| Contig-U09546-1 |
| Contig ID |
Contig-U09546-1 |
| Contig update |
2002. 9.13 |
| Contig sequence |
 |
| Gap |
gap included |
| Contig length |
1106 |
| Chromosome number (1..6, M) |
6 |
| Chromosome length |
3595308 |
| Start point |
2554357 |
| End point |
2555423 |
| Strand (PLUS/MINUS) |
PLUS |
| Number of clones |
1 |
| Number of EST |
2 |
| Link to clone list |
U09546 |
| List of clone(s) |
|
| Translated Amino Acid sequence |
|
| Translated Amino Acid sequence (All Frames) |
|
| own update |
2004. 6.10 |
| Homology vs CSM-cDNA |
|
| dna update |
2008.11.16 |
| Homology vs DNA |
Query= Contig-U09546-1 (Contig-U09546-1Q) /CSM_Contig/Contig-U09546-1Q.Seq.d
(1116 letters)
Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(BJ411327) Dictyostelium discoideum cDNA clone:ddv3m22, 5' e... 464 0.0 2
(BJ429551) Dictyostelium discoideum cDNA clone:ddv3m22, 3' e... 361 0.0 5
(AC096672) Trypanosoma brucei chromosome 4 clone RPCI93-24M1... 50 0.042 5
(AC115592) Dictyostelium discoideum chromosome 2 map 1-12595... 38 0.076 9
(CS790008) Sequence 1264 from Patent WO2005031001. 40 0.11 2
(AC161879) Mus musculus BAC clone RP23-264A15 from chromosom... 40 0.11 2
(AB017910) Dictyostelium discoideum myoM gene, complete cds. 38 0.13 2
(AF090533) Dictyostelium discoideum unconventional myosin he... 38 0.13 2
(AZ319203) 1M0038N08R Mouse 10kb plasmid UUGC1M library Mus ... 40 0.14 2
(AC159704) Trypanosoma brucei chromosome 3 clone RPCI93-6N20... 50 0.18 1
(ET785822) CHO_OF635xn06f1.ab1 CHO_OF Nicotiana tabacum geno... 50 0.18 1
(AL456482) T. brucei sheared genomic DNA clone 48c01, revers... 50 0.18 1
(AC116986) Dictyostelium discoideum chromosome 2 map 2234041... 38 0.68 7
(U20619) Mus musculus serine-rich RNA polymerase suppressor ... 48 0.72 1
(CT573031) Mouse DNA sequence from clone RP24-244H14 on chro... 48 0.72 1
(BC006771) Mus musculus karyopherin (importin) alpha 1, mRNA... 48 0.72 1
(CU651590) M.truncatula DNA sequence from clone MTH2-69F9 on... 48 0.72 1
(BD401896) Kidney related gene. 48 0.72 1
(AE014832) Plasmodium falciparum 3D7 chromosome 10 section 4... 48 0.72 1
(AC079430) Mus musculus chromosome 16 clone RP23-185P10, WOR... 48 0.72 1
(AC201417) Strongylocentrotus purpuratus clone R3-17P16, WOR... 48 0.72 1
(AC201346) Strongylocentrotus purpuratus clone R3-16P16, WOR... 48 0.72 1
(AC180925) Strongylocentrotus purpuratus clone R3-3064C21, W... 48 0.72 1
(AK169348) Mus musculus 16 days embryo heart cDNA, RIKEN ful... 48 0.72 1
(AK169311) Mus musculus 16 days embryo heart cDNA, RIKEN ful... 48 0.72 1
(AK154800) Mus musculus NOD-derived CD11c +ve dendritic cell... 48 0.72 1
(AK141446) Mus musculus 12 days embryo spinal cord cDNA, RIK... 48 0.72 1
(AK028307) Mus musculus adult male brain cDNA, RIKEN full-le... 48 0.72 1
(AK028259) Mus musculus 12 days embryo head cDNA, RIKEN full... 48 0.72 1
(FH356929) CHO_OF4677xl05r1.ab1 CHO_OF4 Nicotiana tabacum ge... 48 0.72 1
(FH356846) CHO_OF4677xl05f1.ab1 CHO_OF4 Nicotiana tabacum ge... 48 0.72 1
(EH100249) ia188c12.x1 mouse taste receptor cell, subtracted... 48 0.72 1
(AV221627) Mus musculus adult male brain cDNA, RIKEN full-le... 48 0.72 1
(CX209861) MNS27910 Mouse Neurosphere Normalized cDNA librar... 48 0.72 1
(CV461614) ram01-1ms1-a09 Ram01 Ribes americanum cDNA clone ... 48 0.72 1
(CN690921) E0302D10-5 NIA Mouse E10.5 whole embryo cDNA libr... 48 0.72 1
(CN532113) UI-M-HQ0-cpn-b-15-0-UI.r1 NIH_BMAP_HQ0 Mus muscul... 48 0.72 1
(CK634916) UI-M-HN0-cnj-b-02-0-UI.r1 NIH_BMAP_HN0 Mus muscul... 48 0.72 1
(CJ219711) Mus musculus 5 days embryo whole body cDNA, RIKEN... 48 0.72 1
(CF749748) UI-M-HJ0-cmn-o-06-0-UI.r1 NIH_BMAP_HJ0 Mus muscul... 48 0.72 1
(CA533228) C0346H03-5N NIA Mouse Undifferentiated ES Cell cD... 48 0.72 1
(BY476736) Mus musculus B16 F10Y cells cDNA, RIKEN full-leng... 48 0.72 1
(BY417966) Mus musculus 17 days embryo kidney cDNA, RIKEN fu... 48 0.72 1
(BU921733) 6093-41 Mouse E14.5 retina lambda ZAP II Library ... 48 0.72 1
(BG243320) 602355755F1 NCI_CGAP_Mam1 Mus musculus cDNA clone... 48 0.72 1
(BB770413) Mus musculus B16 F10Y cells cDNA, RIKEN full-leng... 48 0.72 1
(BB622435) Mus musculus adult male olfactory brain cDNA, RIK... 48 0.72 1
(BB005534) Mus musculus 10 days neonate skin cDNA, RIKEN ful... 48 0.72 1
(DQ099283) Arachis hypogaea clone Ah-392 microsatellite sequ... 36 0.73 2
(AC116924) Dictyostelium discoideum chromosome 2 map 6357117... 32 1.1 7
(AY263399) Dictyostelium discoideum strain Ax2 sombrero SmbA... 32 1.2 5
(EB634149) AGENCOURT_54728273 D. mojavensis EST Drosophila m... 40 1.3 3
(AC165364) Mus musculus BAC clone RP23-75J20 from chromosome... 34 1.4 2
(AC025622) Mus musculus chromosome 3, clone RP23-453M11, com... 34 1.5 2
(BP186442) Dugesia japonica cDNA, clone: 01605_HH, expressed... 44 1.7 2
(BD453066) Diagnosis of Diseases Associated with tumor suppr... 34 1.8 7
(AX251545) Sequence 513 from Patent WO0168912. 34 1.8 7
(DB945061) Manihot esculenta mRNA, clone: CAS01_020_F10, 3'end. 44 1.9 2
(DB948179) Manihot esculenta mRNA, clone: CAS01_030_F11, 3'end. 44 1.9 2
(DB944959) Manihot esculenta mRNA, clone: CAS01_020_A10, 3'end. 44 2.0 2
(DB930627) Manihot esculenta mRNA, clone: CAS01_030_F11, 5'end. 44 2.0 2
(DB922224) Manihot esculenta mRNA, clone: CAS01_007_B02, 5'end. 44 2.0 2
(DB926904) Manihot esculenta mRNA, clone: CAS01_020_A10, 5'end. 44 2.0 2
(DB927019) Manihot esculenta mRNA, clone: CAS01_020_F10, 5'end. 44 2.0 2
(AC117072) Dictyostelium discoideum chromosome 2 map 3879572... 44 2.2 8
(BX194486) Danio rerio genomic clone DKEY-216P12, genomic su... 36 2.4 2
(AC117070) Dictyostelium discoideum chromosome 2 map 2097701... 36 2.7 7
(AC115607) Dictyostelium discoideum chromosome 2 map 4559693... 38 2.8 6
(BX546499) Zebrafish DNA sequence from clone DKEY-27P18 in l... 46 2.8 1
(AC159114) Mus musculus BAC RP23-370L19 (Roswell Park Cance... 46 2.8 1
(AC153529) Mus musculus 10 BAC RP23-239G23 (Roswell Park Can... 46 2.8 1
(AR546102) Sequence 1233 from patent US 6747137. 46 2.8 1
(CU463025) Wallaby DNA sequence from clone MEKBa-212C16. 46 2.8 1
(AC146289) Danio rerio clone CH211-96G12, WORKING DRAFT SEQU... 46 2.8 1
(AC092010) Felis catus clone RP86-547A2, WORKING DRAFT SEQUE... 46 2.8 1
(CU442729) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 2.8 1
(CU424470) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 2.8 1
(AC232110) Solanum tuberosum strain Diploid genotype RH89-03... 46 2.8 1
(AC226488) Monodelphis domestica clone VMRC18-88G7, WORKING ... 46 2.8 1
(AC226477) Monodelphis domestica clone VMRC18-271A21, WORKIN... 46 2.8 1
(AC187787) Zea mays chromosome 2 clone CH201-322E20; ZMMBBc0... 46 2.8 1
(AC186703) Microcebus murinus clone CH257-524M8, WORKING DRA... 46 2.8 1
(EJ606982) 1092962015135 Global-Ocean-Sampling_GS-29-01-01-1... 46 2.8 1
(EJ407240) 1093012105515 Global-Ocean-Sampling_GS-28-01-01-1... 46 2.8 1
(EJ377961) 1092963750305 Global-Ocean-Sampling_GS-28-01-01-1... 46 2.8 1
(CW066925) 104_314_10523952_115_30127 Sorghum methylation fi... 46 2.8 1
(CG440708) OG8AA70TV ZM_0.7_1.5_KB Zea mays genomic clone ZM... 46 2.8 1
(CC160597) ig09h04.g1 WGS-ZmaysF (DH5a methyl filtered) Zea ... 46 2.8 1
(DT239583) JGI_CAAT10961.rev CAAT Pimephales promelas brain ... 46 2.8 1
(DR798759) ZM_BFb0021G19.r ZM_BFb Zea mays cDNA 5', mRNA seq... 46 2.8 1
(EK374087) 1095469431126 Global-Ocean-Sampling_GS-31-01-01-1... 36 2.9 2
(AE014847) Plasmodium falciparum 3D7 chromosome 12, section ... 44 3.1 8
(BJ386235) Dictyostelium discoideum cDNA clone:ddc57f18, 3' ... 32 3.1 3
(AC187543) Medicago truncatula chromosome 2 BAC clone mth2-7... 44 3.3 5
(AC006280) Plasmodium falciparum chromosome 12 clone 3D7, **... 44 3.6 6
(AC004688) Plasmodium falciparum chromosome 12 clone 3D7, **... 32 3.6 9
(CU469447) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 36 3.7 4
(AC116305) Dictyostelium discoideum chromosome 2 map 1005175... 34 4.0 12
(AC115598) Dictyostelium discoideum chromosome 2 map 581427-... 40 4.6 7
(AF111942) Dictyostelium discoideum AX4 development protein ... 38 4.9 3
>(BJ411327) Dictyostelium discoideum cDNA clone:ddv3m22, 5' end,
single read.
Length = 494
Score = 464 bits (234), Expect(2) = 0.0
Identities = 234/234 (100%)
Strand = Plus / Plus
Query: 260 ataattcaacaaaaacaaagagaagcaaaagtgaaaatgatttaccgaatgaagaaacta 319
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 ataattcaacaaaaacaaagagaagcaaaagtgaaaatgatttaccgaatgaagaaacta 319
Query: 320 gacatcaagttgaaatggatagaagattcgctgaacaattacatagagaacaacatgaaa 379
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gacatcaagttgaaatggatagaagattcgctgaacaattacatagagaacaacatgaaa 379
Query: 380 atataaatcaaatacaacaattacaaagacgattgcaccttaatcaacaaagaaccaata 439
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 atataaatcaaatacaacaattacaaagacgattgcaccttaatcaacaaagaaccaata 439
Query: 440 atattaatagaaatcatcatggtgatgaagatgaggaggatattgaaatgctta 493
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 atattaatagaaatcatcatggtgatgaagatgaggaggatattgaaatgctta 493
Score = 414 bits (209), Expect(2) = 0.0
Identities = 215/215 (100%)
Strand = Plus / Plus
Query: 1 atagtaacaagaagaaccggtattnaatnatcttcctctgataatggaaatagtaatagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atagtaacaagaagaaccggtattnaatnatcttcctctgataatggaaatagtaatagt 60
Query: 61 aatcatagtagttctatgaataagagaaatacttcaaaaagtaataataaaaaatctaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aatcatagtagttctatgaataagagaaatacttcaaaaagtaataataaaaaatctaca 120
Query: 121 acaacaacaaagacagttttaccaccacccttatcaagtagaactcaagaggaagaagat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 acaacaacaaagacagttttaccaccacccttatcaagtagaactcaagaggaagaagat 180
Query: 181 tatgcactcgcattatccataagcgaaggtcttaa 215
|||||||||||||||||||||||||||||||||||
Sbjct: 181 tatgcactcgcattatccataagcgaaggtcttaa 215
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 1,047,546,562
Number of extensions: 71145754
Number of successful extensions: 7908152
Number of sequences better than 10.0: 148
Length of query: 1116
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 1092
Effective length of database: 97,308,875,965
Effective search space: 106261292553780
Effective search space used: 106261292553780
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
|
| protein update |
2009. 6.26 |
| Homology vs Protein |
Query= Contig-U09546-1 (Contig-U09546-1Q) /CSM_Contig/Contig-U09546-1Q.Seq.d
(1116 letters)
Database: nrp_A
3,204,285 sequences; 1,040,966,779 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY054498_1(AY054498|pid:none) Arabidopsis thaliana Unknown prote... 74 7e-12
AK024996_1(AK024996|pid:none) Homo sapiens cDNA: FLJ21343 fis, c... 72 5e-11
CR760616_1(CR760616|pid:none) Xenopus tropicalis finished cDNA, ... 72 5e-11
BC160676_1(BC160676|pid:none) Xenopus laevis cDNA clone IMAGE:83... 72 5e-11
AB168580_1(AB168580|pid:none) Macaca fascicularis testis cDNA cl... 72 5e-11
AL161792_2(AL161792|pid:none) Human DNA sequence from clone RP11... 72 5e-11
AL161792_4(AL161792|pid:none) Human DNA sequence from clone RP11... 72 5e-11
AL136817_1(AL136817|pid:none) Homo sapiens mRNA; cDNA DKFZp434A0... 72 5e-11
BC130124_1(BC130124|pid:none) Xenopus laevis hypothetical protei... 72 5e-11
FB817272_1(FB817272|pid:none) Sequence 36545 from Patent WO20080... 71 6e-11
AF386995_1(AF386995|pid:none) Arabidopsis thaliana putative prot... 71 6e-11
AL732563_13(AL732563|pid:none) Mouse DNA sequence from clone RP2... 70 1e-10
AC144514_21(AC144514|pid:none) Medicago truncatula clone mth2-12... 70 1e-10
EU968881_1(EU968881|pid:none) Zea mays clone 324703 protein bind... 70 1e-10
AK147608_1(AK147608|pid:none) Mus musculus cDNA, RIKEN full-leng... 70 1e-10
AK302385_1(AK302385|pid:none) Homo sapiens cDNA FLJ61466 complet... 70 2e-10
(Q7L0R7) RecName: Full=RING finger protein 44; &AB384115_1(AB38... 70 2e-10
AL834489_1(AL834489|pid:none) Homo sapiens mRNA; cDNA DKFZp434F1... 70 2e-10
AB029023_1(AB029023|pid:none) Homo sapiens mRNA for KIAA1100 pro... 70 2e-10
(Q3UHJ8) RecName: Full=RING finger protein 44; &AK147349_1(AK14... 69 2e-10
AK171943_1(AK171943|pid:none) Mus musculus activated spleen cDNA... 69 2e-10
AK160090_1(AK160090|pid:none) Mus musculus osteoclast-like cell ... 69 2e-10
(Q08CG8) RecName: Full=RING finger protein 44; &BC124246_1(BC12... 69 2e-10
AK129290_1(AK129290|pid:none) Mus musculus mRNA for mKIAA1100 pr... 69 2e-10
BC017630_1(BC017630|pid:none) Mus musculus ring finger protein 4... 69 2e-10
AM454201_1(AM454201|pid:none) Vitis vinifera contig VV79X002445.... 69 3e-10
BT068198_1(BT068198|pid:none) Zea mays full-length cDNA clone ZM... 68 5e-10
BT054768_1(BT054768|pid:none) Zea mays full-length cDNA clone ZM... 68 5e-10
AL606622_9(AL606622|pid:none) Oryza sativa genomic DNA, chromoso... 68 5e-10
AP008208_2764(AP008208|pid:none) Oryza sativa (japonica cultivar... 68 7e-10
AK066424_1(AK066424|pid:none) Oryza sativa Japonica Group cDNA c... 68 7e-10
(Q93Z92) RecName: Full=E3 ubiquitin-protein ligase At4g11680; ... 68 7e-10
BT039511_1(BT039511|pid:none) Zea mays full-length cDNA clone ZM... 67 9e-10
EU970029_1(EU970029|pid:none) Zea mays clone 338770 protein bind... 67 9e-10
AC135467_5(AC135467|pid:none) Medicago truncatula clone mth2-34h... 67 1e-09
AL022537_20(AL022537|pid:none) Arabidopsis thaliana DNA chromoso... 67 1e-09
AK122819_1(AK122819|pid:none) Homo sapiens cDNA FLJ16418 fis, cl... 66 2e-09
(Q6ZSG1) RecName: Full=RING finger protein 165; &AK127467_1(AK1... 66 2e-09
BC166566_1(BC166566|pid:none) Rattus norvegicus ring finger prot... 66 2e-09
AK133955_1(AK133955|pid:none) Mus musculus 8 days embryo whole b... 66 2e-09
EU953133_1(EU953133|pid:none) Zea mays clone 1385620 protein bin... 66 3e-09
AL049500_11(AL049500|pid:none) Arabidopsis thaliana DNA chromoso... 66 3e-09
AF329846_1(AF329846|pid:none) Gallus gallus ring finger protein ... 66 3e-09
AK103147_1(AK103147|pid:none) Oryza sativa Japonica Group cDNA c... 65 4e-09
(Q6NRV8) RecName: Full=E3 ubiquitin-protein ligase arkadia-B; ... 65 6e-09
AK131304_1(AK131304|pid:none) Homo sapiens cDNA FLJ16278 fis, cl... 65 6e-09
AK095327_1(AK095327|pid:none) Homo sapiens cDNA FLJ38008 fis, cl... 64 7e-09
BC010369_1(BC010369|pid:none) Homo sapiens ring finger protein 1... 64 7e-09
BC147931_1(BC147931|pid:none) Bos taurus ring finger protein 111... 64 7e-09
AX405832_1(AX405832|pid:none) Sequence 247 from Patent WO0222660. 64 7e-09
(Q5R476) RecName: Full=E3 ubiquitin-protein ligase Arkadia; ... 64 7e-09
BX538130_1(BX538130|pid:none) Homo sapiens mRNA; cDNA DKFZp686H1... 64 7e-09
CT573450_1(CT573450|pid:none) Zebrafish DNA sequence from clone ... 64 7e-09
(Q6ZNA4) RecName: Full=E3 ubiquitin-protein ligase Arkadia; ... 64 7e-09
AY084480_1(AY084480|pid:none) Arabidopsis thaliana clone 109181 ... 64 7e-09
AK048110_1(AK048110|pid:none) Mus musculus 16 days embryo head c... 64 7e-09
(Q99ML9) RecName: Full=E3 ubiquitin-protein ligase Arkadia; ... 64 7e-09
AL157474_1(AL157474|pid:none) Homo sapiens mRNA; cDNA DKFZp761D0... 64 7e-09
AK131488_1(AK131488|pid:none) Homo sapiens cDNA FLJ16671 fis, cl... 64 7e-09
(Q66J97) RecName: Full=E3 ubiquitin-protein ligase arkadia-C; ... 64 1e-08
(Q90ZT7) RecName: Full=E3 ubiquitin-protein ligase arkadia-A; ... 64 1e-08
BT040306_1(BT040306|pid:none) Zea mays full-length cDNA clone ZM... 63 2e-08
AL137898_8(AL137898|pid:none) Arabidopsis thaliana DNA chromosom... 62 3e-08
AY059830_1(AY059830|pid:none) Arabidopsis thaliana putative prot... 62 3e-08
FB817268_1(FB817268|pid:none) Sequence 36541 from Patent WO20080... 62 4e-08
BT035414_1(BT035414|pid:none) Zea mays full-length cDNA clone ZM... 62 4e-08
EF083336_1(EF083336|pid:none) Picea sitchensis clone WS0289_N02 ... 62 5e-08
AP005295_8(AP005295|pid:none) Oryza sativa Japonica Group genomi... 61 6e-08
AK227805_1(AK227805|pid:none) Arabidopsis thaliana mRNA for hypo... 61 6e-08
AL078465_3(AL078465|pid:none) Arabidopsis thaliana DNA chromosom... 61 6e-08
EU962783_1(EU962783|pid:none) Zea mays clone 245493 protein bind... 61 6e-08
(Q9WTV7) RecName: Full=E3 ubiquitin-protein ligase RNF12; ... 61 8e-08
AL663003_5(AL663003|pid:none) Oryza sativa genomic DNA, chromoso... 61 8e-08
AC139707_9(AC139707|pid:none) Medicago truncatula clone mth2-16b... 61 8e-08
AC138131_17(AC138131|pid:none) Medicago truncatula clone mth2-21... 61 8e-08
BT033340_1(BT033340|pid:none) Zea mays full-length cDNA clone ZM... 61 8e-08
AY085253_1(AY085253|pid:none) Arabidopsis thaliana clone 141890 ... 61 8e-08
(O82353) RecName: Full=RING-H2 finger protein ATL2M; &AC005397_... 61 8e-08
AK099917_1(AK099917|pid:none) Oryza sativa Japonica Group cDNA c... 60 1e-07
AP004794_18(AP004794|pid:none) Oryza sativa Japonica Group genom... 60 1e-07
AM473379_1(AM473379|pid:none) Vitis vinifera contig VV78X073156.... 60 1e-07
BC168034_1(BC168034|pid:none) Xenopus tropicalis cDNA clone MGC:... 60 2e-07
BT051138_1(BT051138|pid:none) Medicago truncatula clone MTYFP_FQ... 60 2e-07
BT042710_1(BT042710|pid:none) Zea mays full-length cDNA clone ZM... 60 2e-07
AK069888_1(AK069888|pid:none) Oryza sativa Japonica Group cDNA c... 60 2e-07
AY058092_1(AY058092|pid:none) Arabidopsis thaliana At1g63170/F16... 60 2e-07
EF148378_1(EF148378|pid:none) Populus trichocarpa x Populus delt... 60 2e-07
BT056001_1(BT056001|pid:none) Zea mays full-length cDNA clone ZM... 60 2e-07
EF147124_1(EF147124|pid:none) Populus trichocarpa clone WS01227_... 60 2e-07
CR954206_431(CR954206|pid:none) Ostreococcus tauri strain OTTH05... 60 2e-07
EF086824_1(EF086824|pid:none) Picea sitchensis clone WS02711_F11... 60 2e-07
(Q8LDB8) RecName: Full=E3 ubiquitin-protein ligase At1g63170; ... 60 2e-07
AY086095_1(AY086095|pid:none) Arabidopsis thaliana clone 21249 m... 60 2e-07
BT020585_1(BT020585|pid:none) Arabidopsis thaliana At5g45290 gen... 59 2e-07
AC141107_35(AC141107|pid:none) Medicago truncatula clone mth2-34... 59 2e-07
BT033489_1(BT033489|pid:none) Zea mays full-length cDNA clone ZM... 59 3e-07
AC105773_4(AC105773|pid:none) Oryza sativa (japonica cultivar-gr... 59 3e-07
AM454700_2(AM454700|pid:none) Vitis vinifera contig VV78X016295.... 59 4e-07
EU967424_1(EU967424|pid:none) Zea mays clone 302753 protein bind... 59 4e-07
AM461071_3(AM461071|pid:none) Vitis vinifera contig VV78X064470.... 59 4e-07
AC148994_27(AC148994|pid:none) Medicago truncatula chromosome 7 ... 58 5e-07
EU965619_1(EU965619|pid:none) Zea mays clone 287487 RING-H2 fing... 58 5e-07
EU953154_1(EU953154|pid:none) Zea mays clone 1386976 RING-H2 fin... 58 5e-07
(Q07G42) RecName: Full=E3 ubiquitin-protein ligase rnf12; ... 58 7e-07
BC097491_1(BC097491|pid:none) Rattus norvegicus ring finger prot... 58 7e-07
AC131248_21(AC131248|pid:none) Medicago truncatula clone mth2-28... 58 7e-07
AB168660_1(AB168660|pid:none) Macaca fascicularis testis cDNA cl... 58 7e-07
AJ271670_1(AJ271670|pid:none) Homo sapiens Rnf12 gene for RING z... 58 7e-07
AK001334_1(AK001334|pid:none) Homo sapiens cDNA FLJ10472 fis, cl... 58 7e-07
AF155109_1(AF155109|pid:none) Homo sapiens putative ring zinc fi... 58 7e-07
AC142526_12(AC142526|pid:none) Medicago truncatula clone mth2-34... 58 7e-07
EU964568_1(EU964568|pid:none) Zea mays clone 280056 protein bind... 57 9e-07
(Q7T037) RecName: Full=E3 ubiquitin-protein ligase rnf12-B; ... 57 9e-07
AB114041_1(AB114041|pid:none) Xenopus laevis XRnf12C mRNA for XR... 57 9e-07
AK017027_1(AK017027|pid:none) Mus musculus adult male testis cDN... 57 9e-07
(Q641J8) RecName: Full=E3 ubiquitin-protein ligase rnf12-A; ... 57 9e-07
BX957281_1(BX957281|pid:none) Zebrafish DNA sequence from clone ... 57 9e-07
AK063978_1(AK063978|pid:none) Oryza sativa Japonica Group cDNA c... 57 1e-06
AK117391_1(AK117391|pid:none) Arabidopsis thaliana At3g47990 mRN... 57 1e-06
AY168924_1(AY168924|pid:none) Arabidopsis thaliana RES protein (... 57 1e-06
AK317090_1(AK317090|pid:none) Arabidopsis thaliana AT5G10650 mRN... 57 1e-06
AB025631_16(AB025631|pid:none) Arabidopsis thaliana genomic DNA,... 57 1e-06
AY099680_1(AY099680|pid:none) Arabidopsis thaliana Pspzf zinc fi... 57 1e-06
AM489356_2(AM489356|pid:none) Vitis vinifera contig VV78X096721.... 57 1e-06
BT035443_1(BT035443|pid:none) Zea mays full-length cDNA clone ZM... 57 1e-06
BT062506_1(BT062506|pid:none) Zea mays full-length cDNA clone ZM... 57 1e-06
BT015918_1(BT015918|pid:none) Arabidopsis thaliana At5g10650 gen... 57 1e-06
EU967492_1(EU967492|pid:none) Zea mays clone 303679 RING-H2 fing... 57 1e-06
AY084453_1(AY084453|pid:none) Arabidopsis thaliana clone 108568 ... 57 1e-06
AC149050_8(AC149050|pid:none) Medicago truncatula chromosome 7 B... 57 2e-06
AL356173_8(AL356173|pid:none) Neurospora crassa DNA linkage grou... 57 2e-06
AM459058_1(AM459058|pid:none) Vitis vinifera contig VV78X166699.... 57 2e-06
AK130520_1(AK130520|pid:none) Homo sapiens cDNA FLJ27010 fis, cl... 57 2e-06
(Q9ULK6) RecName: Full=RING finger protein 150; Flags: Precursor; 57 2e-06
AB033040_1(AB033040|pid:none) Homo sapiens mRNA for KIAA1214 pro... 57 2e-06
BC101992_1(BC101992|pid:none) Homo sapiens ring finger protein 1... 57 2e-06
CP001160_418(CP001160|pid:none) Thalassiosira pseudonana CCMP133... 57 2e-06
AB384141_1(AB384141|pid:none) Synthetic construct DNA, clone: pF... 57 2e-06
AC126786_7(AC126786|pid:none) Medicago truncatula clone mth2-8c2... 56 2e-06
AB045121_1(AB045121|pid:none) Oryza sativa Japonica Group RRF1 m... 56 2e-06
EU955940_1(EU955940|pid:none) Zea mays clone 1553424 RING-H2 fin... 56 2e-06
AP004880_11(AP004880|pid:none) Oryza sativa Japonica Group genom... 56 2e-06
AP008208_2471(AP008208|pid:none) Oryza sativa (japonica cultivar... 56 2e-06
BT053787_1(BT053787|pid:none) Zea mays full-length cDNA clone ZM... 56 2e-06
AK071468_1(AK071468|pid:none) Oryza sativa Japonica Group cDNA c... 56 2e-06
BT039449_1(BT039449|pid:none) Zea mays full-length cDNA clone ZM... 56 2e-06
(Q2TA44) RecName: Full=RING finger protein 148; Flags: Precursor... 56 3e-06
AF436851_1(AF436851|pid:none) Cucumis melo RING-H2 zinc finger p... 56 3e-06
DQ885600_1(DQ885600|pid:none) Bubalus bubalis ring finger protei... 56 3e-06
(Q0VD51) RecName: Full=RING finger protein 13; &BC119833_1(BC11... 56 3e-06
AL627187_2(AL627187|pid:none) Mouse DNA sequence from clone RP23... 56 3e-06
JC1495(JC1495) regulatory protein G1 - fruit fly (Drosophila mel... 56 3e-06
AF171875_1(AF171875|pid:none) Mus musculus g1-related zinc finge... 56 3e-06
BT045963_1(BT045963|pid:none) Salmo salar clone ssal-rgf-537-317... 56 3e-06
BC017878_1(BC017878|pid:none) Homo sapiens ring finger protein 1... 56 3e-06
AK090771_1(AK090771|pid:none) Homo sapiens cDNA FLJ33452 fis, cl... 56 3e-06
(Q8VEM1) RecName: Full=Goliath homolog; AltName: Full=RING finge... 56 3e-06
EF145460_1(EF145460|pid:none) Populus trichocarpa clone WS01125_... 56 3e-06
(O43567) RecName: Full=RING finger protein 13; &(Q5RCV8) RecNam... 56 3e-06
BC056113_1(BC056113|pid:none) Xenopus laevis hypothetical protei... 56 3e-06
(Q90972) RecName: Full=RING finger protein 13; AltName: Full=C-R... 56 3e-06
(Q9ZT49) RecName: Full=RING-H2 finger protein ATL4L; AltName: Fu... 56 3e-06
AE013599_4255(AE013599|pid:none) Drosophila melanogaster chromos... 56 3e-06
AC140026_28(AC140026|pid:none) Medicago truncatula clone mth2-36... 55 3e-06
AY086760_1(AY086760|pid:none) Arabidopsis thaliana clone 27464 m... 55 3e-06
BC063734_1(BC063734|pid:none) Xenopus laevis hypothetical protei... 55 3e-06
BT034377_1(BT034377|pid:none) Zea mays full-length cDNA clone ZM... 55 3e-06
AF155650_1(AF155650|pid:none) Human mRNA for goliath protein. &... 55 3e-06
BC142200_1(BC142200|pid:none) Bos taurus ring finger protein 130... 55 3e-06
AL031620_5(AL031620|pid:none) Caenorhabditis elegans Cosmid C18B... 55 3e-06
EU952426_1(EU952426|pid:none) Zea mays clone 1280111 RING-H2 fin... 55 3e-06
(Q66HG0) RecName: Full=RING finger protein 13; &BC081881_1(BC08... 55 3e-06
AK167278_1(AK167278|pid:none) Mus musculus blastocyst blastocyst... 55 3e-06
BC017100_1(BC017100|pid:none) Homo sapiens ring finger protein 1... 55 3e-06
AK158046_1(AK158046|pid:none) Mus musculus adult inner ear cDNA,... 55 3e-06
EU969856_1(EU969856|pid:none) Zea mays clone 336516 hypothetical... 55 3e-06
AC119413_27(AC119413|pid:none) Medicago truncatula clone mth2-19... 55 3e-06
(Q8N7C7) RecName: Full=RING finger protein 148; Flags: Precursor... 55 3e-06
(Q86XS8) RecName: Full=Goliath homolog; AltName: Full=RING finge... 55 3e-06
AY533211_1(AY533211|pid:none) Chinchilla lanigera goliath protei... 55 3e-06
AK226506_1(AK226506|pid:none) Arabidopsis thaliana mRNA for hypo... 55 4e-06
AF424605_1(AF424605|pid:none) Arabidopsis thaliana AT4g31450/F3L... 55 4e-06
FB817250_1(FB817250|pid:none) Sequence 36523 from Patent WO20080... 55 4e-06
AK068075_1(AK068075|pid:none) Oryza sativa Japonica Group cDNA c... 55 4e-06
(Q9FL07) RecName: Full=RING-H2 finger protein ATL5I; &AB010699_... 55 4e-06
BC159083_1(BC159083|pid:none) Xenopus tropicalis hypothetical pr... 55 6e-06
BT034346_1(BT034346|pid:none) Zea mays full-length cDNA clone ZM... 55 6e-06
AK108853_1(AK108853|pid:none) Oryza sativa Japonica Group cDNA c... 55 6e-06
BT060464_1(BT060464|pid:none) Zea mays full-length cDNA clone ZM... 55 6e-06
AC148237_11(AC148237|pid:none) Medicago truncatula clone mth2-1o... 55 6e-06
EU972954_1(EU972954|pid:none) Zea mays clone 390675 RING-H2 fing... 55 6e-06
EU961155_1(EU961155|pid:none) Zea mays clone 232985 protein bind... 55 6e-06
CR925810_3(CR925810|pid:none) Zebrafish DNA sequence from clone ... 55 6e-06
AC137821_26(AC137821|pid:none) Medicago truncatula clone mth2-15... 55 6e-06
(Q8GW38) RecName: Full=RING-H2 finger protein ATL1D; &AK119101_... 55 6e-06
BC065620_1(BC065620|pid:none) Danio rerio ring finger protein 13... 55 6e-06
FB746686_1(FB746686|pid:none) Sequence 153 from Patent EP1903111. 55 6e-06
AK127673_1(AK127673|pid:none) Homo sapiens cDNA FLJ45771 fis, cl... 55 6e-06
AM466966_1(AM466966|pid:none) Vitis vinifera contig VV78X170241.... 54 8e-06
EF086419_1(EF086419|pid:none) Picea sitchensis clone WS0294_J07 ... 54 8e-06
FB844018_1(FB844018|pid:none) Sequence 63291 from Patent WO20080... 54 8e-06
AB026654_15(AB026654|pid:none) Arabidopsis thaliana genomic DNA,... 54 8e-06
BT069097_1(BT069097|pid:none) Zea mays full-length cDNA clone ZM... 54 8e-06
(Q9FKX5) RecName: Full=RING-H2 finger protein ATL5P; &AB011474_... 54 8e-06
EU351855_1(EU351855|pid:none) Arabidopsis lyrata At1g04360-like ... 54 8e-06
BT015305_1(BT015305|pid:none) Drosophila melanogaster AT15166 fu... 54 8e-06
CR954217_56(CR954217|pid:none) Ostreococcus tauri strain OTTH059... 54 8e-06
AP005511_20(AP005511|pid:none) Oryza sativa Japonica Group genom... 54 8e-06
AP008208_859(AP008208|pid:none) Oryza sativa (japonica cultivar-... 54 8e-06
EF087725_1(EF087725|pid:none) Picea sitchensis clone WS02738_C13... 54 8e-06
AE014297_1407(AE014297|pid:none) Drosophila melanogaster chromos... 54 8e-06
EU974130_1(EU974130|pid:none) Zea mays clone 440705 zinc finger,... 54 1e-05
(Q566M8) RecName: Full=RING finger protein 150; Flags: Precursor... 54 1e-05
AK108060_1(AK108060|pid:none) Oryza sativa Japonica Group cDNA c... 54 1e-05
AC151824_2(AC151824|pid:none) Medicago truncatula clone mth2-45n... 54 1e-05
CP001328_278(CP001328|pid:none) Micromonas sp. RCC299 chromosome... 54 1e-05
AP005511_13(AP005511|pid:none) Oryza sativa Japonica Group genom... 54 1e-05
BX538350_71(BX538350|pid:none) Cryptosporidium parvum chromosome... 54 1e-05
AC134045_28(AC134045|pid:none) Oryza sativa (japonica cultivar-g... 54 1e-05
(Q9LM69) RecName: Full=RING-H2 finger protein ATL1B; &AC069251_... 54 1e-05
AC157490_15(AC157490|pid:none) Medicago truncatula clone mth2-12... 54 1e-05
BC053118_1(BC053118|pid:none) Danio rerio ring finger protein 11... 54 1e-05
AB020744_8(AB020744|pid:none) Arabidopsis thaliana genomic DNA, ... 54 1e-05
AC007887_19(AC007887|pid:none) Genomic sequence for Arabidopsis ... 54 1e-05
EU965288_1(EU965288|pid:none) Zea mays clone 285047 zinc finger,... 54 1e-05
AM467682_1(AM467682|pid:none) Vitis vinifera contig VV78X221997.... 54 1e-05
AK154071_1(AK154071|pid:none) Mus musculus 2 days neonate thymus... 54 1e-05
(Q9H6Y7) RecName: Full=E3 ubiquitin-protein ligase RNF167; ... 54 1e-05
(P0C034) RecName: Full=RING-H2 finger protein ATL1K; AltName: Fu... 54 1e-05
AC016041_2(AC016041|pid:none) Genomic sequence for Arabidopsis t... 54 1e-05
DQ336954_11(DQ336954|pid:none) Glycine max cultivar Williams 82 ... 54 1e-05
AB025603_4(AB025603|pid:none) Arabidopsis thaliana genomic DNA, ... 54 1e-05
BC124034_1(BC124034|pid:none) Xenopus tropicalis ring finger pro... 54 1e-05
FN313814_1(FN313814|pid:none) Schistosoma japonicum isolate Anhu... 54 1e-05
(Q9M0R4) RecName: Full=Putative RING-H2 finger protein ATL4D; Fl... 54 1e-05
(Q5EAE9) RecName: Full=RING-H2 finger protein ATL5C; Flags: Prec... 54 1e-05
AB023482_15(AB023482|pid:none) Oryza sativa Japonica Group genom... 54 1e-05
GM966277_1(GM966277|pid:none) Sequence 1609 from Patent WO200814... 54 1e-05
AM440441_1(AM440441|pid:none) Vitis vinifera contig VV78X146533.... 54 1e-05
(Q95K04) RecName: Full=RING finger protein 133; &AB070023_1(AB0... 54 1e-05
EF144886_1(EF144886|pid:none) Populus trichocarpa clone WS01119_... 54 1e-05
BT020620_1(BT020620|pid:none) Arabidopsis thaliana At5g05810 gen... 54 1e-05
AJ867480_1(AJ867480|pid:none) Zinnia elegans rh2.1 gene for RING... 54 1e-05
(Q6NRX0) RecName: Full=E3 ubiquitin-protein ligase RNF149; ... 54 1e-05
AK098524_1(AK098524|pid:none) Homo sapiens cDNA FLJ25658 fis, cl... 54 1e-05
AL050060_1(AL050060|pid:none) Homo sapiens mRNA; cDNA DKFZp566H0... 54 1e-05
CP000584_405(CP000584|pid:none) Ostreococcus lucimarinus CCE9901... 54 1e-05
AB006707_12(AB006707|pid:none) Arabidopsis thaliana genomic DNA,... 54 1e-05
AL161577_3(AL161577|pid:none) Arabidopsis thaliana DNA chromosom... 54 1e-05
AY054187_1(AY054187|pid:none) Arabidopsis thaliana AT4g30400/F17... 54 1e-05
(Q9FL42) RecName: Full=Putative RING-H2 finger protein ATL5E; &... 53 2e-05
EF215048_1(EF215048|pid:none) Callithrix jacchus clone P12-51.4_... 53 2e-05
FB817240_1(FB817240|pid:none) Sequence 36513 from Patent WO20080... 53 2e-05
AK066069_1(AK066069|pid:none) Oryza sativa Japonica Group cDNA c... 53 2e-05
(Q9ZV53) RecName: Full=Putative RING-H2 finger protein ATL2C; &... 53 2e-05
AY054122_1(AY054122|pid:none) Homo sapiens Ells2 mRNA, partial c... 53 2e-05
FB844028_1(FB844028|pid:none) Sequence 63301 from Patent WO20080... 53 2e-05
(Q8NHG8) RecName: Full=E3 ubiquitin-protein ligase ZNRF2; ... 53 2e-05
AM434804_4(AM434804|pid:none) Vitis vinifera contig VV78X033615.... 53 2e-05
BT039875_1(BT039875|pid:none) Zea mays full-length cDNA clone ZM... 53 2e-05
EU972549_1(EU972549|pid:none) Zea mays clone 383331 RING-H2 fing... 53 2e-05
BC047964_1(BC047964|pid:none) Xenopus laevis nerve injury gene 2... 53 2e-05
EU953541_1(EU953541|pid:none) Zea mays clone 1432331 RING-H2 fin... 53 2e-05
BC135901_1(BC135901|pid:none) Xenopus tropicalis hypothetical pr... 53 2e-05
BC154845_1(BC154845|pid:none) Xenopus tropicalis hypothetical pr... 53 2e-05
AC006300_6(AC006300|pid:none) Arabidopsis thaliana chromosome 2 ... 53 2e-05
AM494961_8(AM494961|pid:none) Leishmania braziliensis chromosome... 53 2e-05
EF215411_1(EF215411|pid:none) Callithrix jacchus clone N15-44.2_... 53 2e-05
AM883105_1(AM883105|pid:none) Spinacia oleracea mRNA for NEP1-in... 53 2e-05
BC104316_1(BC104316|pid:none) Mus musculus zinc and ring finger ... 53 2e-05
EU957769_1(EU957769|pid:none) Zea mays clone 1615436 unknown mRNA. 53 2e-05
BC138545_1(BC138545|pid:none) Mus musculus ring finger protein (... 53 2e-05
(Q5XIL0) RecName: Full=E3 ubiquitin-protein ligase RNF167; ... 53 2e-05
(Q8W571) RecName: Full=RING-H2 finger protein ATL4O; Flags: Prec... 53 2e-05
BT061188_1(BT061188|pid:none) Zea mays full-length cDNA clone ZM... 53 2e-05
AC123571_13(AC123571|pid:none) Medicago truncatula clone mth1-14... 53 2e-05
AP005511_10(AP005511|pid:none) Oryza sativa Japonica Group genom... 53 2e-05
EU966365_1(EU966365|pid:none) Zea mays clone 293902 zinc finger,... 53 2e-05
EU969154_1(EU969154|pid:none) Zea mays clone 326453 unknown mRNA. 53 2e-05
EU351822_1(EU351822|pid:none) Arabidopsis thaliana ecotype Co-1 ... 53 2e-05
EU956797_1(EU956797|pid:none) Zea mays clone 1574281 RING-finger... 53 2e-05
BT034801_1(BT034801|pid:none) Zea mays full-length cDNA clone ZM... 53 2e-05
AM502233_138(AM502233|pid:none) Leishmania infantum chromosome 15. 53 2e-05
BT041567_1(BT041567|pid:none) Zea mays full-length cDNA clone ZM... 53 2e-05
BT062474_1(BT062474|pid:none) Zea mays full-length cDNA clone ZM... 53 2e-05
AP005823_10(AP005823|pid:none) Oryza sativa Japonica Group genom... 53 2e-05
(P93823) RecName: Full=RING-H2 finger protein ATL1A; &AC000104_... 53 2e-05
CT005254_147(CT005254|pid:none) Leishmania major strain Friedlin... 53 2e-05
EU351836_1(EU351836|pid:none) Arabidopsis thaliana ecotype El-0 ... 53 2e-05
EU351827_1(EU351827|pid:none) Arabidopsis thaliana ecotype Sorbo... 53 2e-05
EF677237_1(EF677237|pid:none) Picea sitchensis clone WS02764_B16... 53 2e-05
BT062663_1(BT062663|pid:none) Zea mays full-length cDNA clone ZM... 53 2e-05
EU351811_1(EU351811|pid:none) Arabidopsis thaliana ecotype Col-0... 53 2e-05
EU351813_1(EU351813|pid:none) Arabidopsis thaliana ecotype Cvi-0... 53 2e-05
EU351820_1(EU351820|pid:none) Arabidopsis thaliana ecotype Bla-1... 53 2e-05
CR954210_296(CR954210|pid:none) Ostreococcus tauri strain OTTH05... 53 2e-05
AM473198_1(AM473198|pid:none) Vitis vinifera contig VV78X021532.... 53 2e-05
(Q8RX29) RecName: Full=RING-H2 finger protein ATL2I; &AY090933_... 52 3e-05
AP003722_4(AP003722|pid:none) Oryza sativa Japonica Group genomi... 52 3e-05
(Q9LSW9) RecName: Full=RING-H2 finger protein ATL5K; AltName: Fu... 52 3e-05
BT034938_1(BT034938|pid:none) Zea mays full-length cDNA clone ZM... 52 3e-05
AP008207_1129(AP008207|pid:none) Oryza sativa (japonica cultivar... 52 3e-05
AM441534_3(AM441534|pid:none) Vitis vinifera contig VV78X035471.... 52 3e-05
BT054881_1(BT054881|pid:none) Zea mays full-length cDNA clone ZM... 52 3e-05
(Q3U2C5) RecName: Full=E3 ubiquitin-protein ligase RNF149; ... 52 3e-05
EU953643_1(EU953643|pid:none) Zea mays clone 1442113 RING-H2 fin... 52 3e-05
AP004818_15(AP004818|pid:none) Oryza sativa Japonica Group genom... 52 3e-05
EU952589_1(EU952589|pid:none) Zea mays clone 1283870 RING-H2 fin... 52 3e-05
EU969815_1(EU969815|pid:none) Zea mays clone 336008 unknown mRNA. 52 3e-05
BT087940_1(BT087940|pid:none) Zea mays full-length cDNA clone ZM... 52 3e-05
EF085550_1(EF085550|pid:none) Picea sitchensis clone WS0276_N19 ... 52 3e-05
EU956991_1(EU956991|pid:none) Zea mays clone 1579770 unknown mRNA. 52 3e-05
EU952161_1(EU952161|pid:none) Zea mays clone 1213824 RING-H2 fin... 52 3e-05
AP004809_13(AP004809|pid:none) Oryza sativa Japonica Group genom... 52 3e-05
FN357321_37(FN357321|pid:none) Schistosoma mansoni genome sequen... 52 3e-05
AC007017_18(AC007017|pid:none) Arabidopsis thaliana chromosome 2... 52 3e-05
AK155360_1(AK155360|pid:none) Mus musculus NOD-derived CD11c +ve... 52 3e-05
AP003771_17(AP003771|pid:none) Oryza sativa Japonica Group genom... 52 3e-05
CP001324_748(CP001324|pid:none) Micromonas sp. RCC299 chromosome... 52 3e-05
AK227673_1(AK227673|pid:none) Arabidopsis thaliana mRNA for hypo... 52 3e-05
AK066589_1(AK066589|pid:none) Oryza sativa Japonica Group cDNA c... 52 4e-05
AK101391_1(AK101391|pid:none) Oryza sativa Japonica Group cDNA c... 52 4e-05
EU952879_1(EU952879|pid:none) Zea mays clone 1292250 hypothetica... 52 4e-05
BT023897_1(BT023897|pid:none) Drosophila melanogaster LP13955 fu... 52 4e-05
AC144737_8(AC144737|pid:none) Oryza sativa (japonica cultivar-gr... 52 4e-05
AB168929_1(AB168929|pid:none) Macaca fascicularis testis cDNA, c... 52 4e-05
EF084437_1(EF084437|pid:none) Picea sitchensis clone WS02728_A19... 52 4e-05
(Q9Y225) RecName: Full=RING finger protein 24; &AL031670_1(AL03... 52 4e-05
BC150372_1(BC150372|pid:none) Danio rerio zgc:171663, mRNA (cDNA... 52 4e-05
AC105259_13(AC105259|pid:none) Oryza sativa (japonica cultivar-g... 52 4e-05
(Q6NQG7) RecName: Full=RING-H2 finger protein ATL1L; &AK176235_... 52 4e-05
AL079313_1(AL079313|pid:none) Homo sapiens mRNA full length inse... 52 4e-05
BT061149_1(BT061149|pid:none) Zea mays full-length cDNA clone ZM... 52 4e-05
CU424444_2(CU424444|pid:none) Zebrafish DNA sequence from clone ... 52 4e-05
AK293272_1(AK293272|pid:none) Homo sapiens cDNA FLJ53858 complet... 52 4e-05
AP003491_9(AP003491|pid:none) Oryza sativa Japonica Group genomi... 52 4e-05
(Q9Y252) RecName: Full=RING finger protein 6; AltName: Full=RING... 52 4e-05
AC120307_11(AC120307|pid:none) Oryza sativa (japonica cultivar-g... 52 4e-05
AM269999_3(AM269999|pid:none) Aspergillus niger contig An02c0040... 52 4e-05
AK101543_1(AK101543|pid:none) Oryza sativa Japonica Group cDNA c... 52 4e-05
AP008207_2444(AP008207|pid:none) Oryza sativa (japonica cultivar... 52 4e-05
AE017345_415(AE017345|pid:none) Cryptococcus neoformans var. neo... 52 4e-05
AM449058_2(AM449058|pid:none) Vitis vinifera contig VV78X275678.... 52 4e-05
AP005511_8(AP005511|pid:none) Oryza sativa Japonica Group genomi... 52 4e-05
AP005511_6(AP005511|pid:none) Oryza sativa Japonica Group genomi... 52 4e-05
EU952645_1(EU952645|pid:none) Zea mays clone 1285281 protein bin... 52 4e-05
AP008208_855(AP008208|pid:none) Oryza sativa (japonica cultivar-... 52 4e-05
AM432595_1(AM432595|pid:none) Vitis vinifera contig VV78X273741.... 52 5e-05
FN357535_20(FN357535|pid:none) Schistosoma mansoni genome sequen... 52 5e-05
AK030575_1(AK030575|pid:none) Mus musculus adult male pituitary ... 52 5e-05
(Q7ZW78) RecName: Full=RING finger protein 181; &CU041374_16(CU... 52 5e-05
AP003251_4(AP003251|pid:none) Oryza sativa Japonica Group genomi... 52 5e-05
(Q91V17) RecName: Full=E3 ubiquitin-protein ligase ZNRF1; ... 52 5e-05
AY664416_6(AY664416|pid:none) Zea mays cultivar Mo17 locus bz, c... 52 5e-05
EF085770_1(EF085770|pid:none) Picea sitchensis clone WS0274_J07 ... 52 5e-05
AK229265_1(AK229265|pid:none) Arabidopsis thaliana mRNA for hypo... 52 5e-05
AF391808_36(AF391808|pid:none) Zea mays cultivar McC bz locus re... 52 5e-05
AP004818_8(AP004818|pid:none) Oryza sativa Japonica Group genomi... 52 5e-05
(Q8ND25) RecName: Full=E3 ubiquitin-protein ligase ZNRF1; ... 52 5e-05
CR859911_1(CR859911|pid:none) Pongo abelii mRNA; cDNA DKFZp469I1... 52 5e-05
AL731620_5(AL731620|pid:none) Oryza sativa genomic DNA, chromoso... 52 5e-05
AE014135_67(AE014135|pid:none) Drosophila melanogaster chromosom... 52 5e-05
EU955413_1(EU955413|pid:none) Zea mays clone 1531547 unknown mRNA. 52 5e-05
(O64763) RecName: Full=RING-H2 finger protein ATL2G; AltName: Fu... 52 5e-05
FB843954_1(FB843954|pid:none) Sequence 63227 from Patent WO20080... 52 5e-05
EU338354_25(EU338354|pid:none) Zea mays cultivar W22 bz gene loc... 52 5e-05
(Q9FG21) RecName: Full=Putative RING-H2 finger protein ATL5D; &... 52 5e-05
AX961900_1(AX961900|pid:none) Sequence 111 from Patent WO03104277. 52 5e-05
AM459489_5(AM459489|pid:none) Vitis vinifera contig VV78X107241.... 52 5e-05
BC095880_1(BC095880|pid:none) Danio rerio zgc:113271, mRNA (cDNA... 52 5e-05
AP004809_16(AP004809|pid:none) Oryza sativa Japonica Group genom... 52 5e-05
FN357535_18(FN357535|pid:none) Schistosoma mansoni genome sequen... 52 5e-05
AX399852_1(AX399852|pid:none) Sequence 23 from Patent WO0218424. 52 5e-05
FB844026_1(FB844026|pid:none) Sequence 63299 from Patent WO20080... 52 5e-05
DQ493650_6(DQ493650|pid:none) Zea mays cultivar A188 bz locus re... 52 5e-05
FB843956_1(FB843956|pid:none) Sequence 63229 from Patent WO20080... 52 5e-05
EU952590_1(EU952590|pid:none) Zea mays clone 1283891 RING-H2 fin... 52 5e-05
AK118593_1(AK118593|pid:none) Arabidopsis thaliana At2g17730 mRN... 51 6e-05
DQ987493_1(DQ987493|pid:none) Gibberella zeae RING-7 protein mRN... 51 6e-05
CU638743_227(CU638743|pid:none) Podospora anserina genomic DNA c... 51 6e-05
AP004777_17(AP004777|pid:none) Oryza sativa Japonica Group genom... 51 6e-05
FB817232_1(FB817232|pid:none) Sequence 36505 from Patent WO20080... 51 6e-05
(Q8NC42) RecName: Full=E3 ubiquitin-protein ligase RNF149; ... 51 6e-05
AC148486_14(AC148486|pid:none) Medicago truncatula clone mth2-56... 51 6e-05
(Q9LZV8) RecName: Full=RING-H2 finger protein ATL5A; &AK229217_... 51 6e-05
BC160840_1(BC160840|pid:none) Rattus norvegicus ring finger prot... 51 6e-05
EU959054_1(EU959054|pid:none) Zea mays clone 209794 RING-H2 fing... 51 6e-05
EF086501_1(EF086501|pid:none) Picea sitchensis clone WS02749_F11... 51 6e-05
BT045365_1(BT045365|pid:none) Salmo salar clone ssal-rgf-519-156... 51 6e-05
AC013722_2(AC013722|pid:none) Homo sapiens BAC clone RP11-299H21... 51 6e-05
AB463234_1(AB463234|pid:none) Synthetic construct DNA, clone: pF... 51 6e-05
BC167061_1(BC167061|pid:none) Rattus norvegicus ring finger prot... 51 6e-05
EU974226_1(EU974226|pid:none) Zea mays clone 443261 ring finger ... 51 6e-05
AK108924_1(AK108924|pid:none) Oryza sativa Japonica Group cDNA c... 51 6e-05
EF083241_1(EF083241|pid:none) Picea sitchensis clone WS02810_F06... 51 6e-05
T04483(T04483) probable ring finger protein - barley &Y14573_3(... 51 6e-05
(Q08CN9) RecName: Full=E3 ubiquitin-protein ligase ZNRF2; ... 51 6e-05
AM479964_1(AM479964|pid:none) Vitis vinifera contig VV78X057791.... 51 6e-05
(Q8GT74) RecName: Full=RING-H2 finger protein ATL2B; AltName: Fu... 51 6e-05
AL844505_71(AL844505|pid:none) Plasmodium falciparum 3D7 chromos... 51 6e-05
(Q9XF63) RecName: Full=RING-H2 finger protein ATL1P; AltName: Fu... 51 6e-05
(Q8TEB7) RecName: Full=E3 ubiquitin-protein ligase RNF128; ... 51 8e-05
(Q570X5) RecName: Full=RING-H2 finger protein ATL1G; &AK220582_... 51 8e-05
AP008207_648(AP008207|pid:none) Oryza sativa (japonica cultivar-... 51 8e-05
AM449058_1(AM449058|pid:none) Vitis vinifera contig VV78X275678.... 51 8e-05
EF677639_1(EF677639|pid:none) Picea sitchensis clone WS02772_E05... 51 8e-05
EU976563_1(EU976563|pid:none) Zea mays clone 983610 RING-H2 fing... 51 8e-05
BT066596_1(BT066596|pid:none) Zea mays full-length cDNA clone ZM... 51 8e-05
AL607001_8(AL607001|pid:none) Oryza sativa genomic DNA, chromoso... 51 8e-05
AL691424_3(AL691424|pid:none) Mouse DNA sequence from clone RP23... 51 8e-05
FB844020_1(FB844020|pid:none) Sequence 63293 from Patent WO20080... 51 8e-05
AC073166_6(AC073166|pid:none) Oryza sativa chromosome 10 BAC OSJ... 51 8e-05
(Q8L9T5) RecName: Full=RING-H2 finger protein ATL3F; AltName: Fu... 51 8e-05
AK004847_1(AK004847|pid:none) Mus musculus adult male liver cDNA... 51 8e-05
AC013482_19(AC013482|pid:none) Genomic sequence for Arabidopsis ... 51 8e-05
CR855186_9(CR855186|pid:none) Oryza sativa genomic DNA, chromoso... 51 8e-05
AK070774_1(AK070774|pid:none) Oryza sativa Japonica Group cDNA c... 51 8e-05
AC145165_3(AC145165|pid:none) Medicago truncatula clone mth2-4j2... 51 8e-05
BT025264_1(BT025264|pid:none) Arabidopsis thaliana At4g33565 mRN... 51 8e-05
AK126553_1(AK126553|pid:none) Homo sapiens cDNA FLJ44589 fis, cl... 51 8e-05
FB817274_1(FB817274|pid:none) Sequence 36547 from Patent WO20080... 51 8e-05
AB041548_1(AB041548|pid:none) Mus musculus brain cDNA, clone MNC... 51 8e-05
BC056677_1(BC056677|pid:none) Homo sapiens ring finger protein 1... 51 8e-05
EU965176_1(EU965176|pid:none) Zea mays clone 284301 protein bind... 51 8e-05
AK146266_1(AK146266|pid:none) Mus musculus TIB-55 BB88 cDNA, RIK... 51 8e-05
BT071444_1(BT071444|pid:none) Picea sitchensis clone WS02912_K16... 51 8e-05
AL590444_60(AL590444|pid:none) chromosome IV of strain GB-M1 of ... 51 8e-05
AF394689_1(AF394689|pid:none) Homo sapiens GRAIL (GRAIL) mRNA, c... 51 8e-05
AC109596_14(AC109596|pid:none) Oryza sativa (japonica cultivar-g... 51 8e-05
(Q9D304) RecName: Full=E3 ubiquitin-protein ligase RNF128; ... 51 8e-05
AC016041_3(AC016041|pid:none) Genomic sequence for Arabidopsis t... 50 1e-04
AL022223_17(AL022223|pid:none) Arabidopsis thaliana DNA chromoso... 50 1e-04
FB874642_1(FB874642|pid:none) Sequence 93915 from Patent WO20080... 50 1e-04
(Q29RU0) RecName: Full=E3 ubiquitin-protein ligase RNF128; ... 50 1e-04
AP008218_1276(AP008218|pid:none) Oryza sativa (japonica cultivar... 50 1e-04
AC097175_11(AC097175|pid:none) Oryza sativa (japonica cultivar-g... 50 1e-04
AC084296_17(AC084296|pid:none) Oryza sativa chromosome 3 BAC OSJ... 50 1e-04
AF079183_1(AF079183|pid:none) Arabidopsis thaliana RING-H2 finge... 50 1e-04
AC140545_22(AC140545|pid:none) Medicago truncatula clone mth2-11... 50 1e-04
(Q6NML0) RecName: Full=RING-H2 finger protein ATL1J; &BT010932_... 50 1e-04
CT025878_1(CT025878|pid:none) Zebrafish DNA sequence from clone ... 50 1e-04
AJ720228_1(AJ720228|pid:none) Gallus gallus mRNA for hypothetica... 50 1e-04
(Q9QYK7) RecName: Full=RING finger protein 11; AltName: Full=NED... 50 1e-04
BC043736_1(BC043736|pid:none) Xenopus laevis ring finger protein... 50 1e-04
BT061449_1(BT061449|pid:none) Zea mays full-length cDNA clone ZM... 50 1e-04
AC009895_3(AC009895|pid:none) Arabidopsis thaliana chromosome II... 50 1e-04
EF087643_1(EF087643|pid:none) Picea sitchensis clone WS02732_D09... 50 1e-04
AP004794_15(AP004794|pid:none) Oryza sativa Japonica Group genom... 50 1e-04
(Q9SRQ8) RecName: Full=RING-H2 finger protein ATL3A; &AC009327_... 50 1e-04
BC170899_1(BC170899|pid:none) Xenopus tropicalis ring finger pro... 50 1e-04
AK068144_1(AK068144|pid:none) Oryza sativa Japonica Group cDNA c... 50 1e-04
AC007576_29(AC007576|pid:none) Arabidopsis thaliana chromosome I... 50 1e-04
BT074923_1(BT074923|pid:none) Osmerus mordax clone omor-rgc-505-... 50 1e-04
(Q08DI6) RecName: Full=RING finger protein 11; &(Q9Y3C5) RecNam... 50 1e-04
AF220206_1(AF220206|pid:none) Mus musculus Nedd4 WW domain-bindi... 50 1e-04
AM463116_3(AM463116|pid:none) Vitis vinifera contig VV78X253715.... 50 1e-04
AP004888_4(AP004888|pid:none) Oryza sativa Japonica Group genomi... 50 1e-04
AM430844_5(AM430844|pid:none) Vitis vinifera contig VV78X248545.... 50 1e-04
BT077077_1(BT077077|pid:none) Caligus rogercresseyi clone crog-e... 50 1e-04
AP003104_7(AP003104|pid:none) Oryza sativa Japonica Group genomi... 50 1e-04
AK293047_1(AK293047|pid:none) Homo sapiens cDNA FLJ77817 complet... 50 1e-04
BT038702_1(BT038702|pid:none) Zea mays full-length cDNA clone ZM... 50 1e-04
AB025631_20(AB025631|pid:none) Arabidopsis thaliana genomic DNA,... 50 1e-04
AK067053_1(AK067053|pid:none) Oryza sativa Japonica Group cDNA c... 50 1e-04
(Q9FHG8) RecName: Full=Putative RING-H2 finger protein ATL5N; &... 50 1e-04
(Q9LF64) RecName: Full=Probable RING-H2 finger protein ATL5G; &... 50 1e-04
AC006248_7(AC006248|pid:none) Arabidopsis thaliana chromosome 2 ... 50 1e-04
BT034774_1(BT034774|pid:none) Zea mays full-length cDNA clone ZM... 50 1e-04
BT066938_1(BT066938|pid:none) Zea mays full-length cDNA clone ZM... 50 1e-04
AK070468_1(AK070468|pid:none) Oryza sativa Japonica Group cDNA c... 50 1e-04
AK008329_1(AK008329|pid:none) Mus musculus adult male small inte... 50 1e-04
AK118283_1(AK118283|pid:none) Arabidopsis thaliana At3g19950 mRN... 50 1e-04
AC073556_35(AC073556|pid:none) Oryza sativa chromosome 3 BAC OSJ... 50 1e-04
AP008207_2104(AP008207|pid:none) Oryza sativa (japonica cultivar... 50 1e-04
BT066953_1(BT066953|pid:none) Zea mays full-length cDNA clone ZM... 50 1e-04
AK060092_1(AK060092|pid:none) Oryza sativa Japonica Group cDNA c... 50 1e-04
EU971935_1(EU971935|pid:none) Zea mays clone 372563 unknown mRNA. 50 1e-04
AY095995_1(AY095995|pid:none) Arabidopsis thaliana AT3g19950/MPN... 50 1e-04
AK002414_1(AK002414|pid:none) Mus musculus adult male kidney cDN... 50 1e-04
AP004687_9(AP004687|pid:none) Oryza sativa Japonica Group genomi... 50 1e-04
FN357583_23(FN357583|pid:none) Schistosoma mansoni genome sequen... 50 1e-04
AC130802_15(AC130802|pid:none) Medicago truncatula clone mth2-28... 50 1e-04
CR954204_434(CR954204|pid:none) Ostreococcus tauri strain OTTH05... 50 1e-04
BT015731_1(BT015731|pid:none) Arabidopsis thaliana At4g28890 mRN... 50 1e-04
AB026654_14(AB026654|pid:none) Arabidopsis thaliana genomic DNA,... 50 1e-04
AC060755_19(AC060755|pid:none) Oryza sativa chromosome 10 BAC OS... 50 1e-04
AB009049_7(AB009049|pid:none) Arabidopsis thaliana genomic DNA, ... 50 1e-04
FB817242_1(FB817242|pid:none) Sequence 36515 from Patent WO20080... 50 1e-04
EU971992_1(EU971992|pid:none) Zea mays clone 373202 unknown mRNA. 50 1e-04
(Q5SPX3) RecName: Full=RING finger protein 215; &AL807825_1(AL8... 50 1e-04
EU973389_1(EU973389|pid:none) Zea mays clone 398008 unknown mRNA. 50 1e-04
AL606615_5(AL606615|pid:none) Oryza sativa genomic DNA, chromoso... 50 1e-04
FB874640_1(FB874640|pid:none) Sequence 93913 from Patent WO20080... 50 2e-04
EF148380_1(EF148380|pid:none) Populus trichocarpa x Populus delt... 50 2e-04
AC144431_2(AC144431|pid:none) Medicago truncatula clone mth2-21i... 50 2e-04
AC091774_10(AC091774|pid:none) Oryza sativa chromosome 6 BAC OJ1... 50 2e-04
G84555(G84555)hypothetical protein At2g17730 [imported] - Arabid... 50 2e-04
AP004040_4(AP004040|pid:none) Oryza sativa Japonica Group genomi... 50 2e-04
CR774200_5(CR774200|pid:none) Zebrafish DNA sequence from clone ... 50 2e-04
AP006533_15(AP006533|pid:none) Oryza sativa Japonica Group genom... 50 2e-04
>AY054498_1(AY054498|pid:none) Arabidopsis thaliana Unknown protein
(At1g04790; F13M7.22) mRNA, complete cds.
&BT008404_1(BT008404|pid:none)
Length = 634
Score = 74.3 bits (181), Expect = 7e-12
Identities = 47/121 (38%), Positives = 59/121 (48%), Gaps = 1/121 (0%)
Frame = +2
Query: 716 LSQEQLNLMTRDFSSNDYELLLQLDENINNKG-ATTSDIENLPVHTLNKPXXXXXXXXXX 892
++ L M RDF+ +DYELLL LDEN + G A+ + I NLP T+
Sbjct: 534 ITSSNLLHMDRDFTEDDYELLLALDENNHRHGGASANRINNLPESTVQT----------- 582
Query: 893 XXXXXXDDNKKNEPTTDVTCCICLCEMEPGDAVRTLPCKHFFHVSCIDQWLKVNKVCPXI 1072
DN + TC ICL + GD +R LPC H FH CID WL +K CP
Sbjct: 583 -------DNFQE------TCVICLETPKIGDTIRHLPCLHKFHKDCIDPWLGRSKSCPVC 629
Query: 1073 K 1075
K
Sbjct: 630 K 630
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 1,074,042,898
Number of extensions: 13962222
Number of successful extensions: 46840
Number of sequences better than 10.0: 1448
Number of HSP's gapped: 46476
Number of HSP's successfully gapped: 1458
Length of query: 372
Length of database: 1,040,966,779
Length adjustment: 130
Effective length of query: 242
Effective length of database: 624,409,729
Effective search space: 151107154418
Effective search space used: 151107154418
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
|
| PSORT |
|
| VS (DIR, S) |
0 |
| VH (FL, L) |
0 |
| VF (FL, S) |
1 |
| AH (FL, L) |
0 |
| AF (FL, S) |
0 |
| SL (DIR, L) |
0 |
| SS (DIR, S) |
0 |
| SH (FL, L) |
0 |
| SF (FL, S) |
0 |
| CH (FL, L) |
0 |
| CF (FL, S) |
0 |
| FCL (DIR, L) |
0 |
| FC (DIR, S) |
0 |
| FC-IC (SUB) |
0 |