>CHJ623 (CHJ623Q) /CSM/CH/CHJ6-A/CHJ623Q.Seq.d/
XXXXXXXXXXCATTGATTCAGTACTCGCTGAAAAAGTTGCCAAGAATCTTGGTGTAAAGA
TTGAACCAACTTCAACCAAACCAATCAAGAAGATTATGGTAAAACCATCACCAGCTTTAT
CTCAACCAAATTTATTATCTGGTGATATCGTTAGTCGTAGAATTTCAGTTATCATTGAAA
AAGGTGTTGACTATGATGACGTTATCAATTTCAAAGATGATATGGAGAAAAGAGGTGCAA
TGGTAATGTTAGTCTCTTCAACTTTGGCACAAGTAGAATGTAGTGGTGGTGAAATGTTAT
CTCCAAAAGGTACAATCATTGGTAACCCTTCCATTTTCTTTGATGCAGTCTATGTTCCAA
AATCAACAGAAGAAGCCACTAAAATCCTCTCTGATGATGGTAATTTCCTTCATTACATTC
TTGAAGCCTTTAAACATCTCAAAACCATTGCATTTGGTGGTTCTGTATCGGTGATTAAAG
AATTACTTCGTTTACCTCAAGATCATGGTTTATTACTTGGTAATGGTTATAAAGATATCA
CTGAA

---IDSVLAEKVAKNLGVKIEPTSTKPIKKIMVKPSPALSQPNLLSGDIVSRRISVIIEK
GVDYDDVINFKDDMEKRGAMVMLVSSTLAQVECSGGEMLSPKGTIIGNPSIFFDAVYVPK
STEEATKILSDDGNFLHYILEAFKHLKTIAFGGSVSVIKELLRLPQDHGLLLGNGYKDIT
E

Frame A:
---IDSVLAEKVAKNLGVKIEPTSTKPIKKIMVKPSPALSQPNLLSGDIVSRRISVIIEK
GVDYDDVINFKDDMEKRGAMVMLVSSTLAQVECSGGEMLSPKGTIIGNPSIFFDAVYVPK
STEEATKILSDDGNFLHYILEAFKHLKTIAFGGSVSVIKELLRLPQDHGLLLGNGYKDIT
E


Frame B:
---liqyslkklprilv*rlnqlqpnqsrrlw*nhhqlylnqiyylvislvvefqlslkk
vltmmtlsiskmiwrkevqw*c*slqlwhk*nvvvvkcylqkvqslvtlpfslmqsmfqn
qqkkplksslmmvisfitflkplniskplhlvvlyr*lknyfvylkimvyylvmvikisl


Frame C:
---*fstr*kscqeswckd*tnfnqtnqedygktitsfistkfiiw*yr*s*nfsyh*kr
c*l**ryqfqr*ygekrcngnvslfnfgtsrm*ww*nviskrynhw*pfhfl*cslcski
nrrsh*npl**w*fpslhs*sl*tsqnhciwwfcigd*ritsftsrswfitw*wl*ryh*

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SHG560 (SHG560Q) /CSM/SH/SHG5-C/SHG560Q.Seq.d/                       1061   0.0
SFK745 (SFK745Q) /CSM/SF/SFK7-B/SFK745Q.Seq.d/                       1061   0.0
SFI509 (SFI509Q) /CSM/SF/SFI5-A/SFI509Q.Seq.d/                       1061   0.0
SFG171 (SFG171Q) /CSM/SF/SFG1-C/SFG171Q.Seq.d/                       1061   0.0
SFG141 (SFG141Q) /CSM/SF/SFG1-B/SFG141Q.Seq.d/                       1061   0.0
SFF744 (SFF744Q) /CSM/SF/SFF7-B/SFF744Q.Seq.d/                       1061   0.0
SFD809 (SFD809Q) /CSM/SF/SFD8-A/SFD809Q.Seq.d/                       1061   0.0
SFD467 (SFD467Q) /CSM/SF/SFD4-C/SFD467Q.Seq.d/                       1061   0.0
SFA656 (SFA656Q) /CSM/SF/SFA6-C/SFA656Q.Seq.d/                       1061   0.0
CHR504 (CHR504Q) /CSM/CH/CHR5-A/CHR504Q.Seq.d/                       1061   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

AY386221|AY386221.1 Dictyostelium discoideum catalase B gene, complete cds.  1061   0.0    1
AF183177|AF183177.1 Dictyostelium discoideum catalase B (catB) mRNA, partial cds.  1061   0.0    1
AC152111|AC152111.1 Pichia stipitis clone JGIAHYZ-17L1, complete sequence.    50   0.040  3
AC099764|AC099764.1 Caenorhabditis briggsae cosmid CB030H15, complete sequence.    50   0.040  1
AR376004|AR376004.1 Sequence 1010 from patent US 6605709.          44   0.40   2
AF310889|AF310889.1 Dictyostelium discoideum RacD (racD) gene, complete cds; and unknown genes.    32   1.1    4
AC119673|AC119673.3 Homo sapiens chromosome 1 clone RP11-212H11, complete sequence.    38   1.5    5
CA245747|CA245747.1 SCEZFL5083E03.g Saccharum officinarum FL5 Saccharum officinarum cDNA clone SCEZFL5083E03 5', mRNA sequence.    34   1.6    2
AC116963|AC116963.2 Dictyostelium discoideum chromosome 2 map 4657875-4914984 strain AX4, complete sequence.    32   1.9    10
BX649269|BX649269.6 Zebrafish DNA sequence *** SEQUENCING IN PROGRESS *** from clone CH211-195G14.    38   2.1    3

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY386221_1(AY386221|pid:none) Dictyostelium discoideum catalase ...   348   6e-95
(Q55DH8) RecName: Full=Catalase-B;          EC=1.11.1.6;              348   6e-95
AF183177_1(AF183177|pid:none) Dictyostelium discoideum catalase ...   348   6e-95
(Q9I1W8) RecName: Full=Catalase HPII;          EC=1.11.1.6;  &AE...   135   5e-31
CP000438_2942(CP000438|pid:none) Pseudomonas aeruginosa UCBPP-PA...   135   5e-31
CP000075_280(CP000075|pid:none) Pseudomonas syringae pv. syringa...   129   5e-29
CP000680_2256(CP000680|pid:none) Pseudomonas mendocina ymp, comp...   129   6e-29
CP000076_74(CP000076|pid:none) Pseudomonas fluorescens Pf-5, com...   116   3e-25
CP000094_64(CP000094|pid:none) Pseudomonas fluorescens Pf0-1, co...   114   1e-24
CP000284_2371(CP000284|pid:none) Methylobacillus flagellatus KT,...    96   6e-19

 psg: 0.63  gvh: 0.39  alm: 0.42  top: 0.53  tms: 0.00  mit: 0.24  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.20  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 48.0 %: cytoplasmic
	 40.0 %: nuclear
	  8.0 %: mitochondrial
	  4.0 %: peroxisomal

>> prediction for CHJ623 is cyt

>CHJ623Z.Seq
NNNNNNNNNNCATTGATTCAGTACTCGCTGAAAAAGTTGCCAAGAATCTTGGTGTAAAGA
TTGAACCAACTTCAACCAAACCAATCAAGAAGATTATGGTAAAACCATCACCAGCTTTAT
CTCAACCAAATTTATTATCTGGTGATATCGTTAGTCGTAGAATTTCAGTTATCATTGAAA
AAGGTGTTGACTATGATGACGTTATCAATTTCAAAGATGATATGGAGAAAAGAGGTGCAA
TGGTAATGTTAGTCTCTTCAACTTTGGCACAAGTAGAATGTAGTGGTGGTGAAATGTTAT
CTCCAAAAGGTACAATCATTGGTAACCCTTCCATTTTCTTTGATGCAGTCTATGTTCCAA
AATCAACAGAAGAAGCCACTAAAATCCTCTCTGATGATGGTAATTTCCTTCATTACATTC
TTGAAGCCTTTAAACATCTCAAAACCATTGCATTTGGTGGTTCTGTATCGGTGATTAAAG
AATTACTTCGTTTACCTCAAGATCATGGTTTATTACTTGGTAATGGTTATAAAGATATCA
CTGAA