>SSC337 (SSC337Q) /CSM/SS/SSC3-B/SSC337Q.Seq.d/
XXXXXXXXXXACCTGAAAGAAATCAACACATTCAAGAGATTGAAAACGGCATGAAACTAG
GCCACCACAATAATATAGCACAGGTGATGTGTGCATGGGAAGAGGGCGGACACATTTTCA
TACAAATGGAGCTATGCGAGCGTGGCAACCTAAAGGATGCCCTGAATTTAGCAGTTCAGG
AGGAGGGTGGTCTTGGCAAGCTACCCGANTACATGATTTGGCAATACCTTTGCGATATCG
CCAATGGTCTATCACATGTGCATGAAAAGGGTATAATGCATTTAGATATCAAGCCTGAGA
ATTTACTTTTTTCAAATGATGGAGTTTTAAAAATTGGTGATTTCGGCGTTTGCAGTACAA
CAACGGGTGGTGATGATTCTGAAGGTGACCAAATCTATATGGCTCCTGAATTATTAAATG
ATATTCATACACCATCTGCTGATATCTTTAGTTTAGGTATAACACTTTATGAAATGGCAA
CCAATTATAACCTTCCTCAAAAAGGTCAATGGTGGAGAAATTTACGTGAAGGTAAGATAC
CTTTTCCCGAAAATGATGATTCAATCTCTCAAGATCTAAAAGATTTAATCATTTTAATGA
TGAATCCTGATCATACAAAAAGAATTACAATTCAATCACTTTTAAAATATGATAAATTAC
AATCTGTTATAACTTTAAAACGTTCAACATCTACATTATATAGACTTCAAAGAAAATTAT
TCT

---PERNQHIQEIENGMKLGHHNNIAQVMCAWEEGGHIFIQMELCERGNLKDALNLAVQE
EGGLGKLPXYMIWQYLCDIANGLSHVHEKGIMHLDIKPENLLFSNDGVLKIGDFGVCSTT
TGGDDSEGDQIYMAPELLNDIHTPSADIFSLGITLYEMATNYNLPQKGQWWRNLREGKIP
FPENDDSISQDLKDLIILMMNPDHTKRITIQSLLKYDKLQSVITLKRSTSTLYRLQRKLF

Frame A:
---PERNQHIQEIENGMKLGHHNNIAQVMCAWEEGGHIFIQMELCERGNLKDALNLAVQE
EGGLGKLPXYMIWQYLCDIANGLSHVHEKGIMHLDIKPENLLFSNDGVLKIGDFGVCSTT
TGGDDSEGDQIYMAPELLNDIHTPSADIFSLGITLYEMATNYNLPQKGQWWRNLREGKIP
FPENDDSISQDLKDLIILMMNPDHTKRITIQSLLKYDKLQSVITLKRSTSTLYRLQRKLF


Frame B:
---lkeintfkrlkta*n*attii*hr*cvhgkradtfsykwsyasvat*rmp*i*qfrr
rvvlasypxt*fgntfaispmvyhmcmkrv*ci*isslriyffqmmef*klvisafavqq
rvvmilkvtksiwllny*mifihhllislv*v*hfmkwqpiitflkkvnggeiyvkvryl
fpkmmiqslki*ki*sf***iliiqkelqfnhf*nminynll*l*nvqhlhyidfkenys


Frame C:
---*kksthsrd*krhetrppq*ystgdvcmgrgrthfhtngamrawqpkgcpefsssgg
gwswqatrxhdlaiplryrqwsitca*kgynafryqa*eftffk*wsfknw*frrlqynn
gw**f*r*pnlygs*iik*ysytic*yl*fryntl*ngnql*psskrsmvekft*r*dtf
srk**fnlsrskrfnhfndes*sykknynsitfki**iticynfktfniyii*tskkii

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SSC337 (SSC337Q) /CSM/SS/SSC3-B/SSC337Q.Seq.d/                       1407   0.0
SFI209 (SFI209Q) /CSM/SF/SFI2-A/SFI209Q.Seq.d/                       1382   0.0
SSK760 (SSK760Q) /CSM/SS/SSK7-C/SSK760Q.Seq.d/                       1082   0.0
SFI157 (SFI157Q) /CSM/SF/SFI1-C/SFI157Q.Seq.d/                        926   0.0
SSM877 (SSM877Q) /CSM/SS/SSM8-D/SSM877Q.Seq.d/                        517   e-146
SSL816 (SSL816Q) /CSM/SS/SSL8-A/SSL816Q.Seq.d/                        198   8e-50
SSM596 (SSM596Q) /CSM/SS/SSM5-D/SSM596Q.Seq.d/                        180   2e-44
SSC238 (SSC238Q) /CSM/SS/SSC2-B/SSC238Q.Seq.d/                         44   0.003
SFL257 (SFL257Q) /CSM/SF/SFL2-C/SFL257Q.Seq.d/                         44   0.003
SFJ295 (SFJ295Q) /CSM/SF/SFJ2-D/SFJ295Q.Seq.d/                         38   0.18

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(C84147) Dictyostelium discoideum slug cDNA, clone SSC337.       1407   0.0    1
(BJ402453) Dictyostelium discoideum cDNA clone:dds17a04, 3' ...  1382   0.0    1
(C94300) Dictyostelium discoideum slug cDNA, clone SSK760.       1082   0.0    1
(BJ402608) Dictyostelium discoideum cDNA clone:dds17a15, 3' ...   926   0.0    1
(C93252) Dictyostelium discoideum slug cDNA, clone SSM877.        517   e-142  1
(C93874) Dictyostelium discoideum slug cDNA, clone SSL816.        198   2e-46  1
(C93138) Dictyostelium discoideum slug cDNA, clone SSM596.        174   3e-39  1
(CF710525) CCAEG37TR C.neoformans strain JEC21 Cryptococcus ...    46   0.002  2
(CF692868) CCADZ30TF C.neoformans strain JEC21 Cryptococcus ...    46   0.002  2
(CF689790) CCAH537TF C.neoformans strain JEC21 Cryptococcus ...    46   0.002  2

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC161784_1(BC161784|pid:none) Xenopus tropicalis hypothetical pr...   160   3e-38
(Q91618) RecName: Full=Membrane-associated tyrosine- and threoni...   160   4e-38
AB060280_1(AB060280|pid:none) Asterina pectinifera Myt1 mRNA, co...   158   1e-37
(P07527) RecName: Full=Mitosis inhibitor protein kinase wee1;   ...   157   4e-37
(Q9ESG9) RecName: Full=Membrane-associated tyrosine- and threoni...   155   9e-37
AK158550_1(AK158550|pid:none) Mus musculus visual cortex cDNA, R...   154   3e-36
AK097642_1(AK097642|pid:none) Homo sapiens cDNA FLJ40323 fis, cl...   152   8e-36
AF014118_1(AF014118|pid:none) Homo sapiens membrane-associated k...   152   8e-36
AC004235_1(AC004235|pid:none) Homo sapiens chromosome 16, cosmid...   152   8e-36
BC121161_1(BC121161|pid:none) Homo sapiens protein kinase, membr...   152   8e-36

 psg: 0.75  gvh: 0.23  alm: 0.46  top: 0.53  tms: 0.00  mit: 0.22  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.40  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 44.0 %: cytoplasmic
	 44.0 %: nuclear
	  4.0 %: vacuolar
	  4.0 %: mitochondrial
	  4.0 %: peroxisomal

>> prediction for SSC337 is cyt

>SSC337Z.Seq
----------ACCTGAAAGAAATCAACACATTCAAGAGATTGAAAACGGCATGAAACTAG
GCCACCACAATAATATAGCACAGGTGATGTGTGCATGGGAAGAGGGCGGACACATTTTCA
TACAAATGGAGCTATGCGAGCGTGGCAACCTAAAGGATGCCCTGAATTTAGCAGTTCAGG
AGGAGGGTGGTCTTGGCAAGCTACCCGANTACATGATTTGGCAATACCTTTGCGATATCG
CCAATGGTCTATCACATGTGCATGAAAAGGGTATAATGCATTTAGATATCAAGCCTGAGA
ATTTACTTTTTTCAAATGATGGAGTTTTAAAAATTGGTGATTTCGGCGTTTGCAGTACAA
CAACGGGTGGTGATGATTCTGAAGGTGACCAAATCTATATGGCTCCTGAATTATTAAATG
ATATTCATACACCATCTGCTGATATCTTTAGTTTAGGTATAACACTTTATGAAATGGCAA
CCAATTATAACCTTCCTCAAAAAGGTCAATGGTGGAGAAATTTACGTGAAGGTAAGATAC
CTTTTCCCGAAAATGATGATTCAATCTCTCAAGATCTAAAAGATTTAATCATTTTAATGA
TGAATCCTGATCATACAAAAAGAATTACAATTCAATCACTTTTAAAATATGATAAATTAC
AATCTGTTATAACTTTAAAACGTTCAACATCTACATTATATAGACTTCAAAGAAAATTAT
TCT