>VSF847 (VSF847Q) /CSM/VS/VSF8-B/VSF847Q.Seq.d/
GTAAAAAAAAAAXXXXXXXXXXATGGATTTAGAGGCNAGTCAAATTCAAGNATTTTTTAA
TATTCCAGNTGATAATTTATATGCAGAACCATTAATTGTAAAATACATTGAAAAACATTA
TAANCATTTAGGTGAAAAGGTTGTAATTTCACCAGCNGTTGATGGAGTAAAAANAGCAAA
ATTAGTATCAGATCAATTANATTGTGATTTAGCANTTTTAGATAGACAAACTAAAGGTNA
TAAAGAGGATATGATTTTAGTTGGTGATGTTAGTGGTANAGTNGCCATCATTANTGGATC
NATCGCAGATACATGTGAAACTTNNGCATNATCNGCCANNATNTTGAAANCAAAAGGNGC
AACCAATGTNTTTGCTTTGGNATCACNTGGTGAGANTAAGTGGTAATG

VKKK---

---MDLEASQIQXFFNIPXDNLYAEPLIVKYIEKHYXHLGEKVVISPAVDGVKXAKLVSD
QLXCDLAXLDRQTKGXKEDMILVGDVSGXVAIIXGSIADTCETXAXSAXXLKXKGATNVF
ALXSXGEXKW*

Frame A:
VKKK---

---MDLEASQIQXFFNIPXDNLYAEPLIVKYIEKHYXHLGEKVVISPAVDGVKXAKLVSD
QLXCDLAXLDRQTKGXKEDMILVGDVSGXVAIIXGSIADTCETXAXSAXXLKXKGATNVF
ALXSXGEXKW*

Frame B:
*kk---

---wi*rxvkfkxflifqxiiymqnh*l*ntlkniixi*vkrl*fhqxlme*kxqn*yqi
nxivi*xf*idklkvikri*f*lvmlvvxxpslxdxsqihvklxhxxpxx*xqkxqpmxl
lwxhxvrxsgn

Frame C:
kkk---

---gfrgxsnsxif*ysx**ficrtinckih*ktl*xfr*kgcnftsx*wskxskisirs
ixl*fsxfr*tn*rx*rgydfsw*c*wxsxhhxwixrrym*nxxxixxxxexkrxnqcxc
fgitw*x*vvm

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

VSF847 (VSF847Q) /CSM/VS/VSF8-B/VSF847Q.Seq.d/                        611   e-174
VSB188 (VSB188Q) /CSM/VS/VSB1-D/VSB188Q.Seq.d/                        563   e-160
CFK213 (CFK213Q) /CSM/CF/CFK2-A/CFK213Q.Seq.d/                        391   e-108
VFJ531 (VFJ531Q) /CSM/VF/VFJ5-B/VFJ531Q.Seq.d/                        331   5e-90
CFK144 (CFK144Q) /CSM/CF/CFK1-B/CFK144Q.Seq.d/                        252   4e-66
VFA738 (VFA738Q) /CSM/VF/VFA7-B/VFA738Q.Seq.d/                         84   2e-15
VFL516 (VFL516Q) /CSM/VF/VFL5-A/VFL516Q.Seq.d/                         80   3e-14
VFH502 (VFH502Q) /CSM/VF/VFH5-A/VFH502Q.Seq.d/                         80   3e-14
AFI390 (AFI390Q) /CSM/AF/AFI3-D/AFI390Q.Seq.d/                         70   3e-11
VSA838 (VSA838Q) /CSM/VS/VSA8-B/VSA838Q.Seq.d/                         56   4e-07

                                                               Score     E
Sequences producing significant alignments:                    (bits)  Value  N

BU797464|BU797464.1 SJF2END04 SJF Schistosoma japonicum cDNA, mRNA sequence.    74  1e-09  1
BU715644|BU715644.1 SJMCHA08 SJM Schistosoma japonicum cDNA, mRNA sequence.    66  4e-07  1
AC115577|AC115577.2 Dictyostelium discoideum chromosome 2 map 4657875-4914984 strain AX4, complete sequence.    70  4e-07  2
BI772831|BI772831.1 kp39h10.y1 TBN95TM-SSFH Strongyloides stercoralis cDNA 5' similar to TR:Q21994 Q21994 SIMILAR TO RIBOSE-PHOSPHATE PYROPHOSPHOKINASE. [1] ;, mRNA sequence.    60  1e-06  2
AL441006|AL441006.1 T3 end of clone BD0AA016B09 of library BD0AA from strain CBS 94 of  Candida tropicalis.    50  3e-05  2
AC116150|AC116150.3 Mus musculus clone RP24-66L18, WORKING DRAFT SEQUENCE, 13 ordered pieces.    46  0.33  1
AC113201|AC113201.4 Mus musculus clone RP23-271G7, *** SEQUENCING IN PROGRESS ***, 9 ordered pieces.    46  0.33  1
BH983331|BH983331.1 odf02e04.b1 B.oleracea002 Brassica oleracea genomic, DNA sequence.    44  1.3  1
BH697564|BH697564.1 BOHXD52TF BO_2_3_KB Brassica oleracea genomic clone BOHXD52, DNA sequence.    42  5.2  1
AX417046|AX417046.1 Sequence 4037 from Patent WO0228891.          42  5.2  1

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(Q54QU9) RecName: Full=Ribose-phosphate pyrophosphokinase C;    ...   205   4e-52
(Q75JN8) RecName: Full=Ribose-phosphate pyrophosphokinase B;    ...   108   7e-23
AE014296_1818(AE014296|pid:none) Drosophila melanogaster chromos...   101   7e-21
AE014296_1819(AE014296|pid:none) Drosophila melanogaster chromos...   101   7e-21
(P21108) RecName: Full=Ribose-phosphate pyrophosphokinase 3;    ...   101   9e-21
U00036_5(U00036|pid:none) Caenorhabditis elegans cosmid R151, co...   100   1e-20
AK005874_1(AK005874|pid:none) Mus musculus adult male testis cDN...   100   1e-20
BT045733_1(BT045733|pid:none) Salmo salar clone ssal-rgf-530-009...   100   1e-20
T16763(T16763) hypothetical protein R151.2 - Caenorhabditis eleg...   100   1e-20
BC109355_1(BC109355|pid:none) Mus musculus phosphoribosyl pyroph...   100   1e-20

 psg: 0.80  gvh: 0.41  alm: 0.34  top: 0.53  tms: 0.00  mit: 0.21  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.20  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 48.0 %: cytoplasmic
	 28.0 %: nuclear
	 20.0 %: cytoskeletal
	  4.0 %: peroxisomal

>> prediction for VSF847 is cyt

>VSF847F.Seq
GTAAAAAAAAAA----------

>VSF847Z.Seq
----------ATGGATTTAGAGGCNAGTCAAATTCAAGNATTTTTTAATATTCCAGNTGA
TAATTTATATGCAGAACCATTAATTGTAAAATACATTGAAAAACATTATAANCATTTAGG
TGAAAAGGTTGTAATTTCACCAGCNGTTGATGGAGTAAAAANAGCAAAATTAGTATCAGA
TCAATTANATTGTGATTTAGCANTTTTAGATAGACAAACTAAAGGTNATAAAGAGGATAT
GATTTTAGTTGGTGATGTTAGTGGTANAGTNGCCATCATTANTGGATCNATCGCAGATAC
ATGTGAAACTTNNGCATNATCNGCCANNATNTTGAAANCAAAAGGNGCAACCAATGTNTT
TGCTTTGGNATCACNTGGTGAGANTAAGTGGTAATG

>VSF847P.Seq
GTAAAAAAAAAA----------ATGGATTTAGAGGCNAGTCAAATTCAAGNATTTTTTAA
TATTCCAGNTGATAATTTATATGCAGAACCATTAATTGTAAAATACATTGAAAAACATTA
TAANCATTTAGGTGAAAAGGTTGTAATTTCACCAGCNGTTGATGGAGTAAAAANAGCAAA
ATTAGTATCAGATCAATTANATTGTGATTTAGCANTTTTAGATAGACAAACTAAAGGTNA
TAAAGAGGATATGATTTTAGTTGGTGATGTTAGTGGTANAGTNGCCATCATTANTGGATC
NATCGCAGATACATGTGAAACTTNNGCATNATCNGCCANNATNTTGAAANCAAAAGGNGC
AACCAATGTNTTTGCTTTGGNATCACNTGGTGAGANTAAGTGGTAATG