>SSA694 (SSA694Q) /CSM/SS/SSA6-D/SSA694Q.Seq.d/
AGAAAATATTAAAATTAAAAAATGGATTGTGCAATTACAAAAGATGTAGAGGATATGTTA
AGAAAATTTGATTCAAATGGTGATGGTAATATTACATTTGATGAAGCTGTAAAACGTTTG
AAGGAAACCGGTTCAAAAGATCCATTACGTGCTGCCTCTTCAATGTTTATTTCTCTTGAT
AAGGATAAGGATGGAATTATTTCAATAAAAGAGATTCATGGCCATAAGGCTGATGTTGCT
GCAAAGAAATTGCAAAAGGCAATTAACAACATCTGTAACAACTTCTTGAAAGGCTATGAC
ACTGATAAGGATGGAAGGATCTCATGGGATGAAGTATGCAATTGGGTAAATAAAAACAAT
CCAGATGCAATTGCTCCACTTATGATTGTTGAAAATTTCTTTAGTGAATTGGATAAAGAT
AATGACAGATTCGTAACCAAGTGTGAACTTCAGGAGTACGTTACTAAATACAAAAGTCTC
CCAGAACAATAAATAATTTATTGTTCAAATTCAATAATTATTAATCAACATTTATAATTT
TCATTTTTAAAAAAATTTAAATAAATAAATAAATXXXXXXXXXX

rky*n*KMDCAITKDVEDMLRKFDSNGDGNITFDEAVKRLKETGSKDPLRAASSMFISLD
KDKDGIISIKEIHGHKADVAAKKLQKAINNICNNFLKGYDTDKDGRISWDEVCNWVNKNN
PDAIAPLMIVENFFSELDKDNDRFVTKCELQEYVTKYKSLPEQ*iiycsnsiiinqhl*f
sflkkfk*ink---

Frame A:
rky*n*KMDCAITKDVEDMLRKFDSNGDGNITFDEAVKRLKETGSKDPLRAASSMFISLD
KDKDGIISIKEIHGHKADVAAKKLQKAINNICNNFLKGYDTDKDGRISWDEVCNWVNKNN
PDAIAPLMIVENFFSELDKDNDRFVTKCELQEYVTKYKSLPEQ*iiycsnsiiinqhl*f
sflkkfk*ink---


Frame B:
enikikkwivqlqkm*ric*enliqmvmvilhlmkl*nv*rkpvqkihyvlplqclflli
rirmelfq*krfmairlmllqrnckrqlttsvtts*kamtlirmegshgmkyaig*ikti
qmqllhl*llkislvnwikimtds*psvnfrstllntkvsqnnk*fivqiq*lliniynf
hf*knlnk*i---


Frame C:
kilklknglcnykrcrgyvkki*fkw*w*yyi**scktfegnrfkrsitcclfnvyfs**
g*gwnyfnkrdswp*g*ccckeiakgn*qhl*qllerl*h**gwkdlmg*smqlgk*kqs
rcncstydc*kfl**ig*r**qirnqv*tsgvry*iqksprtinnllfkfnny*stfiif
ifkki*ink*---

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SSM408 (SSM408Q) /CSM/SS/SSM4-A/SSM408Q.Seq.d/                       1015   0.0
SSM294 (SSM294Q) /CSM/SS/SSM2-D/SSM294Q.Seq.d/                       1015   0.0
SSL192 (SSL192Q) /CSM/SS/SSL1-D/SSL192Q.Seq.d/                       1015   0.0
SSL187 (SSL187Q) /CSM/SS/SSL1-D/SSL187Q.Seq.d/                       1015   0.0
SSK751 (SSK751Q) /CSM/SS/SSK7-C/SSK751Q.Seq.d/                       1015   0.0
SSK729 (SSK729Q) /CSM/SS/SSK7-B/SSK729Q.Seq.d/                       1015   0.0
SSH153 (SSH153Q) /CSM/SS/SSH1-C/SSH153Q.Seq.d/                       1015   0.0
SSG852 (SSG852Q) /CSM/SS/SSG8-C/SSG852Q.Seq.d/                       1015   0.0
SSG624 (SSG624Q) /CSM/SS/SSG6-A/SSG624Q.Seq.d/                       1015   0.0
SSG166 (SSG166Q) /CSM/SS/SSG1-C/SSG166Q.Seq.d/                       1015   0.0

                                                               Score     E
Sequences producing significant alignments:                    (bits)  Value  N

X82784|X82784.1 D.discoideum mRNA for calcium binding protein.   997  0.0  2
AC116987|AC116987.2 Dictyostelium discoideum chromosome 2 map 3527441-3568052 strain AX4, complete sequence.   920  0.0  4
BX465853|BX465853.4 Zebrafish DNA sequence *** SEQUENCING IN PROGRESS *** from clone.    40  0.004  5
AC004688|AC004688.8 Plasmodium falciparum chromosome 12 clone 3D7, *** SEQUENCING IN PROGRESS ***, 4 unordered pieces.    36  0.005  5
AE014831|AE014831.1 Plasmodium falciparum 3D7 chromosome 10 section 3 of 7 of the complete sequence.    38  0.006  5
AE014852|AE014852.2 Plasmodium falciparum 3D7 chromosome 12, section 9 of 9 of the complete sequence.    38  0.007  5
AC102539|AC102539.3 Mus musculus clone RP23-88C18, WORKING DRAFT SEQUENCE, 9 unordered pieces.    38  0.013  3
AC139135|AC139135.5 Mus musculus chromosome 9, clone RP24-360E17, complete sequence.    46  0.017  3
AC117080|AC117080.2 Dictyostelium discoideum chromosome 2 map complement(821514-735598) strain AX4, complete sequence.    34  0.017  6
AC006279|AC006279.8 Plasmodium falciparum chromosome 12 clone 3D7, *** SEQUENCING IN PROGRESS ***, 5 unordered pieces.    38  0.018  5

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(P54653) RecName: Full=Calcium-binding protein 2;  &S62881(S6288...    79   7e-14
(Q966Q9) RecName: Full=Calcium-binding protein H; AltName: Full=...    69   7e-11
(Q869S9) RecName: Full=Calcium-binding protein E; AltName: Full=...    69   9e-11
AB070447_1(AB070447|pid:none) Dictyostelium discoideum cbpE mRNA...    69   9e-11
AJ297597_1(AJ297597|pid:none) Dictyostelium discoideum mRNA for ...    67   3e-10
(Q54RF4) RecName: Full=Calcium-binding protein 4a;                     67   3e-10
(P09485) RecName: Full=Calcium-binding protein LPS1-alpha;             57   4e-07
CR940353_624(CR940353|pid:none) Theileria annulata strain Ankara...    56   8e-07
EF523472_1(EF523472|pid:none) Synthetic construct putative aller...    55   1e-06
(O64943) RecName: Full=Polcalcin Jun o 2; AltName: Full=Calcium-...    55   2e-06

 psg: 0.75  gvh: 0.27  alm: 0.47  top: 0.53  tms: 0.00  mit: 0.21  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 52.0 %: nuclear
	 28.0 %: cytoplasmic
	  8.0 %: cytoskeletal
	  4.0 %: mitochondrial
	  4.0 %: vacuolar
	  4.0 %: vesicles of secretory system

>> prediction for SSA694 is nuc

>SSA694F.Seq
AGAAAATATTAAAATTAAAAAATGGATTGTGCAATTACAAAAGATGTAGAGGATATGTTA
AGAAAATTTGATTCAAATGGTGATGGTAATATTACATTTGATGAAGCTGTAAAACGTTTG
AAGGAAACCGGTTCAAAAGATCCATTACGTGCTGCCTCTTCAATGTTTATTTCTCTTGAT
AAGGATAAGGATGGAATTATTTCAATAAAAGAGATTCATGGCCATAAGGCTGATGTTGCT
GCAAAGAAATTGCAAAAGGCAATTAACAACATCTGTAACAACTTCTTGAAAGGCTATGAC
ACTGATAAGGATGGAAGGATCTCATGGGATGAAGTATGCAATTGGGTAAATAAAAACAAT
CCAGATGCAATTGCTCCACTTATGATTGTTGAAAATTTCTTTAGTGAATTGGATAAAGAT
AATGACAGATTCGTAACCAAGTGTGAACTTCAGGAGTACGTTACTAAATACAAAAGTCTC
CCAGAACAATAAATAATTTATTGTTCAAATTCAATAATTATTAATCAACATTTATAATTT
TCATTTTTAAAAAAATTTAAATAAATAAATAAAT----------