02 11.44 11.41 11.71 8.55 5.95 3.78 </line> <line>ARG CA 7.48 9.40 12.29 10.89 9.80 9.49 6.56 3.83 </line> <line>ASN CA 5.08 6.67 9.06 7.26 6.01 6.03 3.82 </line> <line>ILE CA 6.48 8.69 9.62 6.49 5.98 3.81 </line> <line>LYS CA 8.03 8.81 8.92 5.46 3.84 </line> <line>LYS CA 6.52 5.71 5.98 3.82 </line> <line>LYS CA 5.18 5.47 3.84 </line> <line>CYS CA 5.41 3.82 </line> <line>LEU CA 3.81 </line> <line>ARG CA </line> </distance-map> <n14> <line>TYR CA 305</line> <line>CYS CA 309</line> <line>ARG CA 237</line> <line>ASN CA 221</line> <line>ILE CA 168</line> <line>LYS CA 133</line> <line>LYS CA 189</line> <line>LYS CA 215</line> <line>CYS CA 276</line> <line>LEU CA 315</line> <line>ARG CA 319</line> </n14> </entryChain> <parallel> <x>44.75600051879883</x> <y>-8.057000160217285</y> <z>-41.19499969482422</z> </parallel> <rotation> <x>0.28700000047683716</x> <y>0.22300000488758087</y> <z>-0.9319999814033508</z> <x>0.8759999871253967</x> <y>0.3319999873638153</y> <z>0.3499999940395355</z> <x>0.3880000114440918</x> <y>-0.9160000085830688</y> <z>-0.10000000149011612</z> </rotation> <rmsd>0.9465169906616211</rmsd> <dmax>1.347983956336975</dmax> </indel> <indel> <confEVID></confEVID> <index>1</index> <entryChain> <pdbID>2NOT</pdbID> <pdbChain>A</pdbChain> <entryIDChain>2NOTA</entryIDChain> <sequence>CFAKA--PYNNA</sequence> <secondary-structure>HHHH -- GG</secondary-structure> <atom-coordinate> <line>ATOM 779 CA CYS A 105 17.365 8.881 36.705 1.00 2.00 C </line> <line>ATOM 785 CA PHE A 106 16.671 5.115 36.514 1.00 2.00 C </line> <line>ATOM 796 CA ALA A 107 19.189 4.693 33.684 1.00 5.40 C </line> <line>ATOM 801 CA LYS A 108 22.046 6.687 35.174 1.00 6.66 C </line> <line>ATOM 810 CA ALA A 109 21.458 5.127 38.617 1.00 2.00 C </line> <line>ATOM 815 CA PRO A 110 23.196 1.856 39.636 1.00 2.00 C </line> <line>ATOM 822 CA TYR A 111 21.020 -1.165 40.048 1.00 2.00 C </line> <line>ATOM 834 CA ASN A 112 21.683 -3.308 43.127 1.00 2.00 C </line> <line>ATOM 842 CA ASN A 113 20.080 -6.685 42.302 1.00 2.00 C </line> <line>ATOM 850 CA ALA A 114 20.191 -7.202 46.080 1.00 4.99 C </line> </atom-coordinate> <distance-map> <line> ALA ASN ASN TYR PRO ALA LYS ALA PHE CYS </line> <line> CA CA CA CA CA CA CA CA CA CA </line> <line>CYS CA 18.83 16.76 14.44 11.20 9.59 5.87 5.39 5.48 3.83 </line> <line>PHE CA 15.99 13.58 11.82 8.42 7.93 5.23 5.76 3.81 </line> <line>ALA CA 17.21 14.30 12.63 8.84 7.72 5.45 3.79 </line> <line>LYS CA 17.76 15.28 12.78 9.30 6.68 3.83 </line> <line>ALA CA 14.47 12.45 9.57 6.47 3.84 </line> <line>PRO CA 11.52 9.47 6.41 3.75 </line> <line>TYR CA 8.57 6.04 3.81 </line> <line>ASN CA 5.11 3.83 </line> <line>ASN CA 3.81 </line> <line>ALA CA </line> </distance-map> <n14> <line>CYS CA 363</line> <line>PHE CA 434</line> <line>ALA CA 342</line> <line>LYS CA 272</line> <line>ALA CA 292</line> <line>PRO CA 255</line> <line>TYR CA 299</line> <line>ASN CA 255</line> <line>ASN CA 229</line> <line>ALA CA 202</line> </n14> </entryChain> <entryChain> <pdbID>1CLP</pdbID> <pdbChain>B</pdbChain> <entryIDChain>1CLPB</entryIDChain> <sequence>CLRENLNTYNKK</sequence> <secondary-structure>HHHHHGGG GG</secondary-structure> <atom-coordinate> <line>ATOM 1670 CA CYS B 105 43.209 -0.961 -28.540 1.00 5.01 C </line> <line>ATOM 1676 CA LEU B 106 39.400 -0.977 -28.579 1.00 5.12 C </line> <line>ATOM 1684 CA ARG B 107 38.650 1.442 -31.420 1.00 8.04 C </line> <line>ATOM 1695 CA GLU B 108 41.799 0.274 -33.098 1.00 5.88 C </line> <line>ATOM 1704 CA ASN B 109 40.210 -3.153 -33.229 1.00 6.40 C </line> <line>ATOM 1712 CA LEU B 110 36.761 -1.647 -33.521 1.00 11.92 C </line> <line>ATOM 1720 CA ASN B 111 36.728 -2.971 -37.035 1.00 17.00 C </line> <line>ATOM 1728 CA THR B 112 36.647 -6.667 -36.303 1.00 13.51 C </line> <line>ATOM 1735 CA TYR B 113 34.647 -6.533 -33.112 1.00 13.62 C </line> <line>ATOM 1747 CA ASN B 114 32.065 -9.236 -33.427 1.00 15.77 C </line> <line>ATOM 1755 CA LYS B 115 28.781 -8.656 -31.685 1.00 18.50 C </line> <line>ATOM 1764 CA LYS B 116 28.804 -12.447 -31.021 1.00 21.73 C </line> </atom-coordinate> <distance-map> <line> LYS LYS ASN TYR THR ASN LEU ASN GLU ARG LEU CYS </line> <line> CA CA CA CA CA CA CA CA CA CA CA CA </line> <line>CYS CA 18.59 16.65 14.72 11.19 11.66 10.87 8.18 5.98 4.93 5.90 3.81 </line> <line>LEU CA 15.81 13.47 12.06 8.60 9.98 9.09 5.64 5.20 5.27 3.81 </line> <line>ARG CA 17.03 14.12 12.70 9.08 9.68 7.40 4.19 5.18 3.75 </line> <line>GLU CA 18.30 15.85 13.61 9.87 9.22 7.19 5.41 3.78 </line> <line>ASN CA 14.88 12.78 10.17 6.51 5.87 5.16 3.77 </line> <line>LEU CA 13.65 10.78 8.92 5.34 5.74 3.76 </line> <line>ASN CA 13.74 11.14 8.60 5.69 3.77 </line> <line>THR CA 11.08 9.34 5.99 3.77 </line> <line>TYR CA 8.57 6.40 3.75 </line> <line>ASN CA 5.17 3.76 </line> <line>LYS CA 3.85 </line> <line>LYS CA </line> </distance-map> <n14> <line>CYS CA 358</line> <line>LEU CA 404</line> <line>ARG CA 326</line> <line>GLU CA 255</line> <line>ASN CA 277</line> <line>LEU CA 298</line> <line>ASN CA 203</line> <line>THR CA 223</line> <line>TYR CA 315</line> <line>ASN CA 256</line> <line>LYS CA 251</line> <line>LYS CA 223</line> </n14> </entryChain> <parallel> <x>-18.0</x> <y>6.711999893188477</y> <z>70.1520004272461</z> </parallel> <rotation> <x>0.1289999932050705</x> <y>0.9819999933242798</y> <z>0.13699999451637268</z> <x>-0.09200000017881393</x> <y>0.15000000596046448</y> <z>-0.984000027179718</z> <x>-0.9869999885559082</x> <y>0.11400000005960464</y> <z>0.10999999940395355</z> </rotation> <rmsd>0.876816987991333</rmsd> <dmax>1.9080489873886108</dmax> </indel> |