>VFJ657 (VFJ657Q) /CSM/VF/VFJ6-C/VFJ657Q.Seq.d/
AATTTAACAAATTTAATAAATAAAAAAATGACTAAACCGTTGCTTCATATGAATAGATGA
AAAAAGATTCCTTACATTATTAGGTAAATTAATTGGTGAAACTGAAAATCTCCAAAATAG
ACCACCAGCTTTAATTCCAATTGAAGATAATGCAGGTCGTCATGTCATTGAAGCTTTAAC
TCCATACTTAAAAGCAAATGGTGGTGTTTTAGAATTAGAACAAGTTCACTGTGATCCAGT
AAACTATCCAAAAAGAGGTAACATTATTATTGAATACCCAGGTACCTCCAAAGGAACTAG
TTCACCAAAAACAATTTCATTTGTTGGTTCACATTTAGATGTAGTTCCAGCTGATAAAAC
TGCTTGGGATAGAAATCCATTCCAATTAATTATTGAAGGTGATAAATTATATGGTAGAGG
TACAACTGATTGTTTAGGACATGTTGCATTATTAACAGATTTATTTATTCAACTTGCAAC
TGAAAAACCAGCACTTAAACATTCAATTTTTGCAGTATTTATTGTAAGTGAAGAGAATGA
TGAAATTCCAGGTATTGGTGTCGATGCATTAGATCATAGTGGAAAGATXXXXXXXXXXGG
TCAACGAAGCATTGGCTGAGATTCAACGTCGTTTCTACATTGACTTCAAACCACATCCAA
AAGAAGCCGAATATAAATTCGATTGTTCATCAACAATGAAACCAACCTTATGGAAACCAA
TCGCCGGTAGTTACAATACCATTCCAGGTGAGTCAACCATTTGTGGTGATATTCGTTTAA
CTCCATTCTATGATATGAAAGAAATGCGTGCAAAAGTTGAAGGTTATATCAAAGATATCA
ATGCCAATATCACTGAACTTCGTAATAGAGGTCCATACAGTAAATATGATGTACCAGCCT
CTGAAGGTGTTGAACCAGTCAAAGGTTCAGTCTCTATTGAATGGTTAGGTGAAGCATCAG
CTGGTGTCGCTTGTAAACTCGACTCTGATGGTTACAAAGCACTTGGTAAAGCTACTTCTG
AAATTTTAGGTTCATTAACTCCAGTTGCAACTTGTGGTACTCTTCCTTTGGTTCGTGATC
TCCAAGATAGTGGTTTCGATATTCAAATTACTGGTTTTGGTAAAGAAGAAACTTATCATG
CTGATAATGAATATGCTTTATTATCTGATTTTAAAAATGCTATTAAAATTTTATCTCGTA
CAATTATTTATTAGAAAAAAATTAAATTAAAATCCAATAAAACTCTTTTTT

i*qi**ikk*lnrcfi*IDEKRFLTLLGKLIGETENLQNRPPALIPIEDNAGRHVIEALT
PYLKANGGVLELEQVHCDPVNYPKRGNIIIEYPGTSKGTSSPKTISFVGSHLDVVPADKT
AWDRNPFQLIIEGDKLYGRGTTDCLGHVALLTDLFIQLATEKPALKHSIFAVFIVSEEND
EIPGIGVDALDHSGK---

---VNEALAEIQRRFYIDFKPHPKEAEYKFDCSSTMKPTLWKPIAGSYNTIPGESTICGD
IRLTPFYDMKEMRAKVEGYIKDINANITELRNRGPYSKYDVPASEGVEPVKGSVSIEWLG
EASAGVACKLDSDGYKALGKATSEILGSLTPVATCGTLPLVRDLQDSGFDIQITGFGKEE
TYHADNEYALLSDFKNAIKILSRTIIY*kkiklksnktlf

Frame A:
nltnlinkkmtkpllhmnr*kkipyiir*inw*n*kspk*ttsfnsn*r*crssch*sfn
silkskwwcfrirtssl*ssklskkr*hyy*iprylqrn*ftknnficwftfrcsss**n
clg*ksipiny*r**iiw*ryn*lfrtcciinrfiystcn*ktst*tfnfcsiyck*re*
*nsrywcrcirs*wkd---

---gqrsig*dstsflh*lqttskrsri*irlfinnetnlmetnrr*lqyhsr*vnhlw*
ysfnsil*yernacks*rlyqryqcqyh*ts**rsiq*i*ctsl*rc*tsqrfsly*mvr
*siswcrl*trl*wlqstw*syf*nfrfinsscnlwyssfgs*spr*wfrysnywfw*rr
nlsc***icfii*f*kcy*nfisynyllekn*ikiq*nsf

Frame B:
i*qi**ikk*lnrcfi*IDEKRFLTLLGKLIGETENLQNRPPALIPIEDNAGRHVIEALT
PYLKANGGVLELEQVHCDPVNYPKRGNIIIEYPGTSKGTSSPKTISFVGSHLDVVPADKT
AWDRNPFQLIIEGDKLYGRGTTDCLGHVALLTDLFIQLATEKPALKHSIFAVFIVSEEND
EIPGIGVDALDHSGK---

---VNEALAEIQRRFYIDFKPHPKEAEYKFDCSSTMKPTLWKPIAGSYNTIPGESTICGD
IRLTPFYDMKEMRAKVEGYIKDINANITELRNRGPYSKYDVPASEGVEPVKGSVSIEWLG
EASAGVACKLDSDGYKALGKATSEILGSLTPVATCGTLPLVRDLQDSGFDIQITGFGKEE
TYHADNEYALLSDFKNAIKILSRTIIY*kkiklksnktlf

Frame C:
fnkfnk*knd*tvasye*mkkdslhy*vn*lvklkiskidhql*fqlkimqvvmslkl*l
ht*kqmvvf*n*nkftviq*tiqkevtlllntqvppkelvhqkqfhllvhi*m*fqlikl
lgieihsn*llkvinymvevqliv*dmlhy*qiylfnlqlknqhlniqflqyll*vkrmm
kfqvlvsmh*iiver---

---stkhwlrfnvvstltsnhiqkkpninsivhqq*nqpygnqspvvtipfqvsqpfvvi
fv*lhsmi*kkcvqklkviskismpislnfvievhtvnmmyqplkvlnqskvqsllng*v
khqlvslvnstlmvtkhlvklllkf*vh*lqlqlvvlflwfviskivvsifkllvlvkkk
limlimnmlyylilkmllkfylvqlfirkkln*npiklff

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

VFJ657 (VFJ657Q) /CSM/VF/VFJ6-C/VFJ657Q.Seq.d/                       2337   0.0
VHJ351 (VHJ351Q) /CSM/VH/VHJ3-C/VHJ351Q.Seq.d/                       1253   0.0
VHC429 (VHC429Q) /CSM/VH/VHC4-B/VHC429Q.Seq.d/                       1253   0.0
VFF823 (VFF823Q) /CSM/VF/VFF8-A/VFF823Q.Seq.d/                       1253   0.0
VFF792 (VFF792Q) /CSM/VF/VFF7-D/VFF792Q.Seq.d/                       1253   0.0
VFC506 (VFC506Q) /CSM/VF/VFC5-A/VFC506Q.Seq.d/                       1253   0.0
VFA581 (VFA581Q) /CSM/VF/VFA5-D/VFA581Q.Seq.d/                       1251   0.0
VFN352 (VFN352Q) /CSM/VF/VFN3-C/VFN352Q.Seq.d/                       1247   0.0
VFJ241 (VFJ241Q) /CSM/VF/VFJ2-B/VFJ241Q.Seq.d/                       1247   0.0
VFI215 (VFI215Q) /CSM/VF/VFI2-A/VFI215Q.Seq.d/                       1247   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

U23957|U23957.1 Dictyostelium discoideum P52D mRNA, complete cds.  1179   0.0    3
AC108003|AC108003.2 Homo sapiens chromosome 8 clone CTD-2337K24 map 8, LOW-PASS SEQUENCE SAMPLING.    42   0.004  5
AB036420|AB036420.1 Citrullus lanatus mRNA for DIP-1, complete cds.    40   0.010  2
AP004171|AP004171.1 Mycoplasma penetrans genomic DNA, complete sequence, section 2/5.    30   0.010  18
BX248584|BX248584.1 Blochmannia floridanus complete genome; segment 1/3.    34   0.032  12
AC116977|AC116977.2 Dictyostelium discoideum chromosome 2 map 5515173-5817331 strain AX4, complete sequence.    28   0.042  19
BZ938047|BZ938047.1 CH240_62J18.TJ CHORI-240 Bos taurus genomic clone CH240_62J18, genomic survey sequence.    42   0.052  2
AC116988|AC116988.2 Dictyostelium discoideum chromosome 2 map 6445720-6776760 strain AX4, complete sequence.    36   0.090  15
AP003362|AP003362.2 Staphylococcus aureus subsp. aureus Mu50 genomic DNA, complete sequence, section 5/9.    34   0.11   16
AY379773|AY379773.1 Medicago truncatula chromosome 5 clone MtH1-003I09 strain Jemalong A17, WORKING DRAFT SEQUENCE, 2 ordered pieces.    30   0.13   9

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(P54638) RecName: Full=Acetylornithine deacetylase;          EC=...   412   e-113
U23957_1(U23957|pid:none) Dictyostelium discoideum P52D mRNA, co...   407   e-112
AB036420_1(AB036420|pid:none) Citrullus lanatus mRNA for DIP-1, ...   213   9e-54
AF360346_1(AF360346|pid:none) Arabidopsis thaliana putative N-ac...   209   2e-52
AL021889_1(AL021889|pid:none) Arabidopsis thaliana DNA chromosom...   209   2e-52
AF170086_1(AF170086|pid:none) Cucurbita pepo silverleaf whitefly...   203   1e-50
FJ899850_1(FJ899850|pid:none) Populus maximowiczii x Populus nig...   192   2e-47
FJ899849_1(FJ899849|pid:none) Populus maximowiczii x Populus nig...   192   2e-47
AK101568_1(AK101568|pid:none) Oryza sativa Japonica Group cDNA c...   189   1e-46
CP001325_366(CP001325|pid:none) Micromonas sp. RCC299 chromosome...   181   5e-44

 psg: 0.84  gvh: 0.42  alm: 0.37  top: 0.53  tms: 0.00  mit: 0.21  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.20  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 48.0 %: cytoplasmic
	 28.0 %: nuclear
	 20.0 %: cytoskeletal
	  4.0 %: peroxisomal

>> prediction for VFJ657 is cyt

>VFJ657F.Seq
AATTTAACAAATTTAATAAATAAAAAAATGACTAAACCGTTGCTTCATATGAATAGATGA
AAAAAGATTCCTTACATTATTAGGTAAATTAATTGGTGAAACTGAAAATCTCCAAAATAG
ACCACCAGCTTTAATTCCAATTGAAGATAATGCAGGTCGTCATGTCATTGAAGCTTTAAC
TCCATACTTAAAAGCAAATGGTGGTGTTTTAGAATTAGAACAAGTTCACTGTGATCCAGT
AAACTATCCAAAAAGAGGTAACATTATTATTGAATACCCAGGTACCTCCAAAGGAACTAG
TTCACCAAAAACAATTTCATTTGTTGGTTCACATTTAGATGTAGTTCCAGCTGATAAAAC
TGCTTGGGATAGAAATCCATTCCAATTAATTATTGAAGGTGATAAATTATATGGTAGAGG
TACAACTGATTGTTTAGGACATGTTGCATTATTAACAGATTTATTTATTCAACTTGCAAC
TGAAAAACCAGCACTTAAACATTCAATTTTTGCAGTATTTATTGTAAGTGAAGAGAATGA
TGAAATTCCAGGTATTGGTGTCGATGCATTAGATCATAGTGGAAAGATNNNNNNNNNN

>VFJ657Z.Seq
NNNNNNNNNNGGTCAACGAAGCATTGGCTGAGATTCAACGTCGTTTCTACATTGACTTCA
AACCACATCCAAAAGAAGCCGAATATAAATTCGATTGTTCATCAACAATGAAACCAACCT
TATGGAAACCAATCGCCGGTAGTTACAATACCATTCCAGGTGAGTCAACCATTTGTGGTG
ATATTCGTTTAACTCCATTCTATGATATGAAAGAAATGCGTGCAAAAGTTGAAGGTTATA
TCAAAGATATCAATGCCAATATCACTGAACTTCGTAATAGAGGTCCATACAGTAAATATG
ATGTACCAGCCTCTGAAGGTGTTGAACCAGTCAAAGGTTCAGTCTCTATTGAATGGTTAG
GTGAAGCATCAGCTGGTGTCGCTTGTAAACTCGACTCTGATGGTTACAAAGCACTTGGTA
AAGCTACTTCTGAAATTTTAGGTTCATTAACTCCAGTTGCAACTTGTGGTACTCTTCCTT
TGGTTCGTGATCTCCAAGATAGTGGTTTCGATATTCAAATTACTGGTTTTGGTAAAGAAG
AAACTTATCATGCTGATAATGAATATGCTTTATTATCTGATTTTAAAAATGCTATTAAAA
TTTTATCTCGTACAATTATTTATTAGAAAAAAATTAAATTAAAATCCAATAAAACTCTTT
TTT

>VFJ657P.Seq
AATTTAACAAATTTAATAAATAAAAAAATGACTAAACCGTTGCTTCATATGAATAGATGA
AAAAAGATTCCTTACATTATTAGGTAAATTAATTGGTGAAACTGAAAATCTCCAAAATAG
ACCACCAGCTTTAATTCCAATTGAAGATAATGCAGGTCGTCATGTCATTGAAGCTTTAAC
TCCATACTTAAAAGCAAATGGTGGTGTTTTAGAATTAGAACAAGTTCACTGTGATCCAGT
AAACTATCCAAAAAGAGGTAACATTATTATTGAATACCCAGGTACCTCCAAAGGAACTAG
TTCACCAAAAACAATTTCATTTGTTGGTTCACATTTAGATGTAGTTCCAGCTGATAAAAC
TGCTTGGGATAGAAATCCATTCCAATTAATTATTGAAGGTGATAAATTATATGGTAGAGG
TACAACTGATTGTTTAGGACATGTTGCATTATTAACAGATTTATTTATTCAACTTGCAAC
TGAAAAACCAGCACTTAAACATTCAATTTTTGCAGTATTTATTGTAAGTGAAGAGAATGA
TGAAATTCCAGGTATTGGTGTCGATGCATTAGATCATAGTGGAAAGAT----------GG
TCAACGAAGCATTGGCTGAGATTCAACGTCGTTTCTACATTGACTTCAAACCACATCCAA
AAGAAGCCGAATATAAATTCGATTGTTCATCAACAATGAAACCAACCTTATGGAAACCAA
TCGCCGGTAGTTACAATACCATTCCAGGTGAGTCAACCATTTGTGGTGATATTCGTTTAA
CTCCATTCTATGATATGAAAGAAATGCGTGCAAAAGTTGAAGGTTATATCAAAGATATCA
ATGCCAATATCACTGAACTTCGTAATAGAGGTCCATACAGTAAATATGATGTACCAGCCT
CTGAAGGTGTTGAACCAGTCAAAGGTTCAGTCTCTATTGAATGGTTAGGTGAAGCATCAG
CTGGTGTCGCTTGTAAACTCGACTCTGATGGTTACAAAGCACTTGGTAAAGCTACTTCTG
AAATTTTAGGTTCATTAACTCCAGTTGCAACTTGTGGTACTCTTCCTTTGGTTCGTGATC
TCCAAGATAGTGGTTTCGATATTCAAATTACTGGTTTTGGTAAAGAAGAAACTTATCATG
CTGATAATGAATATGCTTTATTATCTGATTTTAAAAATGCTATTAAAATTTTATCTCGTA
CAATTATTTATTAGAAAAAAATTAAATTAAAATCCAATAAAACTCTTTTTT