>CHN729 (CHN729Q) /CSM/CH/CHN7-B/CHN729Q.Seq.d/
ATATAGGTTTAAACTTTTTATTTATTTGTATAATAATAAAATCATAATAATCATAATAAT
AATTAATATAATATATCAATAATGACAGAGTTTGAAGCAATTGTCCATAAAGCTACAAAC
TCTAAAATTACAGCGCCAAAAAGAAAACATGTCAGATCAATTGTTTTAGAATGTTATAAT
GAAAATAGTGCAAGAACATTTTATATGGAATTATATAGAAGACCATTAGATACTAGTGAT
GTTGTTTGTTGGAAATCATTGATTACAATTCATAAGGTTGTACAAGAGGGACCAAAGAAT
GTATTAAGTGATACAATTAGTAGAGTTGGATGGTTTGAGAATTTGAGAGATCATTGGGCA
CGTTTTGATAATAGAGGATTTGGTAGATTGGTAGCAGACTATTGTACATTAATCATTGAT
AAAATACGTTTTCATCAAGCACATCCAGAATTTGATGGTGGATTATCCTTGGAGAACTAT
AGCAAGAATCATAGACCCGAGTCAATTGAAGTTGACAAAGGTTTACAAACTGTAAATCGT
TTAATGGATTTAACTGATGCTGXXXXXXXXXXTGGATGATGTTGCTGAACGTGAACTATT
GGCTGCCGCTAAAACCATTGAAGATGCTGCAAACTCATTATTGGCCGCAAAATCAAAGAG
AGCTCCAAAGAAGGAGGGTGATTCACCAGATGTTGCTGAGGCAATCCTTGAGGCTGCTAT
GGCAATCACTGGTGCTACTTCCACATTGGTTGGTGCCGCCACTTTAGCACAAAGAGAACG
TGTCGAAAAGGGTAGAACAAGTGATGGTGGTCCACTCTATAGAAAGGATCCAACTTGGGC
TGAAGGTTTAATCTCTGCTGCAAAATCTGTTGCCCAAGCCACTAAAGCTTTGGTAGATAA
TGCCAACAAGACAGCATCTGGTCAAGAGATCCCAGGTGGTACAGAAGAAGCTCTCATTGC
AACTTCGATGGCTGTAACTGCTGCAACTTCTCAATTGGTCTCTGCTTGTAAATCTAAATC
NTGATATCAATAGTCCTTCTCAACATAAACTTTCAAATGCTGCCAAATCCGTATCCAATG
CAACCAATCTTTTAGTGGCTGCAGCCAAAGCTGTCGCTGCTAAAGTCGCCTCTGAAGAGG
ATATCGATTTCGATAAACTCACTGTCACGGTTATAAAGTTAAAGAAATGGAACAACAAAT
GGCAATTCTCAGATTAGAAAAAGAATTAGAAGTCGCTAGAAAAGGTTTAAGGTATAGAAA
GAAACAATAGACGAAAA

i*v*tfylfv***nhnnhnnn*YNISIMTEFEAIVHKATNSKITAPKRKHVRSIVLECYN
ENSARTFYMELYRRPLDTSDVVCWKSLITIHKVVQEGPKNVLSDTISRVGWFENLRDHWA
RFDNRGFGRLVADYCTLIIDKIRFHQAHPEFDGGLSLENYSKNHRPESIEVDKGLQTVNR
LMDLTDA---

---DDVAERELLAAAKTIEDAANSLLAAKSKRAPKKEGDSPDVAEAILEAAMAITGATST
LVGAATLAQRERVEKGRTSDGGPLYRKDPTWAEGLISAAKSVAQATKALVDNANKTASGQ
EIPGGTEEALIATSMAVTAATSQLVSACKSKS*yq*sfst*tfkccqiriqcnqsfsgcs
qscrc*srl*rgyrfr*thchgykvkemeqqmailrlekelevarkglryrkkq*tk

Frame A:
i*v*tfylfv***nhnnhnnn*YNISIMTEFEAIVHKATNSKITAPKRKHVRSIVLECYN
ENSARTFYMELYRRPLDTSDVVCWKSLITIHKVVQEGPKNVLSDTISRVGWFENLRDHWA
RFDNRGFGRLVADYCTLIIDKIRFHQAHPEFDGGLSLENYSKNHRPESIEVDKGLQTVNR
LMDLTDA---

---wmmllnvnywlplkplkmlqthywpqnqrelqrrrvihqmllrqslrllwqslvllp
hwlvppl*hkenvskrveqvmvvhsieriqlglkv*sllqnllpkplklw*imptrqhlv
krsqvvqkklslqlrwl*llqllnwsllvnlnxdinspsqhklsnaaksvsnatnllvaa
akavaakvaseedidfdkltvtviklkkwnnkwqfsd*kkn*kslekv*giernnrrk

Frame B:
yrfklfiylynnkiiiiiiiiniiyq**qslkqlsiklqtlklqrqkenmsdqlf*nvim
kivqehfiwnyiedh*ilvmlfvgnh*lqfirlykrdqrmy*viqlveldglri*eiigh
vliiedlvdw*qtivh*slikyvfikhiqnlmvdypwrtiariidpsqlkltkvykl*iv
*wi*lml---

---g*cc*t*tigcr*nh*rcckliigrkikesskegg*ftrcc*gnp*gcygnhwcyfh
igwcrhfstkrtcrkg*nk*wwstl*kgsnlg*rfnlcckiccpsh*sfgr*cqqdsiws
rdprwyrrsshcnfdgcnccnfsiglcl*i*ixisivllninfqmlpnpypmqpif*wlq
pklsllksplkrisisinslsrl*s*rngttngnsqirkrirsr*krfkv*ketide

Frame C:
iglnflficiiiks**s***li*yinndrv*sncp*sykl*nysakkktcqincfrml**
k*cknilygii*ktiry**cclleiidyns*gctrgtkecik*yn**swmv*eferslgt
f***riw*igsrllyinh**ntfssstsri*wwiilgel*qes*trvn*s*qrftncksf
ngfn*c---

---DDVAERELLAAAKTIEDAANSLLAAKSKRAPKKEGDSPDVAEAILEAAMAITGATST
LVGAATLAQRERVEKGRTSDGGPLYRKDPTWAEGLISAAKSVAQATKALVDNANKTASGQ
EIPGGTEEALIATSMAVTAATSQLVSACKSKS*yq*sfst*tfkccqiriqcnqsfsgcs
qscrc*srl*rgyrfr*thchgykvkemeqqmailrlekelevarkglryrkkq*tk

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CHN729 (CHN729Q) /CSM/CH/CHN7-B/CHN729Q.Seq.d/                       2302   0.0
SHE349 (SHE349Q) /CSM/SH/SHE3-C/SHE349Q.Seq.d/                       1382   0.0
VFO311 (VFO311Q) /CSM/VF/VFO3-A/VFO311Q.Seq.d/                       1376   0.0
CHO795 (CHO795Q) /CSM/CH/CHO7-D/CHO795Q.Seq.d/                       1376   0.0
SHE309 (SHE309Q) /CSM/SH/SHE3-A/SHE309Q.Seq.d/                       1368   0.0
CHO481 (CHO481Q) /CSM/CH/CHO4-D/CHO481Q.Seq.d/                       1368   0.0
AHI510 (AHI510Q) /CSM/AH/AHI5-A/AHI510Q.Seq.d/                       1368   0.0
CHO450 (CHO450Q) /CSM/CH/CHO4-C/CHO450Q.Seq.d/                       1344   0.0
SHG374 (SHG374Q) /CSM/SH/SHG3-D/SHG374Q.Seq.d/                       1334   0.0
SHK510 (SHK510Q) /CSM/SH/SHK5-A/SHK510Q.Seq.d/                       1328   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

BA000026|BA000026.2 Mycoplasma penetrans HF-2 DNA, complete genome.    32   0.001  26
U14576|U14576.2 Dictyostelium discoideum filopodin (talA) gene, complete cds.    50   0.033  3
CR940353|CR940353.1 Theileria annulata genomic DNA chromosome 4.    38   0.25   18
AY379774|AY379774.1 Medicago truncatula chromosome 5 clone MtH1-015B03 strain Jemalong A17, WORKING DRAFT SEQUENCE, 27 unordered pieces.    38   0.99   7
AC158464|AC158464.2 Medicago truncatula chromosome 2 BAC clone mth2-145m24, complete sequence.    32   1.1    8
AC116979|AC116979.3 Dictyostelium discoideum chromosome 2 map 6445720-6776760 strain AX4, complete sequence.    34   1.3    13
AL845327|AL845327.5 Mouse DNA sequence from clone RP23-213J9 on chromosome X.    46   1.6    1
AC116957|AC116957.2 Dictyostelium discoideum chromosome 2 map 1685067-2090751 strain AX4, complete sequence.    32   2.0    12
CR891107|CR891107.1 Sus scrofa BES.                                34   2.1    3
AC009809|AC009809.4 Homo sapiens chromosome 3 clone RP11-246A10 map 3, WORKING DRAFT SEQUENCE, 9 unordered pieces.    40   2.2    7

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(Q54K81) RecName: Full=Talin-B;                                       125   4e-27
AB023655_1(AB023655|pid:none) Dictyostelium discoideum talB mRNA...   125   4e-27
(P54633) RecName: Full=Talin-A; AltName: Full=Filopodin;              118   5e-25
A57036(A57036)talin - slime mold (Dictyostelium discoideum)           118   5e-25
(Q9P6L5) RecName: Full=Endocytosis protein end4; AltName: Full=S...   108   4e-22
AE017345_306(AE017345|pid:none) Cryptococcus neoformans var. neo...   108   5e-22
AK017597_1(AK017597|pid:none) Mus musculus 8 days embryo whole b...   105   3e-21
(Q9Y4G6) RecName: Full=Talin-2;                                       105   3e-21
AF402000_1(AF402000|pid:none) Homo sapiens talin 2 mRNA, complet...   105   3e-21
BC079896_1(BC079896|pid:none) Mus musculus talin 2, mRNA (cDNA c...   105   3e-21

 psg: 0.75  gvh: 0.32  alm: 0.37  top: 0.53  tms: 0.00  mit: 0.20  mip: 0.00
 nuc: 0.11  erl: 0.00  erm: 0.40  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 44.0 %: cytoplasmic
	 44.0 %: nuclear
	  4.0 %: mitochondrial
	  4.0 %: vacuolar
	  4.0 %: peroxisomal

>> prediction for CHN729 is cyt

>CHN729F.Seq
ATATAGGTTTAAACTTTTTATTTATTTGTATAATAATAAAATCATAATAATCATAATAAT
AATTAATATAATATATCAATAATGACAGAGTTTGAAGCAATTGTCCATAAAGCTACAAAC
TCTAAAATTACAGCGCCAAAAAGAAAACATGTCAGATCAATTGTTTTAGAATGTTATAAT
GAAAATAGTGCAAGAACATTTTATATGGAATTATATAGAAGACCATTAGATACTAGTGAT
GTTGTTTGTTGGAAATCATTGATTACAATTCATAAGGTTGTACAAGAGGGACCAAAGAAT
GTATTAAGTGATACAATTAGTAGAGTTGGATGGTTTGAGAATTTGAGAGATCATTGGGCA
CGTTTTGATAATAGAGGATTTGGTAGATTGGTAGCAGACTATTGTACATTAATCATTGAT
AAAATACGTTTTCATCAAGCACATCCAGAATTTGATGGTGGATTATCCTTGGAGAACTAT
AGCAAGAATCATAGACCCGAGTCAATTGAAGTTGACAAAGGTTTACAAACTGTAAATCGT
TTAATGGATTTAACTGATGCTGNNNNNNNNNN

>CHN729Z.Seq
NNNNNNNNNNTGGATGATGTTGCTGAACGTGAACTATTGGCTGCCGCTAAAACCATTGAA
GATGCTGCAAACTCATTATTGGCCGCAAAATCAAAGAGAGCTCCAAAGAAGGAGGGTGAT
TCACCAGATGTTGCTGAGGCAATCCTTGAGGCTGCTATGGCAATCACTGGTGCTACTTCC
ACATTGGTTGGTGCCGCCACTTTAGCACAAAGAGAACGTGTCGAAAAGGGTAGAACAAGT
GATGGTGGTCCACTCTATAGAAAGGATCCAACTTGGGCTGAAGGTTTAATCTCTGCTGCA
AAATCTGTTGCCCAAGCCACTAAAGCTTTGGTAGATAATGCCAACAAGACAGCATCTGGT
CAAGAGATCCCAGGTGGTACAGAAGAAGCTCTCATTGCAACTTCGATGGCTGTAACTGCT
GCAACTTCTCAATTGGTCTCTGCTTGTAAATCTAAATCNTGATATCAATAGTCCTTCTCA
ACATAAACTTTCAAATGCTGCCAAATCCGTATCCAATGCAACCAATCTTTTAGTGGCTGC
AGCCAAAGCTGTCGCTGCTAAAGTCGCCTCTGAAGAGGATATCGATTTCGATAAACTCAC
TGTCACGGTTATAAAGTTAAAGAAATGGAACAACAAATGGCAATTCTCAGATTAGAAAAA
GAATTAGAAGTCGCTAGAAAAGGTTTAAGGTATAGAAAGAAACAATAGACGAAAA

>CHN729P.Seq
ATATAGGTTTAAACTTTTTATTTATTTGTATAATAATAAAATCATAATAATCATAATAAT
AATTAATATAATATATCAATAATGACAGAGTTTGAAGCAATTGTCCATAAAGCTACAAAC
TCTAAAATTACAGCGCCAAAAAGAAAACATGTCAGATCAATTGTTTTAGAATGTTATAAT
GAAAATAGTGCAAGAACATTTTATATGGAATTATATAGAAGACCATTAGATACTAGTGAT
GTTGTTTGTTGGAAATCATTGATTACAATTCATAAGGTTGTACAAGAGGGACCAAAGAAT
GTATTAAGTGATACAATTAGTAGAGTTGGATGGTTTGAGAATTTGAGAGATCATTGGGCA
CGTTTTGATAATAGAGGATTTGGTAGATTGGTAGCAGACTATTGTACATTAATCATTGAT
AAAATACGTTTTCATCAAGCACATCCAGAATTTGATGGTGGATTATCCTTGGAGAACTAT
AGCAAGAATCATAGACCCGAGTCAATTGAAGTTGACAAAGGTTTACAAACTGTAAATCGT
TTAATGGATTTAACTGATGCTG----------TGGATGATGTTGCTGAACGTGAACTATT
GGCTGCCGCTAAAACCATTGAAGATGCTGCAAACTCATTATTGGCCGCAAAATCAAAGAG
AGCTCCAAAGAAGGAGGGTGATTCACCAGATGTTGCTGAGGCAATCCTTGAGGCTGCTAT
GGCAATCACTGGTGCTACTTCCACATTGGTTGGTGCCGCCACTTTAGCACAAAGAGAACG
TGTCGAAAAGGGTAGAACAAGTGATGGTGGTCCACTCTATAGAAAGGATCCAACTTGGGC
TGAAGGTTTAATCTCTGCTGCAAAATCTGTTGCCCAAGCCACTAAAGCTTTGGTAGATAA
TGCCAACAAGACAGCATCTGGTCAAGAGATCCCAGGTGGTACAGAAGAAGCTCTCATTGC
AACTTCGATGGCTGTAACTGCTGCAACTTCTCAATTGGTCTCTGCTTGTAAATCTAAATC
NTGATATCAATAGTCCTTCTCAACATAAACTTTCAAATGCTGCCAAATCCGTATCCAATG
CAACCAATCTTTTAGTGGCTGCAGCCAAAGCTGTCGCTGCTAAAGTCGCCTCTGAAGAGG
ATATCGATTTCGATAAACTCACTGTCACGGTTATAAAGTTAAAGAAATGGAACAACAAAT
GGCAATTCTCAGATTAGAAAAAGAATTAGAAGTCGCTAGAAAAGGTTTAAGGTATAGAAA
GAAACAATAGACGAAAA