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Dicty_cDB
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NBDC - LSDB Archive
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Dicty_cDB
Contig List | Clone List | cDNA Library List
Atlas
Atlas | Atlas Image List
CFG849
Library CF
(Link to library)
Clone ID CFG849
Atlas ID -
NBRP ID -
dictyBase ID -
Link to Contig Contig-U13828-1
Original site URL
Representative seq. ID CFG849P
(Link to Original site)
Representative DNA sequence 
>CFG849 (CFG849Q) /CSM/CF/CFG8-C/CFG849Q.Seq.d/
TTTTTTTTATTTATTTATTTTTTATATTTATTAAGTATTACAACAATACTCACACCCCCA
AATAAAACATAAAAACATCTATTAATATTTGAACTTTTTTATAAATAATTACTATTTAAA
TTTTAATAATAATATAAATAAAGAAAACAACAACCTCAACAATAATAATAAAATGACATC
AACACCAGACTCTCGTTCAGTTTTAACAGTAATTATTTTAGGTGCATCAGGTGATCTTGC
AAAGAAAAAGACCTATCCAGCACTCTTTGGTTTATATCTTAGAGATTTGTTACCAAGCAA
CACAATCATTTATGGTTATGCTAGATCACATATTGAAATTGGTGATTTCAAAGCTAGAAT
CTCAAAAGGATTAAAAGGTGATGAAGAAAAGAAAAAACAATTTTTAAATTTATTACATTA
TCATTCAGGTAAATATGATGAAAAAGCATCCTATGATGAATTTGAAAAATTAATTTTAGC
AGAAGAAAAGAAACAACAAGGTGTTGATAAATTCAATCGTTTATTCTATATGGCAATTCC
ACCATCAATTTTCATTTGAAGTTAGTATTGGTATTCATGGTTCATTGATCTCAAAGXXXX
XXXXXXCAACCACTCCAACCTATGCTGCCGCTGTTTTCCATATCAATAATCCAAGATGGA
GAGGTATGCCATTCATCTTAAAATGTGGTAAAGCTTTAGATGAAAGAAAAACTGAAGTTA
GAATTCAATTCAAACGTCCAGATAACTTTTTATTCTCTGATGATGATATCTCAAGAAATG
AATTAGTTATGAGAATTCAACCAGGTGAAGCTGTTTACTTAAAATTATTATCAAAGAAAC
CAGGTTTAGAAAATAAAATTGAACAAACTGAATTAGATTTATCATATCGTCATAGATTTG
AAAATCTTGATTTACCAGATGCATATGAACGTTTAATTCTTGATTCAATTAAAGGTGATC
ATAACCTTTTCGTCAGAGATGATGAATTAGATGTTGCATGGCAAATATTTACACCATTAC
TCGATCAAATTGAAAAAGAAAAGATTAAACCTGAACCATATTCCTTTGGTTCACGTGGTC
CAAAATCTGCTGATGAATTATCAAAGAAATTTGGTTTCATTAGATCCTTAGGTTATAATT
GGCCAGGTAATTCTCCACAAGGTAGTAAAAAATAAATAAAGTTTTTTAAAAATGTCAAAA
AAAAAGACAAACAAGATTATCCAAATACCAGA
sequence update 2001. 6. 1
Translated Amino Acid sequence 
ffiylffifikyynnthtpk*niktsini*tfl*iiti*iliii*ikktttstiiik*hq
hqtlvqf*q*lf*vhqvilqrkrpiqhslvyileicyqatqsfmvmldhilklviskles
qkd*kvmkkrknnf*iyyiiiqvnmmkkhpmmnlkn*f*QKKRNNKVLINSIVYSIWQFH
HQFSFEVSIGIHGSLISK---

---TTPTYAAAVFHINNPRWRGMPFILKCGKALDERKTEVRIQFKRPDNFLFSDDDISRN
ELVMRIQPGEAVYLKLLSKKPGLENKIEQTELDLSYRHRFENLDLPDAYERLILDSIKGD
HNLFVRDDELDVAWQIFTPLLDQIEKEKIKPEPYSFGSRGPKSADELSKKFGFIRSLGYN
WPGNSPQGSKK*ikffknvkkkdkqdypntr
Translated Amino Acid sequence (All Frames) 
Frame A:
fflfiyflyllsittiltppnkt*khllifelfyk*llfkf***yk*rkqqpqq***ndi
ntrlsfsfnsnyfrcir*sckekdlsstlwfis*rfvtkqhnhlwlc*ity*nw*fqs*n
lkrikr**rkektifkfitlsfr*i**ksil**i*kinfsrrkettrc**iqsfilygns
tinfhlklvlvfmvh*sq---

---qplqpmlplfsisiiqdgevchss*nvvkl*mkeklklefnsnvqitfyslmmisqe
mn*l*efnqvklft*nyyqrnqv*kiklnkln*iyhividlkiliyqmhmnv*fliqlkv
iitfssemmn*mlhgkylhhysiklkkkrlnlnhiplvhvvqnllmnyqrnlvsldp*vi
igqvilhkvvknk*sflkmskkktnkiiqip

Frame B:
ffylfifyiy*vlqqyshpqikhkniy*ylnffinnyylnfnnninkennnlnnnnkmts
tpdsrsvltviilgasgdlakkktypalfglylrdllpsntiiygyarshieigdfkari
skglkgdeekkkqflnllhyhsgkydekasydefeklilaeekkqqgvdkfnrlfymaip
psifi*s*ywyswfidlk---

---nhsnlccrcfpyq*skmeryaihlkmw*sfr*kkn*s*nsiqtsr*lfil***ylkk
*isyenstr*scllkiiiketrfrk*n*tn*irfiiss*i*ks*ftrci*tfns*fn*r*
s*pfrqr**irccmaniytitrsn*krkd*t*tiflwftwskic**iikeiwfh*ilrl*
lar*fstr**kinkvf*kcqkkrqtrlskyq

Frame C:
ffiylffifikyynnthtpk*niktsini*tfl*iiti*iliii*ikktttstiiik*hq
hqtlvqf*q*lf*vhqvilqrkrpiqhslvyileicyqatqsfmvmldhilklviskles
qkd*kvmkkrknnf*iyyiiiqvnmmkkhpmmnlkn*f*QKKRNNKVLINSIVYSIWQFH
HQFSFEVSIGIHGSLISK---

---TTPTYAAAVFHINNPRWRGMPFILKCGKALDERKTEVRIQFKRPDNFLFSDDDISRN
ELVMRIQPGEAVYLKLLSKKPGLENKIEQTELDLSYRHRFENLDLPDAYERLILDSIKGD
HNLFVRDDELDVAWQIFTPLLDQIEKEKIKPEPYSFGSRGPKSADELSKKFGFIRSLGYN
WPGNSPQGSKK*ikffknvkkkdkqdypntr
Homology vs CSM-cDNA 

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CFG849 (CFG849Q) /CSM/CF/CFG8-C/CFG849Q.Seq.d/                       1970   0.0
SFJ510 (SFJ510Q) /CSM/SF/SFJ5-A/SFJ510Q.Seq.d/                       1108   0.0
SFE860 (SFE860Q) /CSM/SF/SFE8-C/SFE860Q.Seq.d/                       1108   0.0
CHO540 (CHO540Q) /CSM/CH/CHO5-B/CHO540Q.Seq.d/                       1108   0.0
CFF418 (CFF418Q) /CSM/CF/CFF4-A/CFF418Q.Seq.d/                       1108   0.0
CFC620 (CFC620Q) /CSM/CF/CFC6-A/CFC620Q.Seq.d/                       1108   0.0
AFO875 (AFO875Q) /CSM/AF/AFO8-D/AFO875Q.Seq.d/                       1108   0.0
AFM588 (AFM588Q) /CSM/AF/AFM5-D/AFM588Q.Seq.d/                       1108   0.0
AFI751 (AFI751Q) /CSM/AF/AFI7-C/AFI751Q.Seq.d/                       1108   0.0
AFG395 (AFG395Q) /CSM/AF/AFG3-D/AFG395Q.Seq.d/                       1108   0.0
own update 2009. 4. 4
Homology vs DNA 

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

AC115684|AC115684.2 Dictyostelium discoideum chromosome 2 map 3108975-3191114 strain AX4, complete sequence.   617   0.0    12
AL844509|AL844509.1 Plasmodium falciparum chromosome 13.           42   8e-13  24
AC116305|AC116305.2 Dictyostelium discoideum chromosome 2 map 1005175-1418323 strain AX4, complete sequence.    36   1e-11  24
AC116957|AC116957.2 Dictyostelium discoideum chromosome 2 map 1685067-2090751 strain AX4, complete sequence.    42   4e-10  26
AC116986|AC116986.2 Dictyostelium discoideum chromosome 2 map 2234041-2567370 strain AX4, complete sequence.    36   5e-09  21
AC117076|AC117076.2 Dictyostelium discoideum chromosome 2 map 5862124-6045772 strain AX4, complete sequence.    36   1e-08  17
AC116977|AC116977.2 Dictyostelium discoideum chromosome 2 map 5515173-5817331 strain AX4, complete sequence.    34   2e-08  21
AL844507|AL844507.1 Plasmodium falciparum chromosome 8.            40   7e-08  17
AC115579|AC115579.2 Dictyostelium discoideum chromosome 2 map 4915084-5005461 strain AX4, complete sequence.    36   8e-08  12
AC116984|AC116984.2 Dictyostelium discoideum chromosome 2 map 2567470-3108875 strain AX4, complete sequence.    36   1e-07  20
dna update 2004. 1.30
Homology vs Protein 

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(Q557D2) RecName: Full=Glucose-6-phosphate 1-dehydrogenase;     ...   384   e-105
AY845218_1(AY845218|pid:none) Ips typographus glucose-6-phosphat...   219   1e-55
AY845218_2(AY845218|pid:none) Ips typographus glucose-6-phosphat...   219   1e-55
AL442114_5(AL442114|pid:none) Oryza sativa genomic DNA, chromoso...   212   2e-53
AY364480_1(AY364480|pid:none) Drosophila arizonae glucose-6-phos...   211   4e-53
AY364526_1(AY364526|pid:none) Drosophila mojavensis strain MJS 1...   211   4e-53
AY078072_1(AY078072|pid:none) Oryza sativa (japonica cultivar-gr...   211   4e-53
EU968157_1(EU968157|pid:none) Zea mays clone 315627 unknown mRNA.     211   5e-53
BT071549_1(BT071549|pid:none) Picea sitchensis clone WS02924_D14...   211   5e-53
AB111437_1(AB111437|pid:none) Lethenteron reissneri G6PD mRNA fo...   209   2e-52
protein update 2009. 5.14
PSORT 

 psg: 0.86  gvh: 0.41  alm: 0.49  top: 0.30  tms: 0.00  mit: 0.34  mip: 0.10
 nuc: 0.00  erl: 0.00  erm: 0.40  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 36.0 %: cytoplasmic
	 32.0 %: nuclear
	 12.0 %: mitochondrial
	  8.0 %: vacuolar
	  4.0 %: extracellular, including cell wall
	  4.0 %: cytoskeletal
	  4.0 %: peroxisomal

>> prediction for CFG849 is cyt
5' end seq. ID CFG849F
5' end seq. 
>CFG849F.Seq
TTTTTTTTATTTATTTATTTTTTATATTTATTAAGTATTACAACAATACTCACACCCCCA
AATAAAACATAAAAACATCTATTAATATTTGAACTTTTTTATAAATAATTACTATTTAAA
TTTTAATAATAATATAAATAAAGAAAACAACAACCTCAACAATAATAATAAAATGACATC
AACACCAGACTCTCGTTCAGTTTTAACAGTAATTATTTTAGGTGCATCAGGTGATCTTGC
AAAGAAAAAGACCTATCCAGCACTCTTTGGTTTATATCTTAGAGATTTGTTACCAAGCAA
CACAATCATTTATGGTTATGCTAGATCACATATTGAAATTGGTGATTTCAAAGCTAGAAT
CTCAAAAGGATTAAAAGGTGATGAAGAAAAGAAAAAACAATTTTTAAATTTATTACATTA
TCATTCAGGTAAATATGATGAAAAAGCATCCTATGATGAATTTGAAAAATTAATTTTAGC
AGAAGAAAAGAAACAACAAGGTGTTGATAAATTCAATCGTTTATTCTATATGGCAATTCC
ACCATCAATTTTCATTTGAAGTTAGTATTGGTATTCATGGTTCATTGATCTCAAAG----
------
Length of 5' end seq. 596
3' end seq. ID CFG849Z
3' end seq. 
>CFG849Z.Seq
----------CAACCACTCCAACCTATGCTGCCGCTGTTTTCCATATCAATAATCCAAGA
TGGAGAGGTATGCCATTCATCTTAAAATGTGGTAAAGCTTTAGATGAAAGAAAAACTGAA
GTTAGAATTCAATTCAAACGTCCAGATAACTTTTTATTCTCTGATGATGATATCTCAAGA
AATGAATTAGTTATGAGAATTCAACCAGGTGAAGCTGTTTACTTAAAATTATTATCAAAG
AAACCAGGTTTAGAAAATAAAATTGAACAAACTGAATTAGATTTATCATATCGTCATAGA
TTTGAAAATCTTGATTTACCAGATGCATATGAACGTTTAATTCTTGATTCAATTAAAGGT
GATCATAACCTTTTCGTCAGAGATGATGAATTAGATGTTGCATGGCAAATATTTACACCA
TTACTCGATCAAATTGAAAAAGAAAAGATTAAACCTGAACCATATTCCTTTGGTTCACGT
GGTCCAAAATCTGCTGATGAATTATCAAAGAAATTTGGTTTCATTAGATCCTTAGGTTAT
AATTGGCCAGGTAATTCTCCACAAGGTAGTAAAAAATAAATAAAGTTTTTTAAAAATGTC
AAAAAAAAAGACAAACAAGATTATCCAAATACCAGA
Length of 3' end seq. 626
Connected seq. ID CFG849P
Connected seq. 
>CFG849P.Seq
TTTTTTTTATTTATTTATTTTTTATATTTATTAAGTATTACAACAATACTCACACCCCCA
AATAAAACATAAAAACATCTATTAATATTTGAACTTTTTTATAAATAATTACTATTTAAA
TTTTAATAATAATATAAATAAAGAAAACAACAACCTCAACAATAATAATAAAATGACATC
AACACCAGACTCTCGTTCAGTTTTAACAGTAATTATTTTAGGTGCATCAGGTGATCTTGC
AAAGAAAAAGACCTATCCAGCACTCTTTGGTTTATATCTTAGAGATTTGTTACCAAGCAA
CACAATCATTTATGGTTATGCTAGATCACATATTGAAATTGGTGATTTCAAAGCTAGAAT
CTCAAAAGGATTAAAAGGTGATGAAGAAAAGAAAAAACAATTTTTAAATTTATTACATTA
TCATTCAGGTAAATATGATGAAAAAGCATCCTATGATGAATTTGAAAAATTAATTTTAGC
AGAAGAAAAGAAACAACAAGGTGTTGATAAATTCAATCGTTTATTCTATATGGCAATTCC
ACCATCAATTTTCATTTGAAGTTAGTATTGGTATTCATGGTTCATTGATCTCAAAG----
------CAACCACTCCAACCTATGCTGCCGCTGTTTTCCATATCAATAATCCAAGATGGA
GAGGTATGCCATTCATCTTAAAATGTGGTAAAGCTTTAGATGAAAGAAAAACTGAAGTTA
GAATTCAATTCAAACGTCCAGATAACTTTTTATTCTCTGATGATGATATCTCAAGAAATG
AATTAGTTATGAGAATTCAACCAGGTGAAGCTGTTTACTTAAAATTATTATCAAAGAAAC
CAGGTTTAGAAAATAAAATTGAACAAACTGAATTAGATTTATCATATCGTCATAGATTTG
AAAATCTTGATTTACCAGATGCATATGAACGTTTAATTCTTGATTCAATTAAAGGTGATC
ATAACCTTTTCGTCAGAGATGATGAATTAGATGTTGCATGGCAAATATTTACACCATTAC
TCGATCAAATTGAAAAAGAAAAGATTAAACCTGAACCATATTCCTTTGGTTCACGTGGTC
CAAAATCTGCTGATGAATTATCAAAGAAATTTGGTTTCATTAGATCCTTAGGTTATAATT
GGCCAGGTAATTCTCCACAAGGTAGTAAAAAATAAATAAAGTTTTTTAAAAATGTCAAAA
AAAAAGACAAACAAGATTATCCAAATACCAGA
Length of connected seq. 1222
Full length Seq ID -
Full length Seq. -
Length of full length seq. -