>SFC734 (SFC734Q) /CSM/SF/SFC7-B/SFC734Q.Seq.d/
ATTGTCATAATAATATTATAAAATTCAAAGATGTCTAAAGTAGTCCGTAGTAGTAAATAT
CGTCATGTTTTTGCAGCACAACCAAAAAAAGAAGAGTGCTATCAAAACTTAAAAGTTACC
AAATCAGCATGGGATAGTAATTACGTTGCAGCCAACACTAGATACTTTGGTGTTATTTGG
GATGCTGCAGGTGGTGGTTCATTCGCTGTTATTCCACATGAGGCTTCAGGTAAAACCACA
TCAGTTCCATTATTCAATGGTCATAAGAGTGCAGTTTTAGATATTGCTTTCCACCCATTC
AATGAAAACCTCGTTGGTTCAGTTTCTGAAGATTGTAACATTTGTATTTGGGGTATCCCA
GAAGGTGGTTTAACCGACTCAATCTCAACCCCACTCCAAACTTTATCTGGTCACAAGAGA
AAGGTTGGTACCATCTCATTCAATCCAGTTGCTGATAATGTTGCCGTTACCTCATCTGGT
GATTTCTTAGTXXXXXXXXXXAAGAGAACTCCACATTTATGATCCACGTGCTTTCACCAC
CCCCACTCTCTGCTCAAGTCGTCGATTCTGCCTCTGGTCTCTTAATGCCATTCTATGATG
CTGACAATTCAATTTTATACCTTGCTGGTAAAGGTGATGGTAACATCAGATACTACGAAT
TGGTCGATGAATCACCATACATTCATTTCTTAAGTGAATTCAAATCTGCCACCCCACAAA
GAGGTCTTTGCTTCTTACCAAAGAGATGTCTCAACACCTCTGAATGTGAAATCGCTAGAG
GTCTCAAAGTTACTCCATTCACCGTTGAACCAATCTCATTCCGTGTACCAAGAAAATCTG
ATATCTTCCAAGACGATATCTACCCAGATACCTACGCTGGTGAACCATCACTCACTGCCG
AACAATGGGTTTCAGGTACCAATGCTGAACCAAAGACTGTTAGTTTAGCTGGTGGTTTTG
TCAAAAAAGCTTCAGCTGTTGAATTCAAACCAGTCGTTCAAGTTCAAGAAGGTCCAAAGA
ATNAAAAAGAACTCCGTGAAGAATACGAAAAATTAAAGATTCGTGTTGCTACTTAGAATC
TNAAATCGTAAAAAGGATGCCAAAATCAAAGAACTCACCAACTAA

iviiil*NSKMSKVVRSSKYRHVFAAQPKKEECYQNLKVTKSAWDSNYVAANTRYFGVIW
DAAGGGSFAVIPHEASGKTTSVPLFNGHKSAVLDIAFHPFNENLVGSVSEDCNICIWGIP
EGGLTDSISTPLQTLSGHKRKVGTISFNPVADNVAVTSSGDFL---

---ENSTFMIHVLSPPPLSAQVVDSASGLLMPFYDADNSILYLAGKGDGNIRYYELVDES
PYIHFLSEFKSATPQRGLCFLPKRCLNTSECEIARGLKVTPFTVEPISFRVPRKSDIFQD
DIYPDTYAGEPSLTAEQWVSGTNAEPKTVSLAGGFVKKASAVEFKPVVQVQEGPKNXKEL
REEYEKLKIRVAT*nlks*kgcqnqrthql

Frame A:
iviiil*NSKMSKVVRSSKYRHVFAAQPKKEECYQNLKVTKSAWDSNYVAANTRYFGVIW
DAAGGGSFAVIPHEASGKTTSVPLFNGHKSAVLDIAFHPFNENLVGSVSEDCNICIWGIP
EGGLTDSISTPLQTLSGHKRKVGTISFNPVADNVAVTSSGDFL---

---krtphl*stcfhhphsllkssilplvs*chsmmltiqfytllvkvmvtsdttnwsmn
hhtfis*vnsnlpphkevfasyqrdvstplnvkslevskllhsplnqshsvyqenlissk
tistqiptlvnhhslpnngfqvpmlnqrllv*lvvlskklqllnsnqsfkfkkvqrxkkn
svkntkn*rfvlllrixnrkkdakikeltn*

Frame B:
ls**yykiqrclk*svvvnivmflqhnqkkksaikt*klpnqhgivitlqptldtlvlfg
mlqvvvhsllfhmrlqvkphqfhysmvirvqf*illsthsmktslvqflkivtfvfgvsq
kvv*ptqsqphsklylvtrerlvpshsiqllimlplphlvis*---

---relhiydprafttptlcssrrfclwslnail*c*qfnfipcw*r*w*hqilrigr*i
tihsflk*iqichptkrsllltkemsqhl*m*nr*rsqsysihr*tnlipctkki*ylpr
rylprylrw*tithcrtmgfryqc*tkdc*fswwfcqksfsc*iqtsrsssrrskexkrt
p*rirkikdsccylesxivkrmpksknspt

Frame C:
chnniikfkdv*ssp***isscfcsttkkrrvlsklksyqismg**lrcsqh*ilwcylg
ccrwwfircyst*gfr*nhissiiqws*ecsfrycfppiq*kprwfsf*rl*hlylgypr
rwfnrlnlnptpnfiwsqekgwyhliqssc**ccryliw*fls---

---ENSTFMIHVLSPPPLSAQVVDSASGLLMPFYDADNSILYLAGKGDGNIRYYELVDES
PYIHFLSEFKSATPQRGLCFLPKRCLNTSECEIARGLKVTPFTVEPISFRVPRKSDIFQD
DIYPDTYAGEPSLTAEQWVSGTNAEPKTVSLAGGFVKKASAVEFKPVVQVQEGPKNXKEL
REEYEKLKIRVAT*nlks*kgcqnqrthql

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SFC734 (SFC734Q) /CSM/SF/SFC7-B/SFC734Q.Seq.d/                       2117   0.0
AFD733 (AFD733Q) /CSM/AF/AFD7-B/AFD733Q.Seq.d/                       1225   0.0
AFL114 (AFL114Q) /CSM/AF/AFL1-A/AFL114Q.Seq.d/                       1211   0.0
VFM855 (VFM855Q) /CSM/VF/VFM8-C/VFM855Q.Seq.d/                       1197   0.0
VFL504 (VFL504Q) /CSM/VF/VFL5-A/VFL504Q.Seq.d/                       1197   0.0
VFL210 (VFL210Q) /CSM/VF/VFL2-A/VFL210Q.Seq.d/                       1197   0.0
VFK602 (VFK602Q) /CSM/VF/VFK6-A/VFK602Q.Seq.d/                       1197   0.0
VFH766 (VFH766Q) /CSM/VF/VFH7-C/VFH766Q.Seq.d/                       1197   0.0
VFE295 (VFE295Q) /CSM/VF/VFE2-D/VFE295Q.Seq.d/                       1197   0.0
SFK894 (SFK894Q) /CSM/SF/SFK8-D/SFK894Q.Seq.d/                       1197   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

X61480|X61480.1 D.discoideum mRNA for coronin.                   1037   0.0    4
CB928919|CB928919.1 ABA1_38_B07.b1_A012 Abscisic acid-treated seedlings Sorghum bicolor cDNA clone ABA1_38_B07_A012 3', mRNA sequence.    68   8e-11  3
CD210549|CD210549.1 HS1_48_H10.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone HS1_48_H10_A012 3', mRNA sequence.    68   1e-10  3
CD235972|CD235972.1 SS1_25_F03.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA clone SS1_25_F03_A012 3', mRNA sequence.    64   1e-08  3
AV803042|AV803042.1 Arabidopsis thaliana cDNA clone:RAFL09-34-C08, 3'-end.    52   2e-05  2
AL428709|AL428709.1 clone BA0AB027D02 of library BA0AB from strain CLIB 210 of  Kluyveromyces lactis.    40   3e-04  2
CF185608|CF185608.1 j2h09j2.r1 Cryptococcus neoformans strain B3501 Cryptococcus neoformans var. neoformans cDNA clone j2h09j2 5', mRNA sequence.    54   8e-04  2
BH162152|BH162152.1 ENTTF04TR Entamoeba histolytica Sheared DNA Entamoeba histolytica genomic, DNA sequence.    56   0.001  1
AX830558|AX830558.1 Sequence 1278 from Patent WO03072602.          40   0.60   2
AX819528|AX819528.1 Sequence 1278 from Patent EP1338608.           40   0.60   2

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S18663(S18663) coronin - slime mold (Dictyostelium discoideum)  ...   322   2e-87
AY525781_1(AY525781|pid:none) Acanthamoeba healyi coronin mRNA, ...   171   3e-41
(Q6QEF8) RecName: Full=Coronin-6;                                     169   1e-40
AF447884_1(AF447884|pid:none) Homo sapiens PP1782 mRNA, complete...   169   1e-40
AF447885_1(AF447885|pid:none) Homo sapiens PP1881 mRNA, complete...   169   1e-40
AF140359_1(AF140359|pid:none) Rattus norvegicus coronin relative...   169   2e-40
(Q920J3) RecName: Full=Coronin-6;  &BC098656_1(BC098656|pid:none)     169   2e-40
AK096431_1(AK096431|pid:none) Homo sapiens cDNA FLJ39112 fis, cl...   169   2e-40
AB070895_1(AB070895|pid:none) Mus musculus Coro6 mRNA for coroni...   167   5e-40
BC141247_1(BC141247|pid:none) Mus musculus coronin 6, mRNA (cDNA...   167   5e-40

 psg: 0.58  gvh: 0.32  alm: 0.42  top: 0.53  tms: 0.00  mit: 0.42  mip: 0.04
 nuc: 0.02  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 40.0 %: mitochondrial
	 36.0 %: nuclear
	 16.0 %: cytoplasmic
	  8.0 %: cytoskeletal

>> prediction for SFC734 is mit

>SFC734F.Seq
ATTGTCATAATAATATTATAAAATTCAAAGATGTCTAAAGTAGTCCGTAGTAGTAAATAT
CGTCATGTTTTTGCAGCACAACCAAAAAAAGAAGAGTGCTATCAAAACTTAAAAGTTACC
AAATCAGCATGGGATAGTAATTACGTTGCAGCCAACACTAGATACTTTGGTGTTATTTGG
GATGCTGCAGGTGGTGGTTCATTCGCTGTTATTCCACATGAGGCTTCAGGTAAAACCACA
TCAGTTCCATTATTCAATGGTCATAAGAGTGCAGTTTTAGATATTGCTTTCCACCCATTC
AATGAAAACCTCGTTGGTTCAGTTTCTGAAGATTGTAACATTTGTATTTGGGGTATCCCA
GAAGGTGGTTTAACCGACTCAATCTCAACCCCACTCCAAACTTTATCTGGTCACAAGAGA
AAGGTTGGTACCATCTCATTCAATCCAGTTGCTGATAATGTTGCCGTTACCTCATCTGGT
GATTTCTTAGT----------

>SFC734Z.Seq
----------AAGAGAACTCCACATTTATGATCCACGTGCTTTCACCACCCCCACTCTCT
GCTCAAGTCGTCGATTCTGCCTCTGGTCTCTTAATGCCATTCTATGATGCTGACAATTCA
ATTTTATACCTTGCTGGTAAAGGTGATGGTAACATCAGATACTACGAATTGGTCGATGAA
TCACCATACATTCATTTCTTAAGTGAATTCAAATCTGCCACCCCACAAAGAGGTCTTTGC
TTCTTACCAAAGAGATGTCTCAACACCTCTGAATGTGAAATCGCTAGAGGTCTCAAAGTT
ACTCCATTCACCGTTGAACCAATCTCATTCCGTGTACCAAGAAAATCTGATATCTTCCAA
GACGATATCTACCCAGATACCTACGCTGGTGAACCATCACTCACTGCCGAACAATGGGTT
TCAGGTACCAATGCTGAACCAAAGACTGTTAGTTTAGCTGGTGGTTTTGTCAAAAAAGCT
TCAGCTGTTGAATTCAAACCAGTCGTTCAAGTTCAAGAAGGTCCAAAGAATNAAAAAGAA
CTCCGTGAAGAATACGAAAAATTAAAGATTCGTGTTGCTACTTAGAATCTNAAATCGTAA
AAAGGATGCCAAAATCAAAGAACTCACCAACTAA

>SFC734P.Seq
ATTGTCATAATAATATTATAAAATTCAAAGATGTCTAAAGTAGTCCGTAGTAGTAAATAT
CGTCATGTTTTTGCAGCACAACCAAAAAAAGAAGAGTGCTATCAAAACTTAAAAGTTACC
AAATCAGCATGGGATAGTAATTACGTTGCAGCCAACACTAGATACTTTGGTGTTATTTGG
GATGCTGCAGGTGGTGGTTCATTCGCTGTTATTCCACATGAGGCTTCAGGTAAAACCACA
TCAGTTCCATTATTCAATGGTCATAAGAGTGCAGTTTTAGATATTGCTTTCCACCCATTC
AATGAAAACCTCGTTGGTTCAGTTTCTGAAGATTGTAACATTTGTATTTGGGGTATCCCA
GAAGGTGGTTTAACCGACTCAATCTCAACCCCACTCCAAACTTTATCTGGTCACAAGAGA
AAGGTTGGTACCATCTCATTCAATCCAGTTGCTGATAATGTTGCCGTTACCTCATCTGGT
GATTTCTTAGT----------AAGAGAACTCCACATTTATGATCCACGTGCTTTCACCAC
CCCCACTCTCTGCTCAAGTCGTCGATTCTGCCTCTGGTCTCTTAATGCCATTCTATGATG
CTGACAATTCAATTTTATACCTTGCTGGTAAAGGTGATGGTAACATCAGATACTACGAAT
TGGTCGATGAATCACCATACATTCATTTCTTAAGTGAATTCAAATCTGCCACCCCACAAA
GAGGTCTTTGCTTCTTACCAAAGAGATGTCTCAACACCTCTGAATGTGAAATCGCTAGAG
GTCTCAAAGTTACTCCATTCACCGTTGAACCAATCTCATTCCGTGTACCAAGAAAATCTG
ATATCTTCCAAGACGATATCTACCCAGATACCTACGCTGGTGAACCATCACTCACTGCCG
AACAATGGGTTTCAGGTACCAATGCTGAACCAAAGACTGTTAGTTTAGCTGGTGGTTTTG
TCAAAAAAGCTTCAGCTGTTGAATTCAAACCAGTCGTTCAAGTTCAAGAAGGTCCAAAGA
ATNAAAAAGAACTCCGTGAAGAATACGAAAAATTAAAGATTCGTGTTGCTACTTAGAATC
TNAAATCGTAAAAAGGATGCCAAAATCAAAGAACTCACCAACTAA