>CHS237 (CHS237Q) /CSM/CH/CHS2-B/CHS237Q.Seq.d/
ATAATACAACAAGCAGATAATAATAACAATACTACTAATGAAGAGAATGTTTATAATAAT
CAAGATTTAGGATTTCAAATTACTGATGATATGCCAATTAGGTTACGTCAAAGATTAAGA
CAGCACCAACAACAACAACAAAAACATTTAGATCAAATTAGATTACAAGAATTACAAGAA
CAATTAGCAGAGACCATCTCAAGAGATGATCAAGTTGGTCAAGCTATGATACAGGATCAA
ATAACAACATTACAACTACAAATCCAAAGAAATCAACAACCACAACAACAACCACAACAA
CCACAACAACAACAACAACAACAGCAACAACAACAACCGGTAGCAGCAGGAGGAGAACCA
ATTCAATTACAACCACAACAAAATCAAAGAGTATTCTTTAGAATACCAGGCGTGTTGGAA
ATGTTAAGACTTCAAGATGTACCAGAAGAACATGAAAATGATATCGAAAATGATCCANAC
CAAATCGATGATTTAGAACATTTTATCGGGTTATCAGGACCATTATTCAATATATTAACT
CATTGTTTCATTTTAATTGTTTATAATGCAATATTTTTATCAACATTTTTATATTTCCCA
TATTTAATTGGTCACACATTTATTGAAAAATTACCATXXXXXXXXXXTATTGTGATGCCA
CTTTTGACAGGATTTTTATTTGATTTCATATTTATGGTACCAATAATGGCGCCATATGAT
GAATCATTCTTCATTCATTTTGGTGATATATTCCAAAACTGGTGCTTAGGTGCATTACTA
TTAAAGTTTTGGTATAGATGGATCAATGCAACTAACCAAAATCCAGATAATAATAGAAAT
AATGTTATCGAAGATTTAGATCAACCAAGAGATAGATGGATTGATAGATTTAAGCAATTC
AAGAGAAATGGTATTTCAAATATTGATTTAAAATGGACATTTAGTAAAATTATTTTCCCA
ATTTGTCATTATCTCTTTACATTGTTAACAGTACCAATTTTCTTTTCCAAGTTTTTAGTA
CCATTATTTGGTGGAAGTTTAATTTTGGAGAGTATTTCCTTTAGATATGGTTTTGCAGTC
TACTGTTTCATTTTATTATTTGAAAAGATTTTACACAAGATTAAACAATGGTCATCACGT
TTCCACAATATGATAAGAGATGATAAATATTTAGTTGGTAAACAATTGCATAATATAGAT
CAACAACAACCATTAAAATTAGACGATAGTGGTAANGTAGTAACCAAACTATTTCTTAAG
AAAATAAATAAAAATAAAATAAAAATAAAAAT

IIQQADNNNNTTNEENVYNNQDLGFQITDDMPIRLRQRLRQHQQQQQKHLDQIRLQELQE
QLAETISRDDQVGQAMIQDQITTLQLQIQRNQQPQQQPQQPQQQQQQQQQQQPVAAGGEP
IQLQPQQNQRVFFRIPGVLEMLRLQDVPEEHENDIENDPXQIDDLEHFIGLSGPLFNILT
HCFILIVYNAIFLSTFLYFPYLIGHTFIEKLP---

---IVMPLLTGFLFDFIFMVPIMAPYDESFFIHFGDIFQNWCLGALLLKFWYRWINATNQ
NPDNNRNNVIEDLDQPRDRWIDRFKQFKRNGISNIDLKWTFSKIIFPICHYLFTLLTVPI
FFSKFLVPLFGGSLILESISFRYGFAVYCFILLFEKILHKIKQWSSRFHNMIRDDKYLVG
KQLHNIDQQQPLKLDDSGXVVTKLFLKKINKNKIKIK

Frame A:
IIQQADNNNNTTNEENVYNNQDLGFQITDDMPIRLRQRLRQHQQQQQKHLDQIRLQELQE
QLAETISRDDQVGQAMIQDQITTLQLQIQRNQQPQQQPQQPQQQQQQQQQQQPVAAGGEP
IQLQPQQNQRVFFRIPGVLEMLRLQDVPEEHENDIENDPXQIDDLEHFIGLSGPLFNILT
HCFILIVYNAIFLSTFLYFPYLIGHTFIEKLP---

---ycdatfdrifi*fhiygtnngai**iilhsfw*yipklvlrcitikvlv*mdqcn*p
ksr***k*cyrrfrstkr*md**i*aiqekwyfky*fkmdi**nyfpnlslslyivnstn
flfqvfstiiwwkfnfgeyfl*iwfcsllfhfii*kdftqd*tmvitfpqydkr**ifsw
*tia*yrstttikirr*w*xsnqtis*enk*k*nknkn

Frame B:
*ynkqiiitillmkrmfiiiki*dfkllmicqlgyvkd*dstnnnnkni*ikldyknykn
n*qrpsqemiklvkl*yrik*qhynykskeinnhnnnhnnhnnnnnnsnnnnr*qqeenq
fnynhnkikeysleyqacwkc*dfkmyqknmkmiskmixtksmi*nilsgyqdhysiy*l
ivsf*lfimqyfyqhfyishi*lvthllknyh---

---IVMPLLTGFLFDFIFMVPIMAPYDESFFIHFGDIFQNWCLGALLLKFWYRWINATNQ
NPDNNRNNVIEDLDQPRDRWIDRFKQFKRNGISNIDLKWTFSKIIFPICHYLFTLLTVPI
FFSKFLVPLFGGSLILESISFRYGFAVYCFILLFEKILHKIKQWSSRFHNMIRDDKYLVG
KQLHNIDQQQPLKLDDSGXVVTKLFLKKINKNKIKIK

Frame C:
nttsr***qyy**recl**srfrisny**yan*vtskiktapttttktfrsn*itritrt
isrdhlkr*sswssydtgsnnnitttnpkksttttttttttttttttattttgssrrrtn
sittttksksil*ntrrvgnvktsrctrrt*k*yrk*sxpnr*frtfyrvirtiiqyins
lfhfncl*cnifinififpifnwshiy*kit---

---l*chf*qdfylisylwyq*wrhmmnhssfilviysktga*vhyy*sfgidgsmqltk
iqiiieimlski*inqeidglidlsnsremvfqili*nghlvklfsqfviislhc*qyqf
sfpsf*yhylvev*fwrvfpldmvlqstvsfyylkrfytrlnnghhvsti**emini*lv
nncii*innnh*n*tivvx**pnyflrk*ikik*k*k

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CHS237 (CHS237Q) /CSM/CH/CHS2-B/CHS237Q.Seq.d/                       1231   0.0
SHD835 (SHD835Q) /CSM/SH/SHD8-B/SHD835Q.Seq.d/                       1195   0.0
SHC513 (SHC513Q) /CSM/SH/SHC5-A/SHC513Q.Seq.d/                       1195   0.0
CHO285 (CHO285Q) /CSM/CH/CHO2-D/CHO285Q.Seq.d/                       1195   0.0
CHI616 (CHI616Q) /CSM/CH/CHI6-A/CHI616Q.Seq.d/                       1195   0.0
CHF647 (CHF647Q) /CSM/CH/CHF6-B/CHF647Q.Seq.d/                       1195   0.0
AHQ485 (AHQ485Q) /CSM/AH/AHQ4-D/AHQ485Q.Seq.d/                       1195   0.0
AHM196 (AHM196Q) /CSM/AH/AHM1-D/AHM196Q.Seq.d/                       1195   0.0
AHL378 (AHL378Q) /CSM/AH/AHL3-D/AHL378Q.Seq.d/                       1195   0.0
AHF102 (AHF102Q) /CSM/AH/AHF1-A/AHF102Q.Seq.d/                       1195   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

AC116957|AC116957.2 Dictyostelium discoideum chromosome 2 map 1685067-2090751 strain AX4, complete sequence.    48   1e-07  6
AR552906|AR552906.1 Sequence 8037 from patent US 6747137.          38   2e-05  3
AC117081|AC117081.2 Dictyostelium discoideum chromosome 2 map 5862124-6045772 strain AX4, complete sequence.    38   9e-05  10
AC116979|AC116979.3 Dictyostelium discoideum chromosome 2 map 6445720-6776760 strain AX4, complete sequence.    44   0.003  6
AC116963|AC116963.2 Dictyostelium discoideum chromosome 2 map 4657875-4914984 strain AX4, complete sequence.    40   0.003  11
AC116305|AC116305.2 Dictyostelium discoideum chromosome 2 map 1005175-1418323 strain AX4, complete sequence.    40   0.004  8
BX511198|BX511198.8 Mouse DNA sequence from clone RP23-390P10 on chromosome 4.    42   0.005  9
CR848753|CR848753.10 Zebrafish DNA sequence *** SEQUENCING IN PROGRESS *** from clone  DKEY-46J3.    54   0.007  1
CR848054|CR848054.2 Zebrafish DNA sequence *** SEQUENCING IN PROGRESS *** from clone.    54   0.007  1
AC079792|AC079792.3 Homo sapiens chromosome 7 clone RP11-569I13, WORKING DRAFT SEQUENCE, 6 unordered pieces.    46   0.010  4

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM468150_5(AM468150|pid:none) Vitis vinifera contig VV78X086105....   103   1e-20
AP003571_2(AP003571|pid:none) Oryza sativa Japonica Group genomi...   100   8e-20
AP008212_1632(AP008212|pid:none) Oryza sativa (japonica cultivar...   100   8e-20
AC148528_3(AC148528|pid:none) Medicago truncatula clone mth2-53h...   100   1e-19
AM458214_2(AM458214|pid:none) Vitis vinifera contig VV78X073587....    96   3e-18
AP008214_2(AP008214|pid:none) Oryza sativa (japonica cultivar-gr...    86   3e-15
BT053607_1(BT053607|pid:none) Medicago truncatula clone MTYFT1G-...    82   3e-14
BC119893_1(BC119893|pid:none) Bos taurus membrane-associated rin...    72   5e-11
CQ834306_1(CQ834306|pid:none) Sequence 177 from Patent WO2004058...    71   9e-11
BC046148_1(BC046148|pid:none) Homo sapiens membrane-associated r...    71   9e-11

 psg: 0.75  gvh: 0.26  alm: 0.26  top: 0.50  tms: 0.33  mit: 0.22  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.40  pox: 0.00  px2: 0.50  vac: 0.33  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 1.00  m3b: 0.00  m_ : 0.00 

	 44.0 %: plasma membrane
	 28.0 %: endoplasmic reticulum
	  8.0 %: mitochondrial
	  4.0 %: cytoskeletal
	  4.0 %: Golgi
	  4.0 %: nuclear
	  4.0 %: vacuolar
	  4.0 %: cytoplasmic

>> prediction for CHS237 is pla

>CHS237F.Seq
ATAATACAACAAGCAGATAATAATAACAATACTACTAATGAAGAGAATGTTTATAATAAT
CAAGATTTAGGATTTCAAATTACTGATGATATGCCAATTAGGTTACGTCAAAGATTAAGA
CAGCACCAACAACAACAACAAAAACATTTAGATCAAATTAGATTACAAGAATTACAAGAA
CAATTAGCAGAGACCATCTCAAGAGATGATCAAGTTGGTCAAGCTATGATACAGGATCAA
ATAACAACATTACAACTACAAATCCAAAGAAATCAACAACCACAACAACAACCACAACAA
CCACAACAACAACAACAACAACAGCAACAACAACAACCGGTAGCAGCAGGAGGAGAACCA
ATTCAATTACAACCACAACAAAATCAAAGAGTATTCTTTAGAATACCAGGCGTGTTGGAA
ATGTTAAGACTTCAAGATGTACCAGAAGAACATGAAAATGATATCGAAAATGATCCANAC
CAAATCGATGATTTAGAACATTTTATCGGGTTATCAGGACCATTATTCAATATATTAACT
CATTGTTTCATTTTAATTGTTTATAATGCAATATTTTTATCAACATTTTTATATTTCCCA
TATTTAATTGGTCACACATTTATTGAAAAATTACCATNNNNNNNNNN

>CHS237Z.Seq
NNNNNNNNNNTATTGTGATGCCACTTTTGACAGGATTTTTATTTGATTTCATATTTATGG
TACCAATAATGGCGCCATATGATGAATCATTCTTCATTCATTTTGGTGATATATTCCAAA
ACTGGTGCTTAGGTGCATTACTATTAAAGTTTTGGTATAGATGGATCAATGCAACTAACC
AAAATCCAGATAATAATAGAAATAATGTTATCGAAGATTTAGATCAACCAAGAGATAGAT
GGATTGATAGATTTAAGCAATTCAAGAGAAATGGTATTTCAAATATTGATTTAAAATGGA
CATTTAGTAAAATTATTTTCCCAATTTGTCATTATCTCTTTACATTGTTAACAGTACCAA
TTTTCTTTTCCAAGTTTTTAGTACCATTATTTGGTGGAAGTTTAATTTTGGAGAGTATTT
CCTTTAGATATGGTTTTGCAGTCTACTGTTTCATTTTATTATTTGAAAAGATTTTACACA
AGATTAAACAATGGTCATCACGTTTCCACAATATGATAAGAGATGATAAATATTTAGTTG
GTAAACAATTGCATAATATAGATCAACAACAACCATTAAAATTAGACGATAGTGGTAANG
TAGTAACCAAACTATTTCTTAAGAAAATAAATAAAAATAAAATAAAAATAAAAAT

>CHS237P.Seq
ATAATACAACAAGCAGATAATAATAACAATACTACTAATGAAGAGAATGTTTATAATAAT
CAAGATTTAGGATTTCAAATTACTGATGATATGCCAATTAGGTTACGTCAAAGATTAAGA
CAGCACCAACAACAACAACAAAAACATTTAGATCAAATTAGATTACAAGAATTACAAGAA
CAATTAGCAGAGACCATCTCAAGAGATGATCAAGTTGGTCAAGCTATGATACAGGATCAA
ATAACAACATTACAACTACAAATCCAAAGAAATCAACAACCACAACAACAACCACAACAA
CCACAACAACAACAACAACAACAGCAACAACAACAACCGGTAGCAGCAGGAGGAGAACCA
ATTCAATTACAACCACAACAAAATCAAAGAGTATTCTTTAGAATACCAGGCGTGTTGGAA
ATGTTAAGACTTCAAGATGTACCAGAAGAACATGAAAATGATATCGAAAATGATCCANAC
CAAATCGATGATTTAGAACATTTTATCGGGTTATCAGGACCATTATTCAATATATTAACT
CATTGTTTCATTTTAATTGTTTATAATGCAATATTTTTATCAACATTTTTATATTTCCCA
TATTTAATTGGTCACACATTTATTGAAAAATTACCAT----------TATTGTGATGCCA
CTTTTGACAGGATTTTTATTTGATTTCATATTTATGGTACCAATAATGGCGCCATATGAT
GAATCATTCTTCATTCATTTTGGTGATATATTCCAAAACTGGTGCTTAGGTGCATTACTA
TTAAAGTTTTGGTATAGATGGATCAATGCAACTAACCAAAATCCAGATAATAATAGAAAT
AATGTTATCGAAGATTTAGATCAACCAAGAGATAGATGGATTGATAGATTTAAGCAATTC
AAGAGAAATGGTATTTCAAATATTGATTTAAAATGGACATTTAGTAAAATTATTTTCCCA
ATTTGTCATTATCTCTTTACATTGTTAACAGTACCAATTTTCTTTTCCAAGTTTTTAGTA
CCATTATTTGGTGGAAGTTTAATTTTGGAGAGTATTTCCTTTAGATATGGTTTTGCAGTC
TACTGTTTCATTTTATTATTTGAAAAGATTTTACACAAGATTAAACAATGGTCATCACGT
TTCCACAATATGATAAGAGATGATAAATATTTAGTTGGTAAACAATTGCATAATATAGAT
CAACAACAACCATTAAAATTAGACGATAGTGGTAANGTAGTAACCAAACTATTTCTTAAG
AAAATAAATAAAAATAAAATAAAAATAAAAAT