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Dicty_cDB
Contig List | Clone List | cDNA Library List
Atlas
Atlas | Atlas Image List
NBDC - LSDB Archive
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Dicty_cDB
Contig List | Clone List | cDNA Library List
Atlas
Atlas | Atlas Image List
Contig-U04256-1
Contig ID Contig-U04256-1
Contig update 2002. 9.13
Contig sequence 
>Contig-U04256-1 (Contig-U04256-1Q) /CSM_Contig/Contig-U04256-1Q.Seq.d
ATTTTTATTTATTTTTAAATACAACTAAACTAAAATGACATCATTAAAAT
CATTAATAATTACACTTTTTGTATTAATTTATACTATTGTTGTTTTTTCA
CAACAAAATGAATTGGAATTTTATATTACATTTACAAAATGTCCAAATGG
AGTTGGTAGCAGTAACAATATCACAACAACAATTGGAGAATGTACATTGA
TTGAAAATTGTGGAACTTATAAATCAATTAAAACAGTTGAAAAGTTTACA
AACAATTATGAGAGTAGAGTTTTTAACAATAATAATTGTAAAGGGGTTTT
CAGTAAGAAAACCATTTGGTTTGAATGTGTACCAGGTGGTGAATATGCTG
AAGGTTCAGTTGTTTATTGTAGTCAATATGGAATTGATATGAATTTACAA
TTTTCATCATCATCAACTACAACATCAAAACAAACAACAACCATAACAAC
ATCAGGTCCATCCTCAACTGTTGTCTCATCAGGTGGTAATACATTCTCTA
CCTCTGGTAGTAGTAGCAGTGGTGGTATTAGTACTGGTTCCCCATTTAGT
ATCACTAGTGGTAGTGATAAGAATTTACAAATCTCATGAACTCCATCAAC
CACATCATCATCATCATCAACTACAACATCAAAACAAACAACAACCATAA
CAACATCAGGTCCATCCTCAACTGTTGTCTCATCAAGTGGTAATTCATTC
TCTAGCTCTAGCTCTAGTAGTAGCAGTAGTGATATTAGTACTGGTTTCCC
ATTTAGTATCACTAGTGGTAGTGACAAGAATTTACAAATCTCATCAACTC
CATCAACCACATCATCAACTACAACATCAAAACAAACCACAACCATAACA
ACATCAGGTCCATCCTCAACTGTTGTCTCATCAAGTGGTAATTCATTCTC
TAGCTCTAGCTCTAGTAGTAGTAGTACTGGTTTCCCATCAAGTATTACCA
GTGGTAGTGGCGGTAGTAATTTTCCATTTGGTACTGGTTTACCAAGTGGA
TTATTAGGTGGAAATAAAAACCAAATAAAATTTAACTAATAAAATTATAC
ACAATCAAATAAAATCATATAAATT
Gap no gap
Contig length 1075
Chromosome number (1..6, M) 3
Chromosome length 6358359
Start point 422871
End point 421795
Strand (PLUS/MINUS) MINUS
Number of clones 3
Number of EST 4
Link to clone list U04256
List of clone(s) 

est1=VFE730F,1,685
est2=VFD707E,29,1053
est3=VFE730Z,592,1053
est4=SLJ343Z,836,1076
Translated Amino Acid sequence 
flfifkyn*TKMTSLKSLIITLFVLIYTIVVFSQQNELEFYITFTKCPNGVGSSNNITTT
IGECTLIENCGTYKSIKTVEKFTNNYESRVFNNNNCKGVFSKKTIWFECVPGGEYAEGSV
VYCSQYGIDMNLQFSSSSTTTSKQTTTITTSGPSSTVVSSGGNTFSTSGSSSSGGISTGS
PFSITSGSDKNLQIS*tpsttssssstttskqtttittsgpsstvvsssgnsfsssssss
sssdistgfpfsitsgsdknlqisstpsttsstttskqtttittsgpsstvvsssgnsfs
sssssssstgfpssitsgsggsnfpfgtglpsgllggnknqikfn**nytqsnkii*i
Translated Amino Acid sequence (All Frames) 
Frame A:
ifiyf*iqln*ndiikiinnytfcinlyyccffttk*igilyyiykmskwsw*q*qyhnn
nwrmyid*klwnl*in*ns*kvykql*e*sf*q**l*rgfq*enhlv*mctrw*ic*rfs
cll*siwn*yeftifiiinyniktnnnhnnirsilncclirw*yilylw***qwwy*ywf
pi*yh*w***eftnlmnsinhiiiiinyniktnnnhnnirsilncclikw*fil*l*l**
*q**y*ywfpi*yh*w**qeftnlinsinhiinyniktnhnhnnirsilncclikw*fil
*l*l****ywfpikyyqw*wr**fsiwywftkwiirwk*kpnki*liklytik*nhin


Frame B:
flfifkyn*TKMTSLKSLIITLFVLIYTIVVFSQQNELEFYITFTKCPNGVGSSNNITTT
IGECTLIENCGTYKSIKTVEKFTNNYESRVFNNNNCKGVFSKKTIWFECVPGGEYAEGSV
VYCSQYGIDMNLQFSSSSTTTSKQTTTITTSGPSSTVVSSGGNTFSTSGSSSSGGISTGS
PFSITSGSDKNLQIS*tpsttssssstttskqtttittsgpsstvvsssgnsfsssssss
sssdistgfpfsitsgsdknlqisstpsttsstttskqtttittsgpsstvvsssgnsfs
sssssssstgfpssitsgsggsnfpfgtglpsgllggnknqikfn**nytqsnkii*i


Frame C:
fylflnttklk*hh*nh**lhfly*filllffhnkmnwnfilhlqnvqmelvavtisqqq
lenvh*lkivelinqlkqlkslqtimrvefltiiivkgfsvrkpfglnvyqvvnmlkvql
fivvnmeli*iynfhhhqlqhqnkqqp*qhqvhpqllshqvvihslplvvvavvvlvlvp
hlvslvvviriykshelhqphhhhhqlqhqnkqqp*qhqvhpqllshqvvihslalalvv
avvilvlvshlvslvvvtriykshqlhqphhqlqhqnkpqp*qhqvhpqllshqvvihsl
alalvvvvlvshqvlpvvvavvifhlvlvyqvdy*veiktk*nltnkiihnqiksyk
own update 2004. 6.10
Homology vs CSM-cDNA 
Query= Contig-U04256-1 (Contig-U04256-1Q)
/CSM_Contig/Contig-U04256-1Q.Seq.d
         (1075 letters)

Database: CSM
           6905 sequences; 5,674,871 total letters


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

Contig-U04256-1 (Contig-U04256-1Q) /CSM_Contig/Conti...  1142  0.0
Contig-U01366-1 (Contig-U01366-1Q) /CSM_Contig/Conti...    44  3e-04
Contig-U11010-1 (Contig-U11010-1Q) /CSM_Contig/Conti...    42  0.001
Contig-U11905-1 (Contig-U11905-1Q) /CSM_Contig/Conti...    40  0.005
Contig-U11067-1 (Contig-U11067-1Q) /CSM_Contig/Conti...    40  0.005
Contig-U14904-1 (Contig-U14904-1Q) /CSM_Contig/Conti...    38  0.019
Contig-U14293-1 (Contig-U14293-1Q) /CSM_Contig/Conti...    38  0.019
Contig-U13857-1 (Contig-U13857-1Q) /CSM_Contig/Conti...    38  0.019
Contig-U13247-1 (Contig-U13247-1Q) /CSM_Contig/Conti...    38  0.019
Contig-U12503-1 (Contig-U12503-1Q) /CSM_Contig/Conti...    38  0.019

>Contig-U04256-1 (Contig-U04256-1Q) /CSM_Contig/Contig-U04256-1Q.Seq.d
          Length = 1075

 Score = 1142 bits (576), Expect = 0.0
 Identities = 576/576 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atttttatttatttttaaatacaactaaactaaaatgacatcattaaaatcattaataat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   atttttatttatttttaaatacaactaaactaaaatgacatcattaaaatcattaataat 60

                                                                       
Query: 61  tacactttttgtattaatttatactattgttgttttttcacaacaaaatgaattggaatt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  tacactttttgtattaatttatactattgttgttttttcacaacaaaatgaattggaatt 120

                                                                       
Query: 121 ttatattacatttacaaaatgtccaaatggagttggtagcagtaacaatatcacaacaac 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttatattacatttacaaaatgtccaaatggagttggtagcagtaacaatatcacaacaac 180

                                                                       
Query: 181 aattggagaatgtacattgattgaaaattgtggaacttataaatcaattaaaacagttga 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aattggagaatgtacattgattgaaaattgtggaacttataaatcaattaaaacagttga 240

                                                                       
Query: 241 aaagtttacaaacaattatgagagtagagtttttaacaataataattgtaaaggggtttt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aaagtttacaaacaattatgagagtagagtttttaacaataataattgtaaaggggtttt 300

                                                                       
Query: 301 cagtaagaaaaccatttggtttgaatgtgtaccaggtggtgaatatgctgaaggttcagt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cagtaagaaaaccatttggtttgaatgtgtaccaggtggtgaatatgctgaaggttcagt 360

                                                                       
Query: 361 tgtttattgtagtcaatatggaattgatatgaatttacaattttcatcatcatcaactac 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tgtttattgtagtcaatatggaattgatatgaatttacaattttcatcatcatcaactac 420

                                                                       
Query: 421 aacatcaaaacaaacaacaaccataacaacatcaggtccatcctcaactgttgtctcatc 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aacatcaaaacaaacaacaaccataacaacatcaggtccatcctcaactgttgtctcatc 480

                                                                       
Query: 481 aggtggtaatacattctctacctctggtagtagtagcagtggtggtattagtactggttc 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aggtggtaatacattctctacctctggtagtagtagcagtggtggtattagtactggttc 540

                                               
Query: 541 cccatttagtatcactagtggtagtgataagaattt 576
           ||||||||||||||||||||||||||||||||||||
Sbjct: 541 cccatttagtatcactagtggtagtgataagaattt 576


 Score =  436 bits (220), Expect = e-122
 Identities = 220/220 (100%)
 Strand = Plus / Plus

                                                                        
Query: 856  aggtccatcctcaactgttgtctcatcaagtggtaattcattctctagctctagctctag 915
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 856  aggtccatcctcaactgttgtctcatcaagtggtaattcattctctagctctagctctag 915

                                                                        
Query: 916  tagtagtagtactggtttcccatcaagtattaccagtggtagtggcggtagtaattttcc 975
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 916  tagtagtagtactggtttcccatcaagtattaccagtggtagtggcggtagtaattttcc 975

                                                                        
Query: 976  atttggtactggtttaccaagtggattattaggtggaaataaaaaccaaataaaatttaa 1035
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 976  atttggtactggtttaccaagtggattattaggtggaaataaaaaccaaataaaatttaa 1035

                                                    
Query: 1036 ctaataaaattatacacaatcaaataaaatcatataaatt 1075
            ||||||||||||||||||||||||||||||||||||||||
Sbjct: 1036 ctaataaaattatacacaatcaaataaaatcatataaatt 1075


 Score =  258 bits (130), Expect = 1e-68
 Identities = 165/176 (93%), Gaps = 3/176 (1%)
 Strand = Plus / Plus

                                                                       
Query: 404 tcatcatcatcaactacaacatcaaaacaaacaacaaccataacaacatcaggtccatcc 463
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 tcatcatcatcaactacaacatcaaaacaaacaacaaccataacaacatcaggtccatcc 667

                                                                       
Query: 464 tcaactgttgtctcatcaggtggtaatacattctctacctctgg---tagtagtagcagt 520
           |||||||||||||||||| |||||||| ||||||||| |||| |   |||||||||||||
Sbjct: 668 tcaactgttgtctcatcaagtggtaattcattctctagctctagctctagtagtagcagt 727

                                                                   
Query: 521 ggtggtattagtactggttccccatttagtatcactagtggtagtgataagaattt 576
            ||| |||||||||||||| ||||||||||||||||||||||||||| ||||||||
Sbjct: 728 agtgatattagtactggtttcccatttagtatcactagtggtagtgacaagaattt 783


 Score =  254 bits (128), Expect = 2e-67
 Identities = 128/128 (100%)
 Strand = Plus / Plus

                                                                       
Query: 673 tgttgtctcatcaagtggtaattcattctctagctctagctctagtagtagcagtagtga 732
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 tgttgtctcatcaagtggtaattcattctctagctctagctctagtagtagcagtagtga 732

                                                                       
Query: 733 tattagtactggtttcccatttagtatcactagtggtagtgacaagaatttacaaatctc 792
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733 tattagtactggtttcccatttagtatcactagtggtagtgacaagaatttacaaatctc 792

                   
Query: 793 atcaactc 800
           ||||||||
Sbjct: 793 atcaactc 800


 Score =  163 bits (82), Expect = 5e-40
 Identities = 94/98 (95%)
 Strand = Plus / Plus

                                                                       
Query: 408 catcatcaactacaacatcaaaacaaacaacaaccataacaacatcaggtccatcctcaa 467
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 810 catcatcaactacaacatcaaaacaaaccacaaccataacaacatcaggtccatcctcaa 869

                                                 
Query: 468 ctgttgtctcatcaggtggtaatacattctctacctct 505
           |||||||||||||| |||||||| ||||||||| ||||
Sbjct: 870 ctgttgtctcatcaagtggtaattcattctctagctct 907


 Score =  155 bits (78), Expect = 1e-37
 Identities = 116/128 (90%), Gaps = 3/128 (2%)
 Strand = Plus / Plus

                                                                       
Query: 673 tgttgtctcatcaagtggtaattcattctctagctctagctctagtagtagcagtagtga 732
           ||||||||||||| |||||||| ||||||||| |||| |   ||||||||||||| ||| 
Sbjct: 469 tgttgtctcatcaggtggtaatacattctctacctctgg---tagtagtagcagtggtgg 525

                                                                       
Query: 733 tattagtactggtttcccatttagtatcactagtggtagtgacaagaatttacaaatctc 792
           |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 526 tattagtactggttccccatttagtatcactagtggtagtgataagaatttacaaatctc 585

                   
Query: 793 atcaactc 800
           || |||||
Sbjct: 586 atgaactc 593


 Score =  133 bits (67), Expect = 4e-31
 Identities = 70/71 (98%)
 Strand = Plus / Plus

                                                                       
Query: 856 aggtccatcctcaactgttgtctcatcaagtggtaattcattctctagctctagctctag 915
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 aggtccatcctcaactgttgtctcatcaagtggtaattcattctctagctctagctctag 717

                      
Query: 916 tagtagtagta 926
           |||||| ||||
Sbjct: 718 tagtagcagta 728


 Score =  103 bits (52), Expect = 4e-22
 Identities = 55/56 (98%)
 Strand = Plus / Plus

                                                                   
Query: 673 tgttgtctcatcaagtggtaattcattctctagctctagctctagtagtagcagta 728
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 871 tgttgtctcatcaagtggtaattcattctctagctctagctctagtagtagtagta 926


 Score = 79.8 bits (40), Expect = 6e-15
 Identities = 49/52 (94%)
 Strand = Plus / Plus

                                                               
Query: 856 aggtccatcctcaactgttgtctcatcaagtggtaattcattctctagctct 907
           |||||||||||||||||||||||||||| |||||||| ||||||||| ||||
Sbjct: 454 aggtccatcctcaactgttgtctcatcaggtggtaatacattctctacctct 505


 Score = 44.1 bits (22), Expect = 3e-04
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 736 tagtactggtttcccatttagtatcactagtggtagtg 773
           |||||||||||||||||  ||||| || ||||||||||
Sbjct: 922 tagtactggtttcccatcaagtattaccagtggtagtg 959


 Score = 44.1 bits (22), Expect = 3e-04
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 922 tagtactggtttcccatcaagtattaccagtggtagtg 959
           |||||||||||||||||  ||||| || ||||||||||
Sbjct: 736 tagtactggtttcccatttagtatcactagtggtagtg 773


 Score = 36.2 bits (18), Expect = 0.076
 Identities = 33/38 (86%)
 Strand = Plus / Plus

                                                 
Query: 529 tagtactggttccccatttagtatcactagtggtagtg 566
           ||||||||||| |||||  ||||| || ||||||||||
Sbjct: 922 tagtactggtttcccatcaagtattaccagtggtagtg 959


 Score = 36.2 bits (18), Expect = 0.076
 Identities = 33/38 (86%)
 Strand = Plus / Plus

                                                 
Query: 922 tagtactggtttcccatcaagtattaccagtggtagtg 959
           ||||||||||| |||||  ||||| || ||||||||||
Sbjct: 529 tagtactggttccccatttagtatcactagtggtagtg 566


>Contig-U01366-1 (Contig-U01366-1Q) /CSM_Contig/Contig-U01366-1Q.Seq.d
          Length = 634

 Score = 44.1 bits (22), Expect = 3e-04
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 404 tcatcatcatcaactacaacatcaaaacaaacaacaac 441
           |||||||||||||| |||||||||| |  |||||||||
Sbjct: 380 tcatcatcatcaacaacaacatcaacaacaacaacaac 417


>Contig-U11010-1 (Contig-U11010-1Q) /CSM_Contig/Contig-U11010-1Q.Seq.d
          Length = 1379

 Score = 42.1 bits (21), Expect = 0.001
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 404  tcatcatcatcaactacaaca 424
            |||||||||||||||||||||
Sbjct: 1247 tcatcatcatcaactacaaca 1267


  Database: CSM
    Posted date:  Jun 9, 2004  7:35 PM
  Number of letters in database: 5,674,871
  Number of sequences in database:  6905
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 25,509
Number of Sequences: 6905
Number of extensions: 25509
Number of successful extensions: 4569
Number of sequences better than 10.0: 677
length of query: 1075
length of database: 5,674,871
effective HSP length: 16
effective length of query: 1059
effective length of database: 5,564,391
effective search space: 5892690069
effective search space used: 5892690069
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2009. 6.14
Homology vs DNA 
Query= Contig-U04256-1 (Contig-U04256-1Q) /CSM_Contig/Contig-U04256-1Q.Seq.d
         (1075 letters)

Database: ddbj_A
           102,105,510 sequences; 101,790,757,118 total letters

Searching..................................................done

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(BJ412374) Dictyostelium discoideum cDNA clone:ddv8n01, 5' e...   737   0.0    3
(BJ409883) Dictyostelium discoideum cDNA clone:ddv10l07, 5' ...   706   0.0    3
(BJ430660) Dictyostelium discoideum cDNA clone:ddv8n01, 3' e...   272   0.0    3
(BJ427999) Dictyostelium discoideum cDNA clone:ddv10l07, 3' ...   307   e-137  2
(AU053658) Dictyostelium discoideum slug cDNA, clone SLJ343.      307   5e-79  1
(CR936846) Zebrafish DNA sequence from clone DKEY-20N3 in li...    42   4e-07  6
(AC177063) Strongylocentrotus purpuratus clone R3-4004H10, W...    40   4e-04  6
(EC319940) EMBRYOF088886F18 POSSUM_01-POSSUM-C-EMBRYO-2KB Tr...    42   7e-04  3
(EJ898413) 1093018476973 Global-Ocean-Sampling_GS-30-02-01-1...    34   0.001  3
(CU633611) Zebrafish DNA sequence from clone CH211-128J1 in ...    34   0.004  7
(FE824648) CCAG38481.g1 CCAG Petrolisthes cinctipes heart, g...    36   0.005  3
(DX871512) ZMMBLf0001F18.f ZMMBLf Zea mays genomic clone ZMM...    32   0.007  4
(ER071506) 1095521777216 Global-Ocean-Sampling_GS-33-01-01-1...    38   0.008  3
(ER262987) 1095527053505 Global-Ocean-Sampling_GS-33-01-01-1...    38   0.008  3
(ER098727) 1095521889033 Global-Ocean-Sampling_GS-33-01-01-1...    38   0.008  3
(AC117072) Dictyostelium discoideum chromosome 2 map 3879572...    34   0.010  11
(CW983383) KBrH008L12F KBrH, Brassica rapa HindIII BAC libra...    50   0.011  2
(EJ710957) 1092956074960 Global-Ocean-Sampling_GS-30-02-01-1...    38   0.011  3
(EU094835) Humulus lupulus clone ACC2-E14-4 microsatellite s...    40   0.017  3
(CZ338619) ZMMBF0106D16r ZMMBF Zea mays genomic clone ZMMBF0...    38   0.018  3
(FE791934) CCAG18437.g1 CCAG Petrolisthes cinctipes heart, g...    38   0.019  3
(ET322606) S0223N05_T7 CHORI-214 Salmo salar genomic clone S...    38   0.025  3
(ER580005) 1093015832306 Global-Ocean-Sampling_GS-36-01-01-2...    32   0.028  4
(AG983552) Hemicentrotus pulcherrimus BAC clone: BUB1-04I05_...    34   0.029  3
(AG985915) Hemicentrotus pulcherrimus BAC clone: BUB1-08C17_...    34   0.031  3
(AG991413) Hemicentrotus pulcherrimus BAC clone: BUB1-16B09_...    38   0.034  3
(CU076051) Zebrafish DNA sequence from clone CH211-87B14 in ...    38   0.035  6
(FM167773) Oryzias latipes EST, clone M025--F2_006.                32   0.040  4
(BX121516) Danio rerio genomic clone DKEY-59M18, genomic sur...    38   0.050  3
(ER031316) 1095521461915 Global-Ocean-Sampling_GS-33-01-01-1...    46   0.052  2
(EY384726) CAXA5308.rev CAXA Helobdella robusta Subtracted L...    36   0.056  3
(AM448578) Vitis vinifera contig VV78X195439.25, whole genom...    40   0.064  3
(ER557649) 1093015723964 Global-Ocean-Sampling_GS-36-01-01-2...    34   0.064  3
(FE747721) CAYC4507.g1 CAYC Petrolisthes cinctipes heart, ne...    36   0.067  3
(EY326280) CAWY1149.rev CAWY Helobdella robusta Subtracted E...    36   0.077  3
(DJ387376) Diagnosis of Diseases Associated with Apoptosis.        36   0.084  5
(AX281284) Sequence 26 from Patent WO0177164.                      36   0.084  5
(AC176595) Strongylocentrotus purpuratus clone R3-3077O12, W...    40   0.087  7
(BX072573) Zebrafish DNA sequence from clone DKEY-16I6.            42   0.089  5
(DH475704) Monosiga ovata DNA, fosmid clone: MOF-024N13, gen...    32   0.091  4
(AC184644) Strongylocentrotus purpuratus clone R3-3043C18, W...    40   0.10   6
(AC177993) Strongylocentrotus purpuratus clone R3-3051M15, W...    40   0.10   2
(AC184511) Strongylocentrotus purpuratus clone R3-3121C2, WO...    40   0.11   2
(FG951329) MA_93-11_08224 Mature embryo cDNA Library of 93-1...    32   0.11   3
(AC176519) Strongylocentrotus purpuratus clone R3-3075E10, W...    40   0.11   2
(EJ944189) 1093018903947 Global-Ocean-Sampling_GS-30-02-01-1...    32   0.12   3
(DH473172) Monosiga ovata DNA, fosmid clone: MOF-020I16, gen...    32   0.14   3
(DX993429) CHORI103-15B19.TV.1 CHORI103 Schistosoma mansoni ...    32   0.14   4
(AC116957) Dictyostelium discoideum chromosome 2 map 1685067...    36   0.15   13
(AC184114) Zea mays chromosome 4 clone ZMMBBb-623M16; ZMMBBb...    46   0.15   3
(BZ423698) id52c10.g1 WGS-SbicolorF (DH5a methyl filtered) S...    32   0.15   3
(AC151709) Medicago truncatula clone mth2-31g22, complete se...    40   0.16   4
(CC940976) 01S0630-08B1-F11 UniformMu MuTAIL Library Zea may...    32   0.16   3
(BX908786) Zebrafish DNA sequence from clone CH211-13O8 in l...    38   0.16   8
(DH609496) Rattus norvegicus DNA, BAC clone: RNB1-138F16, 5'...    42   0.16   2
(AG529743) Mus musculus molossinus DNA, clone:MSMg01-439F24....    44   0.17   2
(CT954285) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    50   0.18   1
(CT827825) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    50   0.18   1
(AC232587) Brassica rapa subsp. pekinensis clone KBrB027J02,...    50   0.18   1
(AC201133) Strongylocentrotus purpuratus clone R3-14A9, WORK...    50   0.18   1
(AC180153) Strongylocentrotus purpuratus clone R3-4005H13, W...    50   0.18   1
(AC179914) Strongylocentrotus purpuratus clone R3-1003F11, W...    50   0.18   1
(CG957691) MBEBG10TF mth2 Medicago truncatula genomic clone ...    50   0.18   1
(AC149966) Strongylocentrotus purpuratus clone R3-32B1, WORK...    38   0.18   6
(FG360439) RM_G_03115 Eriocheir sinensis hepatopancreas cDNA...    36   0.18   3
(FP017276) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    38   0.19   5
(FE809377) CCAG28565.b1 CCAG Petrolisthes cinctipes heart, g...    32   0.19   3
(EJ959569) 1093018995206 Global-Ocean-Sampling_GS-30-02-01-1...    30   0.20   4
(BZ333772) hx72h02.g1 WGS-SbicolorF (JM107 adapted methyl fi...    32   0.21   3
(DE941853) Macropus eugenii DNA, BAC clone: MEB1-136J11_F, 5...    32   0.21   3
(BZ775994) ih97d08.g1 WGS-ZmaysF (DH5a methyl filtered) Zea ...    32   0.23   3
(AL592077) Zebrafish DNA sequence from clone XX-DZ35C18.           40   0.24   4
(AC212755) Zea mays chromosome 4 clone CH201-149O13; ZMMBBc0...    46   0.24   3
(EY300745) CAWX15190.rev CAWX Helobdella robusta Primary Ear...    32   0.25   4
(EK827449) 1093017273418 Global-Ocean-Sampling_GS-33-01-01-1...    34   0.25   3
(FE809378) CCAG28565.g1 CCAG Petrolisthes cinctipes heart, g...    32   0.28   3
(GE168372) CAHP9386.fwd CAHP Emiliania huxleyi CCMP1516 day ...    34   0.29   3
(AC176918) Strongylocentrotus purpuratus clone R3-33D5, WORK...    38   0.29   7
(AB149085) Homo sapiens DNA, STS on chromosome 6, D6S1610i, ...    36   0.29   3
(DJ457850) Method for analysing genome using microsatellite ...    36   0.29   3
(AL444293) Fugu rubripes GSS sequence, clone 217A13gB11.           32   0.31   3
(DH468482) Monosiga ovata DNA, fosmid clone: MOF-012D08, gen...    32   0.33   3
(DX485596) Cpl27340 Papaya Genomic DNA BAC Library Carica pa...    32   0.35   4
(AC175897) Strongylocentrotus purpuratus clone R3-15A12, WOR...    38   0.36   7
(EK596007) 1092343789014 Global-Ocean-Sampling_GS-33-01-01-1...    32   0.37   3
(EK979969) 1095521090885 Global-Ocean-Sampling_GS-33-01-01-1...    32   0.38   3
(AC116922) Dictyostelium discoideum chromosome 2 map 6061442...    32   0.41   7
(AC180568) Strongylocentrotus purpuratus clone R3-3094P13, W...    38   0.41   6
(BJ321944) Triticum aestivum cDNA clone:whyf23b02, 3' end, s...    36   0.42   2
(DX103290) AU_BAC035A2G06_T7 CHORI212 Ictalurus punctatus ge...    32   0.42   3
(AL004803) F.rubripes GSS sequence, clone 125H09aE8.               32   0.42   3
(EK592321) 1092343708125 Global-Ocean-Sampling_GS-33-01-01-1...    34   0.43   3
(AM461693) Vitis vinifera contig VV78X185357.4, whole genome...    40   0.44   3
(FE427676) CAOP1824.fwd CAOP Selaginella moellendorffii mixe...    44   0.47   2
(EK501823) 1095505217142 Global-Ocean-Sampling_GS-32-01-01-1...    36   0.49   2
(CC941189) 01S0745-04B1-B10 UniformMu MuTAIL Library Zea may...    32   0.50   3
(DQ379469) Concholepas concholepas microsatellite Cc1H2 sequ...    40   0.51   2
(AC187666) Microcebus murinus clone CH257-513H19, WORKING DR...    38   0.52   5
(EJ507871) 1095407013364 Global-Ocean-Sampling_GS-28-01-01-1...    36   0.52   2
(BJ319887) Triticum aestivum cDNA clone:whyf17j02, 3' end, s...    36   0.53   2
(CJ514338) Triticum aestivum cDNA clone rwhfl43l15 3', Y.Ogi...    36   0.54   2
(BJ309050) Triticum aestivum cDNA clone:whyd18i22, 3' end, s...    36   0.54   2
(FE438107) CAOP7846.rev CAOP Selaginella moellendorffii mixe...    44   0.55   2
(CW265099) 104_734_11231675_116_35257_044 Sorghum methylatio...    36   0.55   2
(DN838123) SmoC-1_02_I05_T7 Selaginella moellendorffii cDNA ...    44   0.55   2
(BJ266335) Triticum aestivum cDNA clone:whh26b15, 3' end, si...    36   0.55   2
(CW242417) 104_702_11219332_148_37561_014 Sorghum methylatio...    36   0.55   2
(CW342255) 104_844_11486775_148_36178_064 Sorghum methylatio...    36   0.56   2
(CW342254) 104_844_11486775_116_36177_064 Sorghum methylatio...    36   0.58   2
(CW235244) 104_690_11214878_148_37412_055 Sorghum methylatio...    36   0.58   2
(FL759165) CCGC8662.b1 CCGC Panicum virgatum early floral bu...    36   0.59   2
(AL444251) Fugu rubripes GSS sequence, clone 217A13fH6.            32   0.59   3
(AM447853) Vitis vinifera contig VV78X083454.9, whole genome...    40   0.60   3
(FE427485) CAOP1715.rev CAOP Selaginella moellendorffii mixe...    44   0.60   2
(FE475521) CAOS5486.rev CAOS Selaginella moellendorffii mixe...    44   0.61   2
(BH470331) BOHCF32TF BOHC Brassica oleracea genomic clone BO...    44   0.61   2
(AZ974347) 2M0248F23R Mouse 10kb plasmid UUGC2M library Mus ...    36   0.61   2
(AG591555) Mus musculus molossinus DNA, clone:MSMg01-520I19....    36   0.62   2
(AC178239) Strongylocentrotus purpuratus clone R3-3086F16, W...    36   0.62   7
(FE437202) CAOP7336.fwd CAOP Selaginella moellendorffii mixe...    44   0.63   2
(EB622868) AGENCOURT_54979249 D. mojavensis EST Drosophila m...    36   0.63   2
(DE422399) Bombyx mori genomic DNA, Fosmid clone:GBMFno3_h04...    32   0.63   3
(FD388828) 1106121093547 Cryptosporidium muris (strain RN66)...    34   0.67   3
(FE437201) CAOP7336.rev CAOP Selaginella moellendorffii mixe...    44   0.68   2
(BH872051) hn38e04.b1 WGS-ZmaysF (JM107 adapted methyl filte...    32   0.68   3
(EB625302) AGENCOURT_54969028 D. mojavensis EST Drosophila m...    36   0.69   2
(EY360188) CAWZ690.fwd CAWZ Helobdella robusta Primary Late ...    42   0.70   2
(AC204269) Zea mays chromosome 4 clone CH201-530P20; ZMMBBc0...    38   0.71   4
(CR792426) Zebrafish DNA sequence from clone DKEY-23A11 in l...    48   0.71   1
(BV644410) S217P6709RA4.T0 Noemie Pan troglodytes troglodyte...    48   0.71   1
(Z16827) H. sapiens (D3S1285) DNA segment containing (CA) re...    48   0.71   1
(AC121766) Homo sapiens chromosome 3 clone RP11-245G23, comp...    48   0.71   1
(CT737231) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    48   0.71   1
(AC179314) Strongylocentrotus purpuratus clone R3-1102P16, W...    48   0.71   1
(AC178980) Strongylocentrotus purpuratus clone R3-3122F12, W...    48   0.71   1
(AC015475) Homo sapiens clone RP11-13P6, WORKING DRAFT SEQUE...    48   0.71   1
(CU763246) A BAC library has been constructed from PN40024 g...    48   0.71   1
(DV185647) CT051_G11_CT051_3700_91.ab1 C. tentans tissue cul...    48   0.71   1
(AC206537) Pongo abelii BAC clone CH276-59D20 from chromosom...    38   0.71   4
(CJ518286) Triticum aestivum cDNA clone rwhcs10e21 3', Y.Ogi...    36   0.71   2
(AF397467) Ictalurus punctatus novel immune-type receptor 2 ...    36   0.72   3
(CC158347) if92h03.g1 WGS-ZmaysF (DH5a methyl filtered) Zea ...    34   0.72   3
(AC181907) Strongylocentrotus purpuratus clone R3-1012P21, W...    36   0.74   6
(AC116550) Dictyostelium discoideum chromosome 2 map 375056-...    34   0.76   4
(GH635767) 7D10F Artemia diapause-destined oocytes Library A...    36   0.77   3
(EK794697) 1093017173501 Global-Ocean-Sampling_GS-33-01-01-1...    32   0.77   3
(AI618883) SWOv3MCAM27E12SK Onchocerca volvulus molting L3 l...    34   0.78   3
(DQ993217) Haliotis midae microsatellite HmLCS18 sequence.         42   0.79   2
(BH784725) fzmb013f029a11k0 fzmb filtered library Zea mays g...    30   0.80   3
(ET283747) S0083B22_T7 CHORI-214 Salmo salar genomic clone S...    34   0.80   3
(AC176415) Strongylocentrotus purpuratus clone R3-12I22, WOR...    44   0.80   4
(AC168464) Strongylocentrotus purpuratus clone R3-35F23, WOR...    40   0.86   4
(ET242478) S0240G08_SP6 CHORI-214 Salmo salar genomic clone ...    34   0.86   3
(AM458757) Vitis vinifera contig VV78X233605.3, whole genome...    40   0.87   2
(BZ614791) ig46f04.g1 WGS-ZmaysF (DH5a methyl filtered) Zea ...    32   0.87   3
(AC176529) Strongylocentrotus purpuratus clone R3-3075J08, W...    40   0.87   3
(BZ317822) hx35f04.g1 WGS-ZmaysF (JM107 adapted methyl filte...    32   0.89   3
(BH879665) ht47h12.g1 WGS-ZmaysF (JM107 adapted methyl filte...    32   0.96   3
(EY294030) CAWX11450.rev CAWX Helobdella robusta Primary Ear...    32   0.96   3
(AF413054) Zea mays CAG and TAG long trinucleotide repeat.         32   0.96   3
(EY309975) CAWX21892.rev CAWX Helobdella robusta Primary Ear...    32   0.96   3
(ER279995) 1095527204976 Global-Ocean-Sampling_GS-33-01-01-1...    32   0.99   3
(ET248443) S0123F06_SP6 CHORI-214 Salmo salar genomic clone ...    34   1.00   3
(DX465580) Cpl07433 Papaya Genomic DNA BAC Library Carica pa...    34   1.00   3
(AC177405) Strongylocentrotus purpuratus clone R3-53M22, WOR...    42   1.00   6
(AC184098) Populus trichocarpa clone Pop1-90I7, complete seq...    44   1.0    2
(EJ683298) 1092955151863 Global-Ocean-Sampling_GS-30-02-01-1...    32   1.0    3
(DE946991) Macropus eugenii DNA, BAC clone: MEB1-143J05_R, 3...    32   1.0    3
(GD194833) G1045P374RJ7.T1 Aplysia californica Pooled Normal...    30   1.0    4
(AL444948) Fugu rubripes GSS sequence, clone 264E22aD6.            32   1.1    3
(ET286095) S0240I06_SP6 CHORI-214 Salmo salar genomic clone ...    34   1.1    3
(DE068556) Oryzias latipes DNA, clone: ola1-165N02.F, genomi...    32   1.1    3
(ER132765) 1095522083116 Global-Ocean-Sampling_GS-33-01-01-1...    32   1.1    3
(EY306348) CAWX19867.rev CAWX Helobdella robusta Primary Ear...    32   1.2    3
(AM426254) Vitis vinifera contig VV78X111506.4, whole genome...    38   1.2    4
(AL444793) Fugu rubripes GSS sequence, clone 263K15aB2.            32   1.2    3
(EK541789) 1095516062371 Global-Ocean-Sampling_GS-32-01-01-1...    32   1.2    3
(EJ937845) 1093018848328 Global-Ocean-Sampling_GS-30-02-01-1...    32   1.2    3
(EY298930) CAWX14182.fwd CAWX Helobdella robusta Primary Ear...    32   1.2    3
(EK927458) 1093018256581 Global-Ocean-Sampling_GS-33-01-01-1...    32   1.2    3
(DH472648) Monosiga ovata DNA, fosmid clone: MOF-019K09, gen...    34   1.2    3
(AC178886) Strongylocentrotus purpuratus clone R3-27K10, WOR...    36   1.3    5
(DE263479) Oryzias latipes DNA, clone: ola1-152L03.R, genomi...    32   1.3    3
(EY302541) CAWX16212.fwd CAWX Helobdella robusta Primary Ear...    32   1.3    3
(DH477812) Monosiga ovata DNA, fosmid clone: MOF-028K12, gen...    32   1.3    3
(ER136469) 1095522095359 Global-Ocean-Sampling_GS-33-01-01-1...    32   1.3    3
(EY303664) CAWX16836.fwd CAWX Helobdella robusta Primary Ear...    32   1.3    3
(BX901969) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    38   1.4    5
(FH147422) CHO_OF3003xe20r1.ab1 CHO_OF3 Nicotiana tabacum ge...    32   1.4    3
(DX101290) AU_BAC029A2G07_T7 CHORI212 Ictalurus punctatus ge...    32   1.4    3
(AC175874) Strongylocentrotus purpuratus clone R3-3043B17, W...    38   1.4    6
(ER239961) 1095526074035 Global-Ocean-Sampling_GS-33-01-01-1...    32   1.4    3
(EE274771) PMAO-aac70f02.b1 Lamprey_EST_Embryo Petromyzon ma...    32   1.4    4
(AC146572) Medicago truncatula clone mth2-104c10, complete s...    42   1.4    4
(AC173785) Bos taurus clone CH240-392B16, WORKING DRAFT SEQU...    34   1.4    2
(AC189270) Brassica rapa subsp. pekinensis clone KBrB023F24,...    34   1.4    2
(DE843016) Macropus eugenii DNA, BAC clone: MEB1-003F15_R, 3...    34   1.5    3
(EY320294) CAWX7315.rev CAWX Helobdella robusta Primary Earl...    32   1.5    3
(EY297311) CAWX13295.fwd CAWX Helobdella robusta Primary Ear...    32   1.5    3
(AL018519) F.rubripes GSS sequence, clone 154E17aC12.              32   1.5    3
(ER121564) 1095522041568 Global-Ocean-Sampling_GS-33-01-01-1...    32   1.6    3
(AF000197) Caenorhabditis elegans cosmid T21G5, complete seq...    34   1.6    2
(AZ201596) SP_0053_A2_H03_T7A Strongylocentrotus purpuratus,...    32   1.6    3
(EK775991) 1093017129373 Global-Ocean-Sampling_GS-33-01-01-1...    32   1.6    3
(AC181552) Strongylocentrotus purpuratus clone R3-1109N20, W...    42   1.6    5
(AY588381) Humulus lupulus clone HlCAG7 microsatellite seque...    32   1.6    3
(DQ137764) Schistosoma mansoni clone 54TAGA microsatellite s...    32   1.8    3
(FG982478) hem_0013_E08 Chinese mitten crab haemocytes cDNA ...    34   1.8    3
(BZ316563) ia73f02.b1 WGS-ZmaysF (JM107 adapted methyl filte...    32   1.8    3
(AL444858) Fugu rubripes GSS sequence, clone 263K15bD8.            32   1.8    3
(EH087793) PMEA526TR Perkinsus marinus large insert cDNA lib...    36   1.8    3
(DV783784) HW_liver_67_050824_F08 Bos taurus CF-24-HW liver ...    34   1.9    2
(AL444958) Fugu rubripes GSS sequence, clone 264E22cA9.            32   1.9    3
(AJ611185) Triticum turgidum EST, clone 04429R.                    36   1.9    2
(EY320295) CAWX7315.fwd CAWX Helobdella robusta Primary Earl...    32   1.9    3
(DX074615) KBrB085F12F KBrB, Brassica rapa BamHI BAC library...    34   1.9    2
(BJ769685) Caenorhabditis elegans cDNA clone:yk1697c12 : 5' ...    34   1.9    2
(AC179685) Strongylocentrotus purpuratus clone R3-1021M20, W...    42   2.0    8
(DQ137729) Schistosoma mansoni clone 08TAGA microsatellite s...    32   2.0    3
(BB412784) Mus musculus 7 days embryo cDNA, RIKEN full-lengt...    36   2.0    2
(AC178577) Strongylocentrotus purpuratus clone R3-3022K10, W...    38   2.1    5
(DQ137738) Schistosoma mansoni clone 19TAGA microsatellite s...    32   2.1    3
(CD899832) G174.113L07R011120 G174 Triticum aestivum cDNA cl...    36   2.1    2
(AC179368) Strongylocentrotus purpuratus clone R3-1101P9, WO...    34   2.1    4
(BZ775931) ih96h06.g1 WGS-ZmaysF (DH5a methyl filtered) Zea ...    32   2.1    3
(CL863099) OR_CBa0095M09.r OR_CBa Oryza rufipogon genomic cl...    38   2.1    2
(CE835380) tigr-gss-dog-17000332394196 Dog Library Canis lup...    40   2.2    2
(FE815401) CCAG32268.g1 CCAG Petrolisthes cinctipes heart, g...    42   2.2    2
(AM619128) Entamoeba invadens IP1 GSS, clone inv117e05.p1k.        42   2.2    2
(BX004990) Zebrafish DNA sequence from clone DKEY-12H12.           36   2.2    6
(DE850278) Macropus eugenii DNA, BAC clone: MEB1-013C19_R, 3...    32   2.2    3
(DH495111) Monosiga ovata DNA, fosmid clone: MOF-058N09, gen...    32   2.3    3
(DX501325) Cpl43288 Papaya Genomic DNA BAC Library Carica pa...    32   2.3    3
(AL844507) Plasmodium falciparum chromosome 8.                     34   2.3    10
(AW257775) SWOv3MCAM31G08SK Onchocerca volvulus molting L3 l...    34   2.3    3
(CR848053) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    42   2.4    7
(AZ149014) SP_0020_B1_D12_T7 Strongylocentrotus purpuratus, ...    32   2.4    3
(CZ276957) ZMMBF0060D11f ZMMBF Zea mays genomic clone ZMMBF0...    32   2.4    3
(GH196752) FCMI-PM-508 WSSV infected Penaeus monodon cDNA li...    32   2.4    3
(DH478859) Monosiga ovata DNA, fosmid clone: MOF-030I16, gen...    32   2.4    3
(EY354930) CAWZ3523.fwd CAWZ Helobdella robusta Primary Late...    32   2.4    3
(AC181320) Strongylocentrotus purpuratus clone R3-115D17, WO...    36   2.4    5
(AC155282) Medicago truncatula chromosome 2 clone mth2-63e12...    32   2.4    8
(EY300322) CAWX14957.rev CAWX Helobdella robusta Primary Ear...    42   2.5    2
(DE859155) Macropus eugenii DNA, BAC clone: MEB1-025B15_F, 5...    32   2.5    3
(ET372133) S0137B11_T7 CHORI-214 Salmo salar genomic clone S...    32   2.6    3
(AC181363) Strongylocentrotus purpuratus clone R3-112K1, WOR...    36   2.6    6
(EK441706) 1092214962404 Global-Ocean-Sampling_GS-32-01-01-1...    38   2.6    2
(FH921119) CHO_NF2007xl07f1.ab1 CHO_NF2 Nicotiana tabacum ge...    32   2.6    3
(DX465867) Cpl07731 Papaya Genomic DNA BAC Library Carica pa...    30   2.6    4
(AF033037) Plasmodium falciparum merozoite surface protein 4...    36   2.7    3
(EJ763302) 1092963155815 Global-Ocean-Sampling_GS-30-02-01-1...    32   2.7    3
(AT002044) Antheraea yamamai posterior silkgland EST clone A...    32   2.7    3
(EK441630) 1092214954726 Global-Ocean-Sampling_GS-32-01-01-1...    38   2.7    2
(AC168495) Strongylocentrotus purpuratus clone R3-3117E17, W...    36   2.7    7
(EK988987) 1095521161164 Global-Ocean-Sampling_GS-33-01-01-1...    38   2.8    2
(AL444288) Fugu rubripes GSS sequence, clone 217A13gF11.           32   2.8    3
(DE867693) Macropus eugenii DNA, BAC clone: MEB1-036I07_F, 5...    32   2.8    3
(CR384092) Zebrafish DNA sequence from clone DKEY-43A9 in li...    46   2.8    1
(FM992690) Candida dubliniensis CD36 chromosome 3, complete ...    46   2.8    1
(AF262043) Arabidopsis thaliana BAC T26D3.                         46   2.8    1
(EA102805) Sequence 188 from patent US 7195870.                    46   2.8    1
(AX346887) Sequence 1958 from Patent WO0200928.                    46   2.8    1
(AX323788) Sequence 276 from Patent WO0192565.                     46   2.8    1
(AX278025) Sequence 188 from Patent WO0177375.                     46   2.8    1
(GM996136) Sequence 276 from Patent EP2014776.                     46   2.8    1
(AC148779) Salmo salar clone CH214-455L21, WORKING DRAFT SEQ...    46   2.8    1
(CR940348) Theileria annulata genomic DNA chromosome 2.            46   2.8    1
(AC231156) Bos taurus clone CH240-97C15, WORKING DRAFT SEQUE...    46   2.8    1
(AC201789) Zea mays chromosome 6 clone CH201-87D9; ZMMBBc008...    46   2.8    1
(AC168742) Strongylocentrotus purpuratus clone R3-3010D11, W...    46   2.8    1
(AC168737) Strongylocentrotus purpuratus clone R3-3010F15, W...    46   2.8    1
(DU334470) 1098312085666 CHORI-243 Ovis aries genomic clone ...    46   2.8    1
(CZ538007) SRAA-aad17a06.g1 Strongyloides ratti whole genome...    46   2.8    1
(CZ249780) AIAA-aac59e24.b1 Ancylostoma caninum whole genome...    46   2.8    1
(CR810564) GR0AAA34AD03FM1 INRA BAC Bos taurus genomic clone...    46   2.8    1
(CL493288) SAIL_576_A10.v1 SAIL Collection Arabidopsis thali...    46   2.8    1
(BH758854) SALK_031456.55.25.x Arabidopsis thaliana TDNA ins...    46   2.8    1
(BH758849) SALK_031446.52.85.x Arabidopsis thaliana TDNA ins...    46   2.8    1
(EG824370) EST_ssal_evd_25913 ssalevd thymus Salmo salar cDN...    46   2.8    1
(CU556551) Spc_22YN12 cDNA clone of Developmental Stages Lib...    46   2.8    1
(CU556522) Spc_22YP12 cDNA clone of Developmental Stages Lib...    46   2.8    1
(EY344778) CAWZ13482.fwd CAWZ Helobdella robusta Primary Lat...    46   2.8    1
(AC231677) Solanum tuberosum chromosome 11 clone RH089H13, *...    42   2.8    4
(FG983071) hem_0020_A06 Chinese mitten crab haemocytes cDNA ...    34   2.8    3
(DH474758) Monosiga ovata DNA, fosmid clone: MOF-023E19, gen...    32   2.8    3
(DE637889) Bombyx mori genomic DNA, Fosmid clone:GBMFno384_i...    30   2.8    3
(ER052916) 1095521721229 Global-Ocean-Sampling_GS-33-01-01-1...    32   2.8    3
(AC201016) Strongylocentrotus purpuratus clone R3-12H10, WOR...    36   3.0    4
(CC037692) 3591_1_89_1_E07.2EL_x_1 3591 - RescueMu Grid P Ze...    36   3.0    2
(DH503003) Monosiga ovata DNA, fosmid clone: MOF-072H20, gen...    32   3.0    3
(EB762964) LM9-257R LM Leptosphaeria maculans cDNA, mRNA seq...    30   3.1    3
(ER100365) 1095521895052 Global-Ocean-Sampling_GS-33-01-01-1...    32   3.1    3
(DQ137750) Schistosoma mansoni clone 37TAGA microsatellite s...    32   3.1    3
(EY347887) CAWZ1620.rev CAWZ Helobdella robusta Primary Late...    32   3.1    3
(BB996894) Ilyoplax pusilla mRNA, clone: ARN01A01NGRM0006_H1...    32   3.1    3
(AZ179651) SP_0165_B2_F07_T7A Strongylocentrotus purpuratus,...    32   3.1    3
(BV724361) 00.201275.050B08 Xenopus tropicalis (Nigerian str...    32   3.2    3
(FD154202) CBZC22828.b1 CBZC: Normalized blue catfish cDNA l...    32   3.2    3
(CU459157) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    38   3.3    5
(DQ137773) Schistosoma mansoni clone 64TAGA microsatellite s...    32   3.3    3
(AC184501) Strongylocentrotus purpuratus clone R3-16H10, WOR...    40   3.3    7
(DH434320) Macropus eugenii DNA with T3 primer, fosmid clone...    32   3.4    3
(DH449019) Macropus eugenii DNA with T3 primer, fosmid clone...    32   3.4    3
(ER206186) 1095523098506 Global-Ocean-Sampling_GS-33-01-01-1...    32   3.5    3
(ET399933) S0083K23_T7 CHORI-214 Salmo salar genomic clone S...    32   3.5    3
(DQ137723) Schistosoma mansoni clone 01TAGA microsatellite s...    32   3.5    3
(BH777606) fzmb013f029a11f0 fzmb filtered library Zea mays g...    30   3.5    3
(DQ137795) Schistosoma mansoni clone 94TAGA microsatellite s...    32   3.5    3
(CP001161) Buchnera aphidicola str. 5A (Acyrthosiphon pisum)...    36   3.6    7
(DQ137743) Schistosoma mansoni clone 28TAGA microsatellite s...    32   3.6    3
(DQ137777) Schistosoma mansoni clone 69TAGA microsatellite s...    32   3.6    3
(DH498882) Monosiga ovata DNA, fosmid clone: MOF-065H10, gen...    32   3.6    3
(EK668103) 1092381300712 Global-Ocean-Sampling_GS-33-01-01-1...    32   3.7    3
(AL299119) Tetraodon nigroviridis genome survey sequence T7 ...    32   3.8    3
(EY328229) CAWY1421.fwd CAWY Helobdella robusta Subtracted E...    32   3.8    3
(EY345593) CAWZ14098.fwd CAWZ Helobdella robusta Primary Lat...    32   3.8    3
(AC145248) Didelphis virginiana clone LB3-23M10, WORKING DRA...    40   3.8    6
(ER116405) 1095522022974 Global-Ocean-Sampling_GS-33-01-01-1...    32   3.8    3
(DX476893) Cpl19131 Papaya Genomic DNA BAC Library Carica pa...    32   3.8    3
(EY389572) CAXA7919.fwd CAXA Helobdella robusta Subtracted L...    32   3.9    3
(GE772356) EST_ssal_rgf_841208 ssalrgf mixed_tissue full-len...    32   3.9    3
(AC179275) Strongylocentrotus purpuratus clone R3-45B19, WOR...    32   3.9    8
(DH449107) Macropus eugenii DNA with T3 primer, fosmid clone...    32   4.0    3
(EY303109) CAWX16533.rev CAWX Helobdella robusta Primary Ear...    32   4.1    3
(AC207115) Zea mays chromosome 5 clone CH201-373I12; ZMMBBc0...    38   4.1    5
(EY323662) CAWX9128.fwd CAWX Helobdella robusta Primary Earl...    34   4.1    3
(DE982626) Macropus eugenii DNA, BAC clone: MEB1-191O23_R, 3...    32   4.1    3
(AQ210649) HS_2225_B1_H09_MF CIT Approved Human Genomic Sper...    32   4.2    3
(FE772577) CCAG6719.b3 CCAG Petrolisthes cinctipes heart, gi...    32   4.2    3
(AC143340) Medicago truncatula clone mth2-7f4, complete sequ...    40   4.2    5
(EY385521) CAXA5732.rev CAXA Helobdella robusta Subtracted L...    32   4.2    3
(FE788378) CCAG16069.g1 CCAG Petrolisthes cinctipes heart, g...    32   4.2    3
(EK793708) 1093017171239 Global-Ocean-Sampling_GS-33-01-01-1...    30   4.2    3
(CC058419) ii55e06.b1 WGS-ZmaysF (DH5a methyl filtered) Zea ...    32   4.2    3
(AC178840) Strongylocentrotus purpuratus clone R3-26B22, WOR...    42   4.3    5
(DX489192) Cpl30984 Papaya Genomic DNA BAC Library Carica pa...    32   4.3    3
(BD061520) Genome DNA of symbiotic bacteria of aphid.              36   4.3    8
(AR409405) Sequence 1 from patent US 6632935.                      36   4.3    8
(BA000003) Buchnera aphidicola str. APS (Acyrthosiphon pisum...    36   4.3    8
(CP001158) Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisu...    36   4.3    8
(AC092555) Papio anubis clone RP41-97B18, WORKING DRAFT SEQU...    40   4.3    4
(EY332229) CAWY4726.rev CAWY Helobdella robusta Subtracted E...    32   4.4    3
(BZ375271) ie37f03.g1 WGS-ZmaysF (DH5a methyl filtered) Zea ...    32   4.4    3
(DH460692) Macropus eugenii DNA with T7 primer, fosmid clone...    32   4.5    3
(DH471852) Monosiga ovata DNA, fosmid clone: MOF-018D20, gen...    32   4.5    3
(DQ137755) Schistosoma mansoni clone 42TAGA microsatellite s...    32   4.5    3
(AC209766) Zea mays chromosome 3 clone CH201-123A20; ZMMBBc0...    34   4.6    6
(EK896652) 1093018157411 Global-Ocean-Sampling_GS-33-01-01-1...    32   4.6    3
(AC116989) Dictyostelium discoideum chromosome 2 map 4545040...    30   4.6    7
(EY360915) CAWZ7436.fwd CAWZ Helobdella robusta Primary Late...    32   4.6    3
(EJ259912) 1095349032188 Global-Ocean-Sampling_GS-27-01-01-1...    32   4.6    3
(ER323089) 1092344191039 Global-Ocean-Sampling_GS-34-01-01-1...    32   4.6    3
(AC117070) Dictyostelium discoideum chromosome 2 map 2097701...    36   4.7    10
(DE237892) Trifolium pratense DNA, clone:RCG34053.                 30   4.7    3
(EY311159) CAWX23315.fwd CAWX Helobdella robusta Primary Ear...    32   4.7    3
(DH450732) Macropus eugenii DNA with T7 primer, fosmid clone...    32   4.8    3
(AC116956) Dictyostelium discoideum chromosome 2 map 1418423...    34   4.8    9
(BZ278262) CH230-343N5.TV CHORI-230 Segment 2 Rattus norvegi...    34   4.9    3
(DH453624) Macropus eugenii DNA with T7 primer, fosmid clone...    32   4.9    3
(CR456684) Zebrafish DNA sequence from clone DKEY-46I8 in li...    40   4.9    7
(ED944993) OA_CBa0126E03.r OA_CBa Oryza australiensis genomi...    36   4.9    2
(EY317577) CAWX386.fwd CAWX Helobdella robusta Primary Early...    32   4.9    3
(BZ778520) ih02a01.b1 WGS-ZmaysF (DH5a methyl filtered) Zea ...    32   4.9    3
(DE920522) Macropus eugenii DNA, BAC clone: MEB1-107G17_F, 5...    32   4.9    3
(BZ422321) id52c10.b1 WGS-SbicolorF (DH5a methyl filtered) S...    32   4.9    3
(DE879943) Macropus eugenii DNA, BAC clone: MEB1-052M16_R, 3...    32   4.9    3
(FG359444) RM_G_02120 Eriocheir sinensis hepatopancreas cDNA...    36   5.0    2
(BX537338) Zebrafish DNA sequence from clone DKEY-258E8 in l...    32   5.1    2
(AC177399) Strongylocentrotus purpuratus clone R3-1031I17, W...    38   5.1    5
(AC129051) Rattus norvegicus clone CH230-89P7, *** SEQUENCIN...    32   5.1    2
(CR854984) Zebrafish DNA sequence from clone DKEY-62B6 in li...    32   5.2    2
(CD169498) MM1-0024P-M089-D12-U.B MM1-0024 Schistosoma manso...    32   5.2    3
(CR352231) Zebrafish DNA sequence from clone CH211-216G8 in ...    32   5.2    2
(BX537142) Zebrafish DNA sequence from clone CH211-271D10 in...    32   5.3    2
(AC111799) Rattus norvegicus clone CH230-203J20, *** SEQUENC...    36   5.3    5
(AP001006) Homo sapiens genomic DNA, chromosome 18 clone:RP1...    36   5.3    8
(BX088582) Zebrafish DNA sequence from clone CH211-188B17 in...    32   5.3    2
(AC184661) Strongylocentrotus purpuratus clone R3-1034K14, W...    34   5.3    2
(AC217644) Populus trichocarpa clone POP037-C20, complete se...    32   5.4    2
(AC168249) Strongylocentrotus purpuratus clone R3-1001J7, WO...    34   5.4    8
(AC099636) Mus musculus chromosome 19, clone RP24-149H13, co...    44   5.4    3
(DX042235) KBrB042I22R KBrB, Brassica rapa BamHI BAC library...    32   5.5    3
(BY910774) Cryptomeria japonica cDNA clone: CMFL043_D17, 3'e...    38   5.5    2
(BY899069) Cryptomeria japonica cDNA clone: CMFL007_N02, 3'e...    38   5.6    2
(AM436340) Vitis vinifera contig VV78X279028.29, whole genom...    34   5.6    2
(EY308636) CAWX21142.fwd CAWX Helobdella robusta Primary Ear...    32   5.6    3
(AC177055) Strongylocentrotus purpuratus clone R3-4004C20, W...    38   5.6    6
(DJ386561) Diagnosis of Diseases Associated with Metastasis.       36   5.6    3
(AX281357) Sequence 21 from Patent WO0177376.                      36   5.6    3
(BX908755) Zebrafish DNA sequence from clone DKEY-67F11 in l...    38   5.6    8
(FE190408) LV_NC_RA52C18f Litopenaeus vannamei nerve cord cD...    38   5.8    2
(AM487282) Vitis vinifera contig VV78X195877.10, whole genom...    34   5.8    2
(AC179374) Strongylocentrotus purpuratus clone R3-1101P8, WO...    38   5.9    5
(AC200502) Zea mays chromosome 1 clone CH201-266I1; ZMMBBc02...    38   5.9    2
(BP174388) Cryptomeria japonica mRNA, clone: CC1398R, 3'end,...    38   5.9    2
(AZ145091) SP_0044_A1_G01_T7 Strongylocentrotus purpuratus, ...    32   6.0    3
(BY908016) Cryptomeria japonica cDNA clone: CMFL035_B02, 3'e...    38   6.1    2
(BY901017) Cryptomeria japonica cDNA clone: CMFL013_N15, 3'e...    38   6.1    2
(BZ643398) OGAOW57TC ZM_0.7_1.5_KB Zea mays genomic clone ZM...    32   6.1    3
(EV248780) c2g10up.r1 Fiddler crab late proecdysial limb bud...    32   6.2    3
(DE898509) Macropus eugenii DNA, BAC clone: MEB1-077M05_R, 3...    30   6.2    3
(EB291995) CNSN01-F-025270-501 Normalized CNS library (juven...    38   6.2    2
(AC158905) Mus musculus chromosome 19, clone RP23-237A13, co...    44   6.2    2
(AL141646) Anopheles gambiae GSS T7 end of clone 04C21 of No...    32   6.3    3
(AY764183) Aplysia californica syntaxin mRNA, complete cds.        32   6.4    3
(CU462918) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    36   6.4    3
(EK646331) 1092351260866 Global-Ocean-Sampling_GS-33-01-01-1...    32   6.5    3
(AM452446) Vitis vinifera contig VV78X230057.5, whole genome...    34   6.6    2
(CF087759) QHM16K23.yg.ab1 QH_M sunflower H.argophyllus Heli...    36   6.6    2
(BY899790) Cryptomeria japonica cDNA clone: CMFL010_B13, 3'e...    38   6.7    2
(AC184432) Strongylocentrotus purpuratus clone R3-3090B11, W...    36   6.7    6
(BJ326023) Dictyostelium discoideum cDNA clone:dda3o10, 5' e...    38   6.7    2
(BY897851) Cryptomeria japonica cDNA clone: CMFL004_E05, 3'e...    38   6.8    2
(AC181321) Strongylocentrotus purpuratus clone R3-115E19, WO...    38   7.0    4
(ER280954) 1095595489514 Global-Ocean-Sampling_GS-33-01-01-1...    30   7.0    3
(EJ193372) 1092344217587 Global-Ocean-Sampling_GS-27-01-01-1...    32   7.0    2
(AC178344) Strongylocentrotus purpuratus clone R3-3105E13, W...    36   7.0    4
(AY588382) Humulus lupulus clone HlCAG8 microsatellite seque...    30   7.1    3
(FF324094) 280422141 Pea aphid whole body normalized full le...    32   7.1    2
(FG983634) hem_0026_A12 Chinese mitten crab haemocytes cDNA ...    40   7.1    2
(DH446192) Macropus eugenii DNA with T3 primer, fosmid clone...    34   7.1    2
(DX999798) CHORI103-54N1.TV.1 CHORI103 Schistosoma mansoni g...    30   7.2    3
(EY328161) CAWY1369.rev CAWY Helobdella robusta Subtracted E...    32   7.2    3
(AL844509) Plasmodium falciparum chromosome 13.                    36   7.2    13
(AC108273) Rattus norvegicus clone CH230-166L8, *** SEQUENCI...    38   7.3    2
(CU466433) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    42   7.3    3
(FE149680) LV_LO_RA006E23f Litopenaeus vannamei lymphoid org...    32   7.3    3
(DE922119) Macropus eugenii DNA, BAC clone: MEB1-109J10_F, 5...    38   7.3    2
(FG358835) RM_G_01511 Eriocheir sinensis hepatopancreas cDNA...    32   7.4    3
(EJ834726) 1093017610687 Global-Ocean-Sampling_GS-30-02-01-1...    30   7.4    3
(AC171137) Helobdella robusta clone CH306-1A8, complete sequ...    36   7.4    6
(EU984123) Engraulis japonicus clone EJ16 microsatellite seq...    38   7.5    2
(AC173583) Bos taurus clone CH240-341K10, WORKING DRAFT SEQU...    44   7.5    3
(AC181631) Strongylocentrotus purpuratus clone R3-1105A19, W...    42   7.6    6
(AF413052) Zea mays CAG and TAG long trinucleotide repeat.         32   7.6    3
(AF413050) Zea mays CAG and TAG long trinucleotide repeat.         32   7.7    3
(ED435161) AUAC-aai97b09.b1 Ascaris suum whole genome shotgu...    40   7.8    2
(AL954688) Zebrafish DNA sequence from clone CH211-212L1 in ...    38   7.9    6
(AZ192888) SP_1022_A2_H02_SP6E Strongylocentrotus purpuratus...    32   8.2    3
(EK528988) 1095516000724 Global-Ocean-Sampling_GS-32-01-01-1...    36   8.2    2
(AF238314) Dictyostelium discoideum putative cation-transpor...    34   8.3    4
(AL444181) Fugu rubripes GSS sequence, clone 217A13eF2.            32   8.5    3
(AC176951) Strongylocentrotus purpuratus clone R3-34E13, WOR...    38   8.5    3
(AC176035) Strongylocentrotus purpuratus clone R3-18I5, WORK...    36   8.7    6
(CZ383860) ZMMBF0158P10r ZMMBF Zea mays genomic clone ZMMBF0...    30   8.8    3
(BV292499) S232P6463FB4.T0 Beagle Canis familiaris STS genom...    32   8.9    3
(AM450939) Vitis vinifera contig VV78X048455.10, whole genom...    40   8.9    2
(EB763124) LM6-86R LM Leptosphaeria maculans cDNA, mRNA sequ...    30   8.9    3
(CR788284) Zebrafish DNA sequence from clone DKEYP-13C1 in l...    42   8.9    3
(FH930789) CHO_NF2024xa22f1.ab1 CHO_NF2 Nicotiana tabacum ge...    30   8.9    3
(FE745415) CAYC2986.g1 CAYC Petrolisthes cinctipes heart, ne...    32   9.0    3
(ER649711) SB_BBc170-I16.F SB_BBc Sorghum bicolor genomic 5'...    34   9.1    2
(AC123456) Rattus norvegicus clone CH230-65N6, *** SEQUENCIN...    38   9.1    2
(ER698149) SB_BBc106-B20.F SB_BBc Sorghum bicolor genomic 5'...    34   9.2    2
(AC096205) Rattus norvegicus clone CH230-50G5, *** SEQUENCIN...    38   9.2    2
(AY588386) Humulus lupulus clone HlCAG12 microsatellite sequ...    32   9.2    3
(ER638856) SB_BBc210-C03.F SB_BBc Sorghum bicolor genomic 5'...    34   9.2    2
(ER725716) SB_BBc152-K13.F SB_BBc Sorghum bicolor genomic 5'...    34   9.2    2
(GH598693) G1297P535FB13.T0 C. parvum KSU-1 normalized sporo...    42   9.3    2
(BZ683794) PUBCV45TD ZM_0.6_1.0_KB Zea mays genomic clone ZM...    30   9.3    3
(ER762117) SB_BBc207-L13.F SB_BBc Sorghum bicolor genomic 5'...    34   9.4    2
(EI919053) VUH2-49P12TV VUUBBa (VUH2) Vigna unguiculata geno...    40   9.4    2
(ER701492) SB_BBc195-E17.F SB_BBc Sorghum bicolor genomic 5'...    34   9.5    2
(DE871247) Macropus eugenii DNA, BAC clone: MEB1-041D19_F, 5...    34   9.5    2
(EK663257) 1092352903047 Global-Ocean-Sampling_GS-33-01-01-1...    30   9.5    3
(ER725171) SB_BBc145-P11.F SB_BBc Sorghum bicolor genomic 5'...    34   9.5    2
(ET489433) fcg2x.pk438.c1.f C. graminicola genomic sequence ...    32   9.5    3
(ET223751) S0191O03_SP6 CHORI-214 Salmo salar genomic clone ...    32   9.6    3
(ER744042) SB_BBc19-A22.F SB_BBc Sorghum bicolor genomic 5',...    34   9.6    2
(EI968831) SB_BBc188-C15.F SB_BBc Sorghum bicolor genomic 5'...    34   9.6    2
(EU119383) Achatinella sowerbyana clone AS46 microsatellite ...    32   9.7    3
(CG372306) OG4BI08TC ZM_0.7_1.5_KB Zea mays genomic clone ZM...    32   9.7    3
(DJ458137) Method for analysing genome using microsatellite ...    32   9.8    3
(ER744954) SB_BBc191-H07.F SB_BBc Sorghum bicolor genomic 5'...    34   9.8    2
(EJ979557) 1093022144408 Global-Ocean-Sampling_GS-30-02-01-1...    38   9.8    2
(EJ783387) 1093017296281 Global-Ocean-Sampling_GS-30-02-01-1...    34   9.9    2
(DH474874) Monosiga ovata DNA, fosmid clone: MOF-023H17, gen...    32   10.0   3
(AC168562) Strongylocentrotus purpuratus clone R3-3091C13, W...    36   10.0   6

>(BJ412374) Dictyostelium discoideum cDNA clone:ddv8n01, 5' end,
           single read.
          Length = 781

 Score =  737 bits (372), Expect(3) = 0.0
 Identities = 372/372 (100%)
 Strand = Plus / Plus


Query: 32  aaaatgacatcattaaaatcattaataattacactttttgtattaatttatactattgtt 91
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4   aaaatgacatcattaaaatcattaataattacactttttgtattaatttatactattgtt 63


Query: 92  gttttttcacaacaaaatgaattggaattttatattacatttacaaaatgtccaaatgga 151
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64  gttttttcacaacaaaatgaattggaattttatattacatttacaaaatgtccaaatgga 123


Query: 152 gttggtagcagtaacaatatcacaacaacaattggagaatgtacattgattgaaaattgt 211
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 gttggtagcagtaacaatatcacaacaacaattggagaatgtacattgattgaaaattgt 183


Query: 212 ggaacttataaatcaattaaaacagttgaaaagtttacaaacaattatgagagtagagtt 271
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 ggaacttataaatcaattaaaacagttgaaaagtttacaaacaattatgagagtagagtt 243


Query: 272 tttaacaataataattgtaaaggggttttcagtaagaaaaccatttggtttgaatgtgta 331
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 tttaacaataataattgtaaaggggttttcagtaagaaaaccatttggtttgaatgtgta 303


Query: 332 ccaggtggtgaatatgctgaaggttcagttgtttattgtagtcaatatggaattgatatg 391
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 ccaggtggtgaatatgctgaaggttcagttgtttattgtagtcaatatggaattgatatg 363


Query: 392 aatttacaattt 403
           ||||||||||||
Sbjct: 364 aatttacaattt 375

 Score =  214 bits (108), Expect(3) = 0.0
 Identities = 108/108 (100%)
 Strand = Plus / Plus


Query: 469 tgttgtctcatcaggtggtaatacattctctacctctggtagtagtagcagtggtggtat 528
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgttgtctcatcaggtggtaatacattctctacctctggtagtagtagcagtggtggtat 500


Query: 529 tagtactggttccccatttagtatcactagtggtagtgataagaattt 576
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tagtactggttccccatttagtatcactagtggtagtgataagaattt 548

 Score =  178 bits (90), Expect(3) = 0.0
 Identities = 94/96 (97%)
 Strand = Plus / Plus


Query: 676 tgtctcatcaagtggtaattcattctctagctctagctctagtagtagcagtagtgatat 735
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 648 tgtctcatcaagtggtaattcattctctagctctagctctagtagtagcagtagtgatat 707


Query: 736 tagtactggtttcccatttagtatcactagtggtag 771
           ||||||||| |||||||||||||||||||| |||||
Sbjct: 708 tagtactggnttcccatttagtatcactagnggtag 743

 Score =  123 bits (62), Expect(3) = 4e-55
 Identities = 68/70 (97%)
 Strand = Plus / Plus


Query: 857 ggtccatcctcaactgttgtctcatcaagtggtaattcattctctagctctagctctagt 916
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 ggtccatcctcaactggtgtctcatcaagtggtaattcattctctagctctagctctagt 690


Query: 917 agtagtagta 926
           ||||| ||||
Sbjct: 691 agtagcagta 700

 Score =  105 bits (53), Expect(3) = 4e-55
 Identities = 65/69 (94%)
 Strand = Plus / Plus


Query: 715 tagtagtagcagtagtgatattagtactggtttcccatttagtatcactagtggtagtga 774
           ||||||||||||| ||| |||||||||||||| |||||||||||||||||||||||||||
Sbjct: 480 tagtagtagcagtggtggtattagtactggttccccatttagtatcactagtggtagtga 539


Query: 775 caagaattt 783
            ||||||||
Sbjct: 540 taagaattt 548

 Score = 50.1 bits (25), Expect(3) = 4e-55
 Identities = 34/37 (91%)
 Strand = Plus / Plus


Query: 673 tgttgtctcatcaagtggtaattcattctctagctct 709
           ||||||||||||| |||||||| ||||||||| ||||
Sbjct: 441 tgttgtctcatcaggtggtaatacattctctacctct 477

 Score = 77.8 bits (39), Expect(2) = 6e-15
 Identities = 48/51 (94%)
 Strand = Plus / Plus


Query: 857 ggtccatcctcaactgttgtctcatcaagtggtaattcattctctagctct 907
           ||||||||||||||||||||||||||| |||||||| ||||||||| ||||
Sbjct: 427 ggtccatcctcaactgttgtctcatcaggtggtaatacattctctacctct 477

 Score = 36.2 bits (18), Expect(2) = 6e-15
 Identities = 33/38 (86%)
 Strand = Plus / Plus


Query: 922 tagtactggtttcccatcaagtattaccagtggtagtg 959
           ||||||||||| |||||  ||||| || ||||||||||
Sbjct: 501 tagtactggttccccatttagtatcactagtggtagtg 538

 Score = 77.8 bits (39), Expect = 8e-10
 Identities = 52/57 (91%)
 Strand = Plus / Plus


Query: 508 tagtagtagcagtggtggtattagtactggttccccatttagtatcactagtggtag 564
           ||||||||||||| ||| |||||||||||| | |||||||||||||||||| |||||
Sbjct: 687 tagtagtagcagtagtgatattagtactggnttcccatttagtatcactagnggtag 743

Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 102105510
Number of Hits to DB: 1,007,357,122
Number of extensions: 68573037
Number of successful extensions: 7543036
Number of sequences better than 10.0: 486
Length of query: 1075
Length of database: 101,790,757,118
Length adjustment: 24
Effective length of query: 1051
Effective length of database: 99,340,224,878
Effective search space: 104406576346778
Effective search space used: 104406576346778
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
protein update 2009. 7.29
Homology vs Protein 
Query= Contig-U04256-1 (Contig-U04256-1Q) /CSM_Contig/Contig-U04256-1Q.Seq.d
         (1075 letters)

Database: nrp_A
           3,268,448 sequences; 1,061,185,681 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CP000575_868(CP000575|pid:none) Staphylothermus marinus F1, comp...    36   2.7
BX842652_30(BX842652|pid:none) Bdellovibrio bacteriovorus comple...    35   3.5

>CP000575_868(CP000575|pid:none) Staphylothermus marinus F1,
           complete genome.
          Length = 456

 Score = 35.8 bits (81), Expect = 2.7
 Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
 Frame = +2

Query: 245 FTNNYESRVFNNNNCKGVFSKK---TIWFECVPGGEYAEGSVVYCSQY 379
           F  NY S   NNN CK V + K   T+WF+     +Y  GS+ Y   Y
Sbjct: 53  FVANYRSIFMNNNACKNVLANKAVSTMWFDNNVFKKYCHGSMFYPIPY 100

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3268448
Number of Hits to DB: 1,042,405,643
Number of extensions: 17145608
Number of successful extensions: 42718
Number of sequences better than 10.0: 2
Number of HSP's gapped: 42664
Number of HSP's successfully gapped: 2
Length of query: 358
Length of database: 1,061,185,681
Length adjustment: 130
Effective length of query: 228
Effective length of database: 636,287,441
Effective search space: 145073536548
Effective search space used: 145073536548
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
PSORT 

 psg: 0.99  gvh: 0.65  alm: 0.53  top: 0.27  tms: 0.00  mit: 0.37  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 52.0 %: extracellular, including cell wall
	 16.0 %: cytoplasmic
	 12.0 %: mitochondrial
	  8.0 %: nuclear
	  8.0 %: endoplasmic reticulum
	  4.0 %: vacuolar

>> prediction for Contig-U04256-1 is exc
VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 2
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 1
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0