NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | 利用許諾 | ヘルプ
タンパク質結合による構造変化のデータ | タンパク質結合による構造変化の補助データ | 進化的構造変化データ | 構造的ゆらぎデータ
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Data of conformation changes by some binding | Supplement data for conformation changes by some binding | Data of evolutionary structure change | Data of structural flexibility
1CT1F-3EFXL
confEVID 1CT1F-3EFXL
pdbIDA 1CT1
pdbIDB 3EFX
pdbChainA F
pdbChainB L
identity 0.85290002822876
indelSize 1
alignment <alignment>
<seq1>TPQNITDLCAEYHNTQIHTLNDKIFSYTESLARKREMAIITFKNGATFQVEVPGSQHIDSQKKAIERMKDTLRIAYLTEAKVEKLCVWNNKTPHAIAAISMAN</seq1>
<seq2>APQNITELCSEYHNTQIYTINDKILSYTESLAGKREMAIITFKNGATFQVEVPD-----SQKKAIERMKDTLRIAYLTEAKVEKLCVWNNKTPNSIAAISMA-</seq2>
<ss_1> HHHHGGG EEE EEE EEEEEE EEEEE HHHHHHHHHHHHHHHHHHH EEEEEEEEE EE EEE </ss_1>
<ss_2> HHHHGGG EEE EEE EEEEEE EEEEE ----- HHHHHHHHHHHHHHHHH EEEEEEE EE EEE -</ss_2>
</alignment>
indel <indel>
<confEVID></confEVID>
<index>0</index>
<entryChain>
<pdbID>3EFX</pdbID>
<pdbChain>L</pdbChain>
<entryIDChain>3EFXL</entryIDChain>
<sequence>VEVPD-----SQKKA</sequence>
<secondary-structure>E ----- HHHH</secondary-structure>
<atom-coordinate>
<line>ATOM 6264 CA VAL L 50 25.358 -10.866 7.518 1.00 18.75 C </line>
<line>ATOM 6271 CA GLU L 51 25.498 -10.892 3.704 1.00 22.81 C </line>
<line>ATOM 6280 CA VAL L 52 28.623 -10.060 1.744 1.00 27.70 C </line>
<line>ATOM 6287 CA PRO L 53 28.251 -6.508 0.360 1.00 31.11 C </line>
<line>ATOM 6294 CA ASP L 59 27.661 3.173 0.475 1.00 36.88 C </line>
<line>ATOM 6299 CA SER L 60 25.956 4.024 3.722 1.00 34.93 C </line>
<line>ATOM 6305 CA GLN L 61 25.052 0.344 3.298 1.00 30.35 C </line>
<line>ATOM 6310 CA LYS L 62 28.663 -0.950 3.166 1.00 25.89 C </line>
<line>ATOM 6315 CA LYS L 63 29.499 0.843 6.442 1.00 23.14 C </line>
<line>ATOM 6320 CA ALA L 64 26.284 -0.449 8.042 1.00 21.25 C </line>
</atom-coordinate>
<distance-map>
<line> ALA LYS LYS GLN SER ASP PRO VAL GLU VAL </line>
<line> CA CA CA CA CA CA CA CA CA CA </line>
<line>VAL CA 10.47 12.47 11.32 11.98 15.38 15.87 8.87 6.68 3.82 </line>
<line>GLU CA 11.34 12.70 10.45 11.25 14.92 14.59 6.16 3.78 </line>
<line>VAL CA 11.73 11.90 9.22 11.11 14.47 13.33 3.83 </line>
<line>PRO CA 9.98 9.62 6.24 8.11 11.29 9.70 </line>
<line>ASP CA 8.50 6.66 5.02 4.77 3.76 </line>
<line>SER CA 6.23 5.48 5.69 3.81 </line>
<line>GLN CA 4.97 5.47 3.84 </line>
<line>LYS CA 5.45 3.83 </line>
<line>LYS CA 3.82 </line>
<line>ALA CA </line>
</distance-map>
<n14>
<line>VAL CA 401</line>
<line>GLU CA 331</line>
<line>VAL CA 264</line>
<line>PRO CA 209</line>
<line>ASP CA 75</line>
<line>SER CA 94</line>
<line>GLN CA 154</line>
<line>LYS CA 157</line>
<line>LYS CA 142</line>
<line>ALA CA 200</line>
</n14>
</entryChain>
<entryChain>
<pdbID>1CT1</pdbID>
<pdbChain>F</pdbChain>
<entryIDChain>1CT1F</entryIDChain>
<sequence>VEVPGSQHIDSQKKA</sequence>
<secondary-structure>E HHHHHH</secondary-structure>
<atom-coordinate>
<line>ATOM 2044 CA VAL F 50 11.913 25.532 61.598 1.00 20.81 C </line>
<line>ATOM 2051 CA GLU F 51 9.741 24.135 58.827 1.00 17.46 C </line>
<line>ATOM 2060 CA VAL F 52 11.151 22.973 55.532 1.00 22.00 C </line>
<line>ATOM 2067 CA PRO F 53 10.031 25.710 53.111 1.00 28.36 C </line>
<line>ATOM 2074 CA GLY F 54 6.935 24.637 51.186 1.00 35.15 C </line>
<line>ATOM 2078 CA SER F 55 3.626 25.633 49.611 1.00 40.12 C </line>
<line>ATOM 2084 CA GLN F 56 2.300 27.333 52.754 1.00 34.70 C </line>
<line>ATOM 2093 CA HIS F 57 5.031 29.979 52.553 1.00 30.80 C </line>
<line>ATOM 2103 CA ILE F 58 5.240 32.937 50.184 1.00 40.53 C </line>
<line>ATOM 2111 CA ASP F 59 8.523 34.336 48.825 1.00 46.91 C </line>
<line>ATOM 2119 CA SER F 60 9.126 36.800 51.696 1.00 35.34 C </line>
<line>ATOM 2125 CA GLN F 61 8.794 33.891 54.121 1.00 30.14 C </line>
<line>ATOM 2134 CA LYS F 62 11.509 31.771 52.435 1.00 30.27 C </line>
<line>ATOM 2143 CA LYS F 63 14.202 34.358 53.214 1.00 26.42 C </line>
<line>ATOM 2152 CA ALA F 64 12.834 34.861 56.730 1.00 17.11 C </line>
</atom-coordinate>
<distance-map>
<line> ALA LYS LYS GLN SER ASP ILE HIS GLN SER GLY PRO VAL GLU VAL </line>
<line> CA CA CA CA CA CA CA CA CA CA CA CA CA CA CA </line>
<line>VAL CA 10.56 12.39 11.09 11.64 15.26 15.88 15.15 12.20 13.19 14.57 11.58 8.69 6.63 3.79 </line>
<line>GLU CA 11.36 12.49 10.11 10.87 14.55 14.34 13.13 9.78 10.12 11.16 8.16 5.94 3.77 </line>
<line>VAL CA 12.07 12.01 9.33 11.26 14.49 13.45 12.76 9.77 10.25 9.94 6.28 3.82 </line>
<line>PRO CA 10.23 9.60 6.28 8.34 11.22 9.75 9.15 6.60 7.91 7.30 3.80 </line>
<line>GLY CA 13.04 12.31 8.57 9.88 12.37 10.11 8.53 5.83 5.59 3.80 </line>
<line>SER CA 14.85 14.18 10.38 10.74 12.62 10.02 7.50 5.43 3.81 </line>
<line>GLN CA 13.54 13.83 10.23 9.33 11.72 10.16 6.83 3.81 </line>
<line>HIS CA 10.11 10.18 6.72 5.65 8.00 6.71 3.80 </line>
<line>ILE CA 10.21 9.57 6.76 5.39 5.68 3.82 </line>
<line>ASP CA 9.02 7.18 5.34 5.32 3.83 </line>
<line>SER CA 6.55 5.83 5.61 3.80 </line>
<line>GLN CA 4.91 5.50 3.84 </line>
<line>LYS CA 5.45 3.81 </line>
<line>LYS CA 3.81 </line>
<line>ALA CA </line>
</distance-map>
<n14>
<line>VAL CA 431</line>
<line>GLU CA 373</line>
<line>VAL CA 316</line>
<line>PRO CA 270</line>
<line>GLY CA 213</line>
<line>SER CA 134</line>
<line>GLN CA 181</line>
<line>HIS CA 191</line>
<line>ILE CA 140</line>
<line>ASP CA 127</line>
<line>SER CA 144</line>
<line>GLN CA 211</line>
<line>LYS CA 207</line>
<line>LYS CA 185</line>
<line>ALA CA 233</line>
</n14>
</entryChain>
<parallel>
<x>16.982999801635742</x>
<y>-32.14799880981445</y>
<z>-51.814998626708984</z>
</parallel>
<rotation>
<x>0.7639999985694885</x>
<y>-0.16699999570846558</y>
<z>0.6230000257492065</z>
<x>-0.2759999930858612</x>
<y>0.7889999747276306</y>
<z>0.550000011920929</z>
<x>-0.5830000042915344</x>
<y>-0.5920000076293945</y>
<z>0.5559999942779541</z>
</rotation>
<rmsd>3.228332996368408</rmsd>
<dmax>8.0005464553833</dmax>
</indel>