>SFK237 (SFK237Q) /CSM/SF/SFK2-B/SFK237Q.Seq.d/
AATTTTATAGAGCCACAATTATTAACACACTCAAATGAAAAAGAAAATAAAAAATACAAA
TAAAAAAATAGTTAAAAAGAAGCCACAACCTGTAAATAATAATAGTAATAAAAATAAAAA
ACCCATATCAATTAATAATAAGATAAATAAAGAAGTTGTTAAAATAGAAAATAAATCTGA
AAAAGGAGATGATTTTTTATATGTTGGTGAATTTATAAATAATGAAAAAAATGGTAAAGG
TATAATTTATTATGAGGATGGGACATTAATTGAAGGTAATTGGAAAGATGGTGAATTAAA
TGGGCAAGGTATATTTAAAACAACGGAATTAATAATTAGTGGAGAATTTATTGATGGTGA
ATTAAGTGGACAAGTTGAAGAGATTGATAAAGAAACTGGCAAACTAGTATTTAAAGGTGA
ATATTCTCAAGGTCAAAGACATGGTCGTGGTAAATTAATAATGATTGAAGATGGTGGAGA
ACTTACAGGCACATGGGTCGATGGTAAAATGACAGGATACGCAGAATACACATTCCCAAC
ATGTAATGGTAGATTTAAAATCCAAGGTCAATGGTTGAATGGAGATTTXXXXXXXXXX

il*shny*HTQMKKKIKNTNKKIVKKKPQPVNNNSNKNKKPISINNKINKEVVKIENKSE
KGDDFLYVGEFINNEKNGKGIIYYEDGTLIEGNWKDGELNGQGIFKTTELIISGEFIDGE
LSGQVEEIDKETGKLVFKGEYSQGQRHGRGKLIMIEDGGELTGTWVDGKMTGYAEYTFPT
CNGRFKIQGQWLNGD---

Frame A:
nfiepqllthsnekenkkyk*kns*keattck*****k*kthin***dk*rsc*nrk*i*
krr*fficw*iyk**kkw*rynll*gwdin*r*lerw*ikwaryi*nnginn*wriy*w*
ikwts*rd**rnwqtsi*r*ifsrsktwsw*innd*rwwrtyrhmgrw*ndrirrihipn
m*w*i*nprsmvewr---


Frame B:
il*shny*HTQMKKKIKNTNKKIVKKKPQPVNNNSNKNKKPISINNKINKEVVKIENKSE
KGDDFLYVGEFINNEKNGKGIIYYEDGTLIEGNWKDGELNGQGIFKTTELIISGEFIDGE
LSGQVEEIDKETGKLVFKGEYSQGQRHGRGKLIMIEDGGELTGTWVDGKMTGYAEYTFPT
CNGRFKIQGQWLNGD---


Frame C:
fyratiintlk*krk*kiqikk*lkrshnl*iiivikiknpyqliir*ikkllk*kinlk
kemifymlvnl*imkkmvkv*fimrmgh*lkvigkmvn*mgkvylkqrn**lvenllmvn
*vdklkrlikklan*ylkvnilkvkdmvvvn***lkmvenlqahgsmvk*qdtqnthsqh
vmvdlkskvng*mei---

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SFK237 (SFK237Q) /CSM/SF/SFK2-B/SFK237Q.Seq.d/                        759   0.0
CFJ346 (CFJ346Q) /CSM/CF/CFJ3-B/CFJ346Q.Seq.d/                        759   0.0
VFF148 (VFF148Q) /CSM/VF/VFF1-B/VFF148Q.Seq.d/                        745   0.0
SSI546 (SSI546Q) /CSM/SS/SSI5-B/SSI546Q.Seq.d/                         38   0.15
AHM108 (AHM108Q) /CSM/AH/AHM1-A/AHM108Q.Seq.d/                         38   0.15
VSK395 (VSK395Q) /CSM/VS/VSK3-D/VSK395Q.Seq.d/                         36   0.59
VHI214 (VHI214Q) /CSM/VH/VHI2-A/VHI214Q.Seq.d/                         36   0.59
SHL116 (SHL116Q) /CSM/SH/SHL1-A/SHL116Q.Seq.d/                         36   0.59
AHK227 (AHK227Q) /CSM/AH/AHK2-B/AHK227Q.Seq.d/                         36   0.59
VHJ294 (VHJ294Q) /CSM/VH/VHJ2-D/VHJ294Q.Seq.d/                         34   2.3

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(BJ390161) Dictyostelium discoideum cDNA clone:dds21i10, 5' ...   708   0.0    3
(BJ361937) Dictyostelium discoideum cDNA clone:ddc19l11, 5' ...   708   0.0    3
(BJ410159) Dictyostelium discoideum cDNA clone:ddv11o11, 5' ...   708   0.0    2
(BJ428306) Dictyostelium discoideum cDNA clone:ddv11o11, 3' ...   165   1e-44  2
(BJ375629) Dictyostelium discoideum cDNA clone:ddc19l11, 3' ...   161   4e-35  1
(DJ357739) METHODS AND NUCLEIC ACIDS FOR THE ANALYSIS OF GEN...    46   1.4    1
(CS502700) Sequence 700 from Patent WO2007009755.                  46   1.4    1
(CS250652) Sequence 196 from Patent WO2005123945.                  46   1.4    1
(CS113458) Sequence 216 from Patent WO2005054517.                  46   1.4    1
(FI037099) CHO_OF6456xf23r1.ab1 CHO_OF6 Nicotiana tabacum ge...    34   3.7    2

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB051504_1(AB051504|pid:none) Homo sapiens mRNA for KIAA1717 pro...    87   4e-16
BX538351_69(BX538351|pid:none) Cryptosporidium parvum chromosome...    76   8e-13
AM502248_374(AM502248|pid:none) Leishmania infantum chromosome 30.     74   4e-12
CT005267_354(CT005267|pid:none) Leishmania major strain Friedlin...    73   7e-12
AM910988_157(AM910988|pid:none) Plasmodium knowlesi strain H chr...    72   9e-12
AE014185_303(AE014185|pid:none) Plasmodium falciparum 3D7 chromo...    72   9e-12
DQ141553_1(DQ141553|pid:none) Mus musculus haplotype tw32 TSGA2 ...    71   2e-11
CP000934_1324(CP000934|pid:none) Cellvibrio japonicus Ueda107, c...    70   3e-11
CR954209_188(CR954209|pid:none) Ostreococcus tauri strain OTTH05...    70   4e-11
DQ141555_1(DQ141555|pid:none) Mus musculus strain C57BL/6 TSGA2 ...    70   6e-11

 psg: 0.45  gvh: -0.09  alm: 0.51  top: 0.53  tms: 0.00  mit: 0.35  mip: 0.00
 nuc: 0.16  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 68.0 %: nuclear
	 24.0 %: cytoplasmic
	  4.0 %: cytoskeletal
	  4.0 %: plasma membrane

>> prediction for SFK237 is nuc

>SFK237F.Seq
AATTTTATAGAGCCACAATTATTAACACACTCAAATGAAAAAGAAAATAAAAAATACAAA
TAAAAAAATAGTTAAAAAGAAGCCACAACCTGTAAATAATAATAGTAATAAAAATAAAAA
ACCCATATCAATTAATAATAAGATAAATAAAGAAGTTGTTAAAATAGAAAATAAATCTGA
AAAAGGAGATGATTTTTTATATGTTGGTGAATTTATAAATAATGAAAAAAATGGTAAAGG
TATAATTTATTATGAGGATGGGACATTAATTGAAGGTAATTGGAAAGATGGTGAATTAAA
TGGGCAAGGTATATTTAAAACAACGGAATTAATAATTAGTGGAGAATTTATTGATGGTGA
ATTAAGTGGACAAGTTGAAGAGATTGATAAAGAAACTGGCAAACTAGTATTTAAAGGTGA
ATATTCTCAAGGTCAAAGACATGGTCGTGGTAAATTAATAATGATTGAAGATGGTGGAGA
ACTTACAGGCACATGGGTCGATGGTAAAATGACAGGATACGCAGAATACACATTCCCAAC
ATGTAATGGTAGATTTAAAATCCAAGGTCAATGGTTGAATGGAGATTT----------