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Dicty_cDB
Contig List | Clone List | cDNA Library List
Atlas
Atlas | Atlas Image List
NBDC - LSDB Archive
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Dicty_cDB
Contig List | Clone List | cDNA Library List
Atlas
Atlas | Atlas Image List
Contig-U15244-1
Contig ID Contig-U15244-1
Contig update 2004. 6.11
Contig sequence 
>Contig-U15244-1 (Contig-U15244-1Q) /CSM_Contig/Contig-U15244-1Q.Seq.d
CAAATAGTTATGATCAACAAGATTCAAATCATAATGGATATTTTCAAGAG
ATCCCAATTGGATTAAGCTATCCAACACCAACAGGATCAACACCAGGTAA
TAATAACAATAATAACAATAATAATAATAGTAATAGTGGTAATAATAATC
AAATTAATTCATTAGAGAGTGATAGTGAACCAAATGGAGCAAATATAAAA
CCATCATATTCAGTTAATGCATATCCAAATAATTTTGTTCAACCATATTA
CCAAACAGATAAAATATTTGTAATTAATGGTATGGGTAATCCAACTGCTG
CAGGTGGAAATTTAAGTAATTTAAAGTATAGTAAATTCGCACAAATTTCA
GAGAATTTTACATTTATTTTAAGAATGTTAGTGTTTCCAATGATTGCTGT
GTTTTTTAGTGTACTCTTACCATTATCAAAACCATATGGTGGATTTCTAT
TGGGTTGGGAATATACAATAATGTATATACCTGTTATAACATGTTTTATT
TCATTTTTTATTGTTGGATGGGCTCAAATATTTTGTAAAGGTATTAAAAG
TTGGTTATTACCAATGGCAATTCATATCTTGTTGGTTAGTGTAACATTTT
CATGTATAACGCAATATAGTGAAAGTTATCCACCACCAGTAGTAATTGGA
GTTTCCTATGGTATGAGTGCATCAGTCCTACCGGCATTATTATATTTAAA
ATCAGCGGAAAGATTCAATTGGGGATTCTTTATTGATTTCTTACATTTCA
TGTTATTTATGGTGATTGTAATTGCAACTATATTCCTATGTGTTACATTT
GTAATATTCTTTTCATTAATTGAAGCTCAAACTTTGGTGATGTTAGTATT
CTTTTTCAAAGTGTTTATGTGTAATCAAGCATTACTTTGGATCACTCGTA
AATATTGTCCAGTAAATCAACATAATATTATCACCTATTGGACTGAATCA
ATCTCGGAAATGACATTTTGTTGGGCATTTAGTAGATTTACAAAAATCAA
TTTCCTAGTTTTAATACTCTTAAGAGTGGTTGTAATGTTTCGTTATCTTT
TCTTCCTTTCAGATAAATATTGGAATCTAAGAACTCAAGTTAAAGATCAT
CATGATAGAACTAGACAAAATAGTTGGATTTCAACTGTAAATAGTTTTGA
AAAACCATATTATACAATTTTAGGTCAACTTTTCCCAATTGAAATGGAAA
GAAATGAACATATGACTAGAGTTGTTGATAGAGTTTTATATACATTTATA
AGTTATTGTTCTGTACCATTAATTTATATTTTATTTGCAGTTTGTTTGAG
GTTTTCATATAATGCAAAATTTTATCCATTTGATATTTCGATTGAAGCAT
TTATGTTGGATGTGATTTATGCATTCTTTTCAAGTTTCCTAAGTTATATG
ATATTTTTAGTTATTCGTTATCTCTTTCAAGTTAAATACGATATTTCTTT
ACTTAATCATCCAATTCAAATATTTAGAAAAAATACAAATTTATTAATGT
TTTCAAATTTTAATGCATTTATTATTCCAATAACATTTGTACTTATGCAT
AATAATGTTTATTATTAGTAACACGGNAAAGTT
Gap no gap
Contig length 1583
Chromosome number (1..6, M) 5
Chromosome length 5062330
Start point 3624749
End point 3623163
Strand (PLUS/MINUS) MINUS
Number of clones 2
Number of EST 2
Link to clone list U15244
List of clone(s) 

est1=SFG672E,1,1583
est2=SFG670F,32,330
Translated Amino Acid sequence 
NSYDQQDSNHNGYFQEIPIGLSYPTPTGSTPGNNNNNNNNNNSNSGNNNQINSLESDSEP
NGANIKPSYSVNAYPNNFVQPYYQTDKIFVINGMGNPTAAGGNLSNLKYSKFAQISENFT
FILRMLVFPMIAVFFSVLLPLSKPYGGFLLGWEYTIMYIPVITCFISFFIVGWAQIFCKG
IKSWLLPMAIHILLVSVTFSCITQYSESYPPPVVIGVSYGMSASVLPALLYLKSAERFNW
GFFIDFLHFMLFMVIVIATIFLCVTFVIFFSLIEAQTLVMLVFFFKVFMCNQALLWITRK
YCPVNQHNIITYWTESISEMTFCWAFSRFTKINFLVLILLRVVVMFRYLFFLSDKYWNLR
TQVKDHHDRTRQNSWISTVNSFEKPYYTILGQLFPIEMERNEHMTRVVDRVLYTFISYCS
VPLIYILFAVCLRFSYNAKFYPFDISIEAFMLDVIYAFFSSFLSYMIFLVIRYLFQVKYD
ISLLNHPIQIFRKNTNLLMFSNFNAFIIPITFVLMHNNVYY**hgkv
Translated Amino Acid sequence (All Frames) 
Frame A:
qivminkiqiimdifkrsqld*aiqhqqdqhqviitiitiiiivivviiiklih*rvivn
qmeqi*nhhiqlmhiqiilfnhitkqikyl*lmvwviqllqvei*vi*sivnshkfqril
hlf*ec*cfq*llcflvysyhyqnhmvdfywvgniq*ciyll*hvlfhfllldglkyfvk
vlkvgyyqwqfiscwlv*hfhv*rnivkvihhq**lefpmv*vhqsyrhyyi*nqrkdsi
gdsllisyiscylw*l*lqlysyvlhl*ysfh*lklklw*c*ysfskclcvikhyfgslv
nivq*iniilspiglnqsrk*hfvghlvdlqksis*f*ys*ewl*cfvifssfqinigi*
elklkiimieldkivgfql*ivlknhiiqf*vnfsqlkwkemni*lelliefyihl*viv
lyh*fifylqfv*gfhimqnfihlifrlkhlcwm*fmhsfqvs*vi*yf*lfvisfklnt
iflyliiqfkylekiqiy*cfqilmhllfq*hlylciimfiisntxk


Frame B:
k*l*strfks*wifsrdpnwiklsntnrintr***q**q******w***sn*fire***t
kwskyktiifs*cisk*fcstilpnr*nicn*wyg*snccrwkfk*fkv**irtnfrefy
iyfknvsvsndccvf*ctltiiktiwwisiglgiynnvytcynmfyfifycwmgsnil*r
y*klvitngnsylvg*cnifmynai**klsttssnwsflwyecisptgiiifkisgkiql
gily*fltfhviygdcncnyipmcyicnilfin*ssnfgdvsilfqsvyv*ssitldhs*
ilsskst*yyhlld*inlgndillgi**iyknqfpsfntlksgcnvslsflpfr*ilesk
nss*rss**n*tk*ldfnck*f*ktilynfrstfpn*ngkk*tyd*sc**sfiyiykllf
ctinlyficslfevfi*ckilsi*yfd*siyvgcdlcilfkfpklydifsyslslss*ir
yfft*ssnsni*kkykfinvfkf*ciyysnnictya**clllvtrxs


Frame C:
NSYDQQDSNHNGYFQEIPIGLSYPTPTGSTPGNNNNNNNNNNSNSGNNNQINSLESDSEP
NGANIKPSYSVNAYPNNFVQPYYQTDKIFVINGMGNPTAAGGNLSNLKYSKFAQISENFT
FILRMLVFPMIAVFFSVLLPLSKPYGGFLLGWEYTIMYIPVITCFISFFIVGWAQIFCKG
IKSWLLPMAIHILLVSVTFSCITQYSESYPPPVVIGVSYGMSASVLPALLYLKSAERFNW
GFFIDFLHFMLFMVIVIATIFLCVTFVIFFSLIEAQTLVMLVFFFKVFMCNQALLWITRK
YCPVNQHNIITYWTESISEMTFCWAFSRFTKINFLVLILLRVVVMFRYLFFLSDKYWNLR
TQVKDHHDRTRQNSWISTVNSFEKPYYTILGQLFPIEMERNEHMTRVVDRVLYTFISYCS
VPLIYILFAVCLRFSYNAKFYPFDISIEAFMLDVIYAFFSSFLSYMIFLVIRYLFQVKYD
ISLLNHPIQIFRKNTNLLMFSNFNAFIIPITFVLMHNNVYY**hgkv
own update 2004. 6.23
Homology vs CSM-cDNA 
Query= Contig-U15244-1 (Contig-U15244-1Q)
/CSM_Contig/Contig-U15244-1Q.Seq.d
         (1583 letters)

Database: CSM
           8402 sequences; 8,075,542 total letters


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

Contig-U15244-1 (Contig-U15244-1Q) /CSM_Contig/Conti...  2819  0.0
Contig-U14845-1 (Contig-U14845-1Q) /CSM_Contig/Conti...    38  0.041
Contig-U14711-1 (Contig-U14711-1Q) /CSM_Contig/Conti...    38  0.041
Contig-U15320-1 (Contig-U15320-1Q) /CSM_Contig/Conti...    36  0.16
Contig-U12926-1 (Contig-U12926-1Q) /CSM_Contig/Conti...    36  0.16
Contig-U11768-1 (Contig-U11768-1Q) /CSM_Contig/Conti...    36  0.16
Contig-U10898-1 (Contig-U10898-1Q) /CSM_Contig/Conti...    36  0.16
Contig-U09615-1 (Contig-U09615-1Q) /CSM_Contig/Conti...    36  0.16
Contig-U08110-1 (Contig-U08110-1Q) /CSM_Contig/Conti...    36  0.16
Contig-U06985-1 (Contig-U06985-1Q) /CSM_Contig/Conti...    36  0.16

>Contig-U15244-1 (Contig-U15244-1Q) /CSM_Contig/Contig-U15244-1Q.Seq.d
          Length = 1583

 Score = 2819 bits (1422), Expect = 0.0
 Identities = 1425/1425 (100%)
 Strand = Plus / Plus

                                                                        
Query: 159  tcattagagagtgatagtgaaccaaatggagcaaatataaaaccatcatattcagttaat 218
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159  tcattagagagtgatagtgaaccaaatggagcaaatataaaaccatcatattcagttaat 218

                                                                        
Query: 219  gcatatccaaataattttgttcaaccatattaccaaacagataaaatatttgtaattaat 278
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219  gcatatccaaataattttgttcaaccatattaccaaacagataaaatatttgtaattaat 278

                                                                        
Query: 279  ggtatgggtaatccaactgctgcaggtggaaatttaagtaatttaaagtatagtaaattc 338
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279  ggtatgggtaatccaactgctgcaggtggaaatttaagtaatttaaagtatagtaaattc 338

                                                                        
Query: 339  gcacaaatttcagagaattttacatttattttaagaatgttagtgtttccaatgattgct 398
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339  gcacaaatttcagagaattttacatttattttaagaatgttagtgtttccaatgattgct 398

                                                                        
Query: 399  gtgttttttagtgtactcttaccattatcaaaaccatatggtggatttctattgggttgg 458
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399  gtgttttttagtgtactcttaccattatcaaaaccatatggtggatttctattgggttgg 458

                                                                        
Query: 459  gaatatacaataatgtatatacctgttataacatgttttatttcattttttattgttgga 518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459  gaatatacaataatgtatatacctgttataacatgttttatttcattttttattgttgga 518

                                                                        
Query: 519  tgggctcaaatattttgtaaaggtattaaaagttggttattaccaatggcaattcatatc 578
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519  tgggctcaaatattttgtaaaggtattaaaagttggttattaccaatggcaattcatatc 578

                                                                        
Query: 579  ttgttggttagtgtaacattttcatgtataacgcaatatagtgaaagttatccaccacca 638
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579  ttgttggttagtgtaacattttcatgtataacgcaatatagtgaaagttatccaccacca 638

                                                                        
Query: 639  gtagtaattggagtttcctatggtatgagtgcatcagtcctaccggcattattatattta 698
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639  gtagtaattggagtttcctatggtatgagtgcatcagtcctaccggcattattatattta 698

                                                                        
Query: 699  aaatcagcggaaagattcaattggggattctttattgatttcttacatttcatgttattt 758
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 699  aaatcagcggaaagattcaattggggattctttattgatttcttacatttcatgttattt 758

                                                                        
Query: 759  atggtgattgtaattgcaactatattcctatgtgttacatttgtaatattcttttcatta 818
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 759  atggtgattgtaattgcaactatattcctatgtgttacatttgtaatattcttttcatta 818

                                                                        
Query: 819  attgaagctcaaactttggtgatgttagtattctttttcaaagtgtttatgtgtaatcaa 878
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 819  attgaagctcaaactttggtgatgttagtattctttttcaaagtgtttatgtgtaatcaa 878

                                                                        
Query: 879  gcattactttggatcactcgtaaatattgtccagtaaatcaacataatattatcacctat 938
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 879  gcattactttggatcactcgtaaatattgtccagtaaatcaacataatattatcacctat 938

                                                                        
Query: 939  tggactgaatcaatctcggaaatgacattttgttgggcatttagtagatttacaaaaatc 998
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 939  tggactgaatcaatctcggaaatgacattttgttgggcatttagtagatttacaaaaatc 998

                                                                        
Query: 999  aatttcctagttttaatactcttaagagtggttgtaatgtttcgttatcttttcttcctt 1058
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 999  aatttcctagttttaatactcttaagagtggttgtaatgtttcgttatcttttcttcctt 1058

                                                                        
Query: 1059 tcagataaatattggaatctaagaactcaagttaaagatcatcatgatagaactagacaa 1118
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1059 tcagataaatattggaatctaagaactcaagttaaagatcatcatgatagaactagacaa 1118

                                                                        
Query: 1119 aatagttggatttcaactgtaaatagttttgaaaaaccatattatacaattttaggtcaa 1178
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1119 aatagttggatttcaactgtaaatagttttgaaaaaccatattatacaattttaggtcaa 1178

                                                                        
Query: 1179 cttttcccaattgaaatggaaagaaatgaacatatgactagagttgttgatagagtttta 1238
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1179 cttttcccaattgaaatggaaagaaatgaacatatgactagagttgttgatagagtttta 1238

                                                                        
Query: 1239 tatacatttataagttattgttctgtaccattaatttatattttatttgcagtttgtttg 1298
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1239 tatacatttataagttattgttctgtaccattaatttatattttatttgcagtttgtttg 1298

                                                                        
Query: 1299 aggttttcatataatgcaaaattttatccatttgatatttcgattgaagcatttatgttg 1358
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1299 aggttttcatataatgcaaaattttatccatttgatatttcgattgaagcatttatgttg 1358

                                                                        
Query: 1359 gatgtgatttatgcattcttttcaagtttcctaagttatatgatatttttagttattcgt 1418
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1359 gatgtgatttatgcattcttttcaagtttcctaagttatatgatatttttagttattcgt 1418

                                                                        
Query: 1419 tatctctttcaagttaaatacgatatttctttacttaatcatccaattcaaatatttaga 1478
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1419 tatctctttcaagttaaatacgatatttctttacttaatcatccaattcaaatatttaga 1478

                                                                        
Query: 1479 aaaaatacaaatttattaatgttttcaaattttaatgcatttattattccaataacattt 1538
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1479 aaaaatacaaatttattaatgttttcaaattttaatgcatttattattccaataacattt 1538

                                                         
Query: 1539 gtacttatgcataataatgtttattattagtaacacggnaaagtt 1583
            |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1539 gtacttatgcataataatgtttattattagtaacacggnaaagtt 1583


 Score =  192 bits (97), Expect = 1e-48
 Identities = 97/97 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  caaatagttatgatcaacaagattcaaatcataatggatattttcaagagatcccaattg 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  caaatagttatgatcaacaagattcaaatcataatggatattttcaagagatcccaattg 60

                                               
Query: 61 gattaagctatccaacaccaacaggatcaacaccagg 97
          |||||||||||||||||||||||||||||||||||||
Sbjct: 61 gattaagctatccaacaccaacaggatcaacaccagg 97


>Contig-U14845-1 (Contig-U14845-1Q) /CSM_Contig/Contig-U14845-1Q.Seq.d
          Length = 630

 Score = 38.2 bits (19), Expect = 0.041
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 268 ttgtaattaatggtatggg 286
           |||||||||||||||||||
Sbjct: 311 ttgtaattaatggtatggg 293


>Contig-U14711-1 (Contig-U14711-1Q) /CSM_Contig/Contig-U14711-1Q.Seq.d
          Length = 1240

 Score = 38.2 bits (19), Expect = 0.041
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 1130 ttcaactgtaaatagttttgaaa 1152
            |||||||||||||| ||||||||
Sbjct: 866  ttcaactgtaaatatttttgaaa 888


  Database: CSM
    Posted date:  Jun 21, 2004  1:35 PM
  Number of letters in database: 8,075,542
  Number of sequences in database:  8402
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 30,989
Number of Sequences: 8402
Number of extensions: 30989
Number of successful extensions: 3161
Number of sequences better than 10.0: 342
length of query: 1583
length of database: 8,075,542
effective HSP length: 16
effective length of query: 1567
effective length of database: 7,941,110
effective search space: 12443719370
effective search space used: 12443719370
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2009. 1.17
Homology vs DNA 
Query= Contig-U15244-1 (Contig-U15244-1Q) /CSM_Contig/Contig-U15244-1Q.Seq.d
         (1583 letters)

Database: ddbj_B
           98,226,423 sequences; 98,766,808,389 total letters

Searching..................................................done

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(BJ400766) Dictyostelium discoideum cDNA clone:dds14o18, 3' ...  1528   0.0    1
(BJ391024) Dictyostelium discoideum cDNA clone:dds14o18, 5' ...   835   0.0    2
(BJ391010) Dictyostelium discoideum cDNA clone:dds14k18, 5' ...   323   e-115  2
(AC116925) Dictyostelium discoideum chromosome 2 map 4189423...    36   0.003  6
(AL110479) Caenorhabditis elegans YAC Y105C5B.                     50   0.006  9
(BA000021) Wigglesworthia glossinidia endosymbiont of Glossi...    36   0.011  17
(BX255905) Zebrafish DNA sequence from clone DKEY-11B8 in li...    40   0.012  2
(BX207763) Danio rerio genomic clone DKEY-247I13, genomic su...    40   0.015  2
(AC168811) Strongylocentrotus purpuratus clone R3-13G2, WORK...    54   0.017  1
(CP000915) Francisella tularensis subsp. mediasiatica FSC147...    40   0.039  18
(AC143322) Homo sapiens chromosome 16 clone RP11-704M10, WOR...    46   0.052  6
(AC171665) Bos taurus clone CH240-178I6, WORKING DRAFT SEQUE...    52   0.068  1
(BB322611) Mus musculus adult male adrenal gland cDNA, RIKEN...    52   0.068  1
(CU424485) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    40   0.068  6
(AL035477) Plasmodium falciparum MAL4P4.                           36   0.079  14
(AC021181) Homo sapiens chromosome 12 clone RP11-730K16, WOR...    40   0.082  12
(AE014825) Plasmodium falciparum 3D7 chromosome 14 section 1...    34   0.097  14
(AX344573) Sequence 24 from Patent WO0200932.                      34   0.11   15
(AE014832) Plasmodium falciparum 3D7 chromosome 10 section 4...    38   0.13   14
(AL844507) Plasmodium falciparum chromosome 8.                     36   0.14   19
(CR759811) Zebrafish DNA sequence from clone CH211-190M18 in...    34   0.15   9
(AL445563) Mycoplasma pulmonis (strain UAB CTIP) complete ge...    34   0.16   15
(CP000728) Clostridium botulinum F str. Langeland, complete ...    38   0.20   20
(DQ538565) Hyposoter exiguae isolate 2 16S ribosomal RNA gen...    40   0.21   2
(DQ538564) Hyposoter exiguae isolate 1 16S ribosomal RNA gen...    40   0.21   2
(AG280534) Mus musculus molossinus DNA, clone:MSMg01-051O11....    38   0.26   3
(BX511257) Zebrafish DNA sequence from clone DKEY-280E21 in ...    50   0.27   1
(BE962104) 601655180R1 NIH_MGC_65 Homo sapiens cDNA clone IM...    50   0.27   1
(AE013218) Buchnera aphidicola str. Sg (Schizaphis graminum)...    36   0.28   19
(CR456629) Zebrafish DNA sequence from clone DKEY-42B22 in l...    38   0.33   10
(AL158161) Human DNA sequence *** SEQUENCING CANCELLED *** f...    40   0.36   8
(AC006278) Plasmodium falciparum chromosome 12 clone PFYAC34...    38   0.36   9
(BX950856) Zebrafish DNA sequence from clone DKEY-205L20 in ...    38   0.37   7
(EY390514) CAXA8774.rev CAXA Helobdella robusta Subtracted L...    42   0.37   2
(AP001687) Homo sapiens genomic DNA, chromosome 21q, section...    40   0.39   12
(FH617941) CHO_OF4943xi04f1.ab1 CHO_OF4 Nicotiana tabacum ge...    46   0.39   2
(AC181031) Strongylocentrotus purpuratus clone R3-3050P16, W...    38   0.42   8
(AC195753) Homo sapiens chromosome 15 clone WI2-537I13, comp...    46   0.44   4
(CR392346) Zebrafish DNA sequence from clone DKEY-15G17 in l...    38   0.47   10
(AC116305) Dictyostelium discoideum chromosome 2 map 1005175...    32   0.47   14
(AB022215) Arabidopsis thaliana genomic DNA, chromosome 3, P...    38   0.51   6
(CU464013) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    42   0.56   8
(BZ566589) pacs2-164_6181.x1 pacs2-164 Pseudomonas aeruginos...    40   0.62   3
(CU914812) Zebrafish DNA sequence from clone CH1073-306I5 in...    34   0.63   2
(CP000048) Borrelia hermsii DAH, complete genome.                  36   0.64   20
(AE014817) Plasmodium falciparum 3D7 chromosome 14 section 2...    38   0.67   15
(AC011678) Homo sapiens clone RP11-14B7, WORKING DRAFT SEQUE...    38   0.74   9
(AC011187) Homo sapiens clone RP11-13I6, WORKING DRAFT SEQUE...    36   0.74   9
(DJ386633) Diagnosis of Diseases Associated with Metastasis.       36   0.84   5
(AX348695) Sequence 153 from Patent WO0202807.                     36   0.84   5
(AX281429) Sequence 93 from Patent WO0177376.                      36   0.84   5
(AC116921) Dictyostelium discoideum chromosome 2 map 4624505...    32   0.85   7
(AC006281) Plasmodium falciparum chromosome 12 clone PFYACB8...    34   0.93   12
(AC005139) Plasmodium falciparum chromosome 12, *** SEQUENCI...    30   0.95   17
(AR584245) Sequence 2 from patent US 6797466.                      38   1.0    8
(AR271570) Sequence 2 from patent US 6503729.                      38   1.0    8
(L77118) Methanocaldococcus jannaschii DSM 2661 large extra-...    38   1.0    8
(BX927243) Zebrafish DNA sequence from clone DKEY-21E2 in li...    48   1.1    1
(AC105275) Homo sapiens chromosome 1 clone RP11-359E8, compl...    48   1.1    1
(AL627109) Human DNA sequence *** SEQUENCING CANCELLED *** f...    48   1.1    1
(AL390194) Human DNA sequence *** SEQUENCING CANCELLED *** f...    48   1.1    1
(AC221661) Bos taurus clone CH240-389E8, WORKING DRAFT SEQUE...    48   1.1    1
(AC174939) Bos taurus clone CH240-203N16, WORKING DRAFT SEQU...    48   1.1    1
(AC171925) Bos taurus clone CH240-86J23, WORKING DRAFT SEQUE...    48   1.1    1
(AC016192) Homo sapiens clone RP11-24B10, WORKING DRAFT SEQU...    48   1.1    1
(AQ605164) HS_2136_B1_A04_T7C CIT Approved Human Genomic Spe...    48   1.1    1
(ET414455) S0040K08_T7 CHORI-214 Salmo salar genomic clone S...    48   1.1    1
(CU776076) A BAC library has been constructed from PN40024 g...    48   1.1    1
(DW583119) EST_ssal_rgb2_47538 rgb2 Salmo salar cDNA clone s...    48   1.1    1
(DB733058) Apis mellifera head cDNA, RIKEN full-length enric...    48   1.1    1
(CN156834) 944265 MARC 4PIG Sus scrofa cDNA 5', mRNA sequence.     48   1.1    1
(AC005308) Plasmodium falciparum chromosome 12 clone PFYAC49...    32   1.1    15
(AC116924) Dictyostelium discoideum chromosome 2 map 6357117...    36   1.1    8
(AC114263) Dictyostelium discoideum chromosome 2 map 215673-...    34   1.1    10
(AC176318) Strongylocentrotus purpuratus clone R3-3054G14, W...    40   1.1    7
(AF250284) Amsacta moorei entomopoxvirus, complete genome.         34   1.1    13
(AP009247) Candidatus Vesicomyosocius okutanii HA DNA, compl...    36   1.2    21
(AC004153) Plasmodium falciparum chromosome 12 clone PFYAC81...    34   1.2    11
(BX629343) Zebrafish DNA sequence from clone DKEY-66M17 in l...    32   1.2    11
(AC170548) Bos taurus clone CH240-221M1, WORKING DRAFT SEQUE...    34   1.3    10
(AX458577) Sequence 123 from Patent WO0246454.                     36   1.4    10
(AL953858) Zebrafish DNA sequence from clone CH211-121H11 in...    36   1.5    6
(CU915516) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    44   1.5    8
(AX346627) Sequence 1698 from Patent WO0200928.                    38   1.5    4
(AC174426) Felis catus clone RP86-265K10, WORKING DRAFT SEQU...    40   1.5    8
(AC137821) Medicago truncatula chromosome 8 clone mth2-15o11...    44   1.6    8
(AL133371) Human chromosome 14 DNA sequence BAC R-219E7 of l...    38   1.7    7
(CU469464) Candidatus Phytoplasma mali strain AT complete ch...    36   1.8    17
(AL031745) Plasmodium falciparum DNA from MAL1P2.                  32   1.9    15
(AL929352) Plasmodium falciparum strain 3D7, chromosome 5, s...    34   1.9    14
(CR382399) Plasmodium falciparum chromosome 6, complete sequ...    36   1.9    15
(DX889883) KBrH017G06R KBrH, Brassica rapa HindIII BAC libra...    32   2.0    4
(AM458193) Vitis vinifera contig VV78X207471.5, whole genome...    32   2.0    4
(AE014820) Plasmodium falciparum 3D7 chromosome 14 section 5...    36   2.0    13
(AC176000) Strongylocentrotus purpuratus clone R3-3028F2, WO...    38   2.1    7
(AC112846) Rattus norvegicus clone CH230-130E10, *** SEQUENC...    36   2.1    7
(AC063955) Homo sapiens 3 BAC RP11-441M10 (Roswell Park Canc...    32   2.1    2
(AC024446) Homo sapiens chromosome 3 clone RP11-120J5 map 3,...    32   2.1    2
(AC223569) Bos taurus clone CH240-465C23, WORKING DRAFT SEQU...    34   2.1    2
(AC012401) Homo sapiens chromosome 3 clone RP11-209H21 map 3...    32   2.1    2

>(BJ400766) Dictyostelium discoideum cDNA clone:dds14o18, 3' end,
            single read.
          Length = 774

 Score = 1528 bits (771), Expect = 0.0
 Identities = 774/774 (100%)
 Strand = Plus / Minus


Query: 810  ttttcattaattgaagctcaaactttggtgatgttagtattctttttcaaagtgtttatg 869
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 774  ttttcattaattgaagctcaaactttggtgatgttagtattctttttcaaagtgtttatg 715


Query: 870  tgtaatcaagcattactttggatcactcgtaaatattgtccagtaaatcaacataatatt 929
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 714  tgtaatcaagcattactttggatcactcgtaaatattgtccagtaaatcaacataatatt 655


Query: 930  atcacctattggactgaatcaatctcggaaatgacattttgttgggcatttagtagattt 989
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654  atcacctattggactgaatcaatctcggaaatgacattttgttgggcatttagtagattt 595


Query: 990  acaaaaatcaatttcctagttttaatactcttaagagtggttgtaatgtttcgttatctt 1049
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594  acaaaaatcaatttcctagttttaatactcttaagagtggttgtaatgtttcgttatctt 535


Query: 1050 ttcttcctttcagataaatattggaatctaagaactcaagttaaagatcatcatgataga 1109
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534  ttcttcctttcagataaatattggaatctaagaactcaagttaaagatcatcatgataga 475


Query: 1110 actagacaaaatagttggatttcaactgtaaatagttttgaaaaaccatattatacaatt 1169
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474  actagacaaaatagttggatttcaactgtaaatagttttgaaaaaccatattatacaatt 415


Query: 1170 ttaggtcaacttttcccaattgaaatggaaagaaatgaacatatgactagagttgttgat 1229
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414  ttaggtcaacttttcccaattgaaatggaaagaaatgaacatatgactagagttgttgat 355


Query: 1230 agagttttatatacatttataagttattgttctgtaccattaatttatattttatttgca 1289
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354  agagttttatatacatttataagttattgttctgtaccattaatttatattttatttgca 295


Query: 1290 gtttgtttgaggttttcatataatgcaaaattttatccatttgatatttcgattgaagca 1349
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294  gtttgtttgaggttttcatataatgcaaaattttatccatttgatatttcgattgaagca 235


Query: 1350 tttatgttggatgtgatttatgcattcttttcaagtttcctaagttatatgatattttta 1409
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 234  tttatgttggatgtgatttatgcattcttttcaagtttcctaagttatatgatattttta 175


Query: 1410 gttattcgttatctctttcaagttaaatacgatatttctttacttaatcatccaattcaa 1469
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 174  gttattcgttatctctttcaagttaaatacgatatttctttacttaatcatccaattcaa 115


Query: 1470 atatttagaaaaaatacaaatttattaatgttttcaaattttaatgcatttattattcca 1529
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 114  atatttagaaaaaatacaaatttattaatgttttcaaattttaatgcatttattattcca 55


Query: 1530 ataacatttgtacttatgcataataatgtttattattagtaacacggnaaagtt 1583
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 54   ataacatttgtacttatgcataataatgtttattattagtaacacggnaaagtt 1

Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 98226423
Number of Hits to DB: 2,141,186,311
Number of extensions: 137252238
Number of successful extensions: 11924485
Number of sequences better than 10.0: 279
Length of query: 1583
Length of database: 98,766,808,389
Length adjustment: 24
Effective length of query: 1559
Effective length of database: 100,704,341,533
Effective search space: 156998068449947
Effective search space used: 156998068449947
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
protein update 2009. 7.15
Homology vs Protein 
Query= Contig-U15244-1 (Contig-U15244-1Q) /CSM_Contig/Contig-U15244-1Q.Seq.d
         (1583 letters)

Database: nrp_B
           3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB024528_10(AB024528|pid:none) Halocynthia roretzi mitochondrial...    42   0.082
AE017220_4272(AE017220|pid:none) Salmonella enterica subsp. ente...    40   0.18
CP000361_1939(CP000361|pid:none) Arcobacter butzleri RM4018, com...    39   0.53
AE006468_4255(AE006468|pid:none) Salmonella enterica subsp. ente...    39   0.53
CP000379_1004(CP000379|pid:none) Burkholderia cenocepacia AU 105...    39   0.53
AM933172_4133(AM933172|pid:none) Salmonella enterica subsp. ente...    39   0.53
FN392320_1125(FN392320|pid:none) Pichia pastoris GS115 chromosom...    39   0.53
AM933173_4093(AM933173|pid:none) Salmonella enterica subsp. ente...    39   0.53
CP000880_3115(CP000880|pid:none) Salmonella enterica subsp. ariz...    39   0.53
T31613(T31613)hypothetical protein Y50E8A.i - Caenorhabditis ele...    39   0.70
CP000557_3343(CP000557|pid:none) Geobacillus thermodenitrificans...    39   0.70
CP000152_1643(CP000152|pid:none) Burkholderia sp. 383 chromosome...    39   0.70
AM286415_1856(AM286415|pid:none) Yersinia enterocolitica subsp. ...    38   0.91
EF587159_1(EF587159|pid:none) Felis silvestris silvestris isolat...    38   0.91
CP000091_1031(CP000091|pid:none) Ralstonia eutropha JMP134 chrom...    38   0.91
CP000560_2665(CP000560|pid:none) Bacillus amyloliquefaciens FZB4...    38   0.91
CP000478_3073(CP000478|pid:none) Syntrophobacter fumaroxidans MP...    38   1.2
CU914166_712(CU914166|pid:none) Ralstonia solanacearum strain IP...    37   1.6
EF587093_1(EF587093|pid:none) Felis silvestris isolate Fca4427 N...    37   1.6
CP000139_3978(CP000139|pid:none) Bacteroides vulgatus ATCC 8482,...    37   1.6
CP000011_685(CP000011|pid:none) Burkholderia mallei ATCC 23344 c...    37   1.6
EF587054_1(EF587054|pid:none) Felis silvestris isolate Fca2486 N...    37   1.6
CP000125_2431(CP000125|pid:none) Burkholderia pseudomallei 1710b...    37   1.6
EF587127_1(EF587127|pid:none) Felis silvestris isolate Fca604 NA...    37   2.0
AP009049_574(AP009049|pid:none) Clostridium kluyveri NBRC 12016 ...    37   2.0
AF303110_11(AF303110|pid:none) Ursus arctos mitochondrion, compl...    37   2.0
EU497665_11(EU497665|pid:none) Ursus arctos mitochondrion, compl...    37   2.0
EF587057_1(EF587057|pid:none) Felis silvestris isolate Fca2640 N...    37   2.0
BX571966_825(BX571966|pid:none) Burkholderia pseudomallei strain...    37   2.0
AY035262_1(AY035262|pid:none) Panthera pardus isolate JAP1 NADH ...    37   2.6
AF303111_11(AF303111|pid:none) Ursus maritimus mitochondrion, co...    37   2.6
EU294167_11(EU294167|pid:none) Shigella dysenteriae O antigen ge...    37   2.6
EU294168_11(EU294168|pid:none) Escherichia coli serotype O150 O ...    37   2.6
AF006400_1(AF006400|pid:none) Felis nigripes NADH dehydrogenase ...    37   2.6
EF587107_1(EF587107|pid:none) Felis silvestris isolate Fca4902 N...    36   3.5
CP000085_1587(CP000085|pid:none) Burkholderia thailandensis E264...    36   3.5
EF587169_1(EF587169|pid:none) Felis silvestris silvestris isolat...    36   3.5
EF587126_1(EF587126|pid:none) Felis silvestris isolate Fca5044 N...    36   3.5
EF587071_1(EF587071|pid:none) Felis silvestris isolate Fca4159 N...    36   3.5
EF587120_1(EF587120|pid:none) Felis silvestris isolate Fca5020 N...    36   3.5
EF587102_1(EF587102|pid:none) Felis silvestris isolate Fca4862 N...    36   3.5
EF587099_1(EF587099|pid:none) Felis silvestris isolate Fca4473 N...    36   3.5
EF587022_1(EF587022|pid:none) Felis silvestris caffra isolate Fl...    36   3.5
EF587125_1(EF587125|pid:none) Felis silvestris isolate Fca5042 N...    36   3.5
EF587045_1(EF587045|pid:none) Felis silvestris isolate Fca1539 N...    36   3.5
AF006402_1(AF006402|pid:none) Felis silvestris NADH dehydrogenas...    36   3.5
EF587094_1(EF587094|pid:none) Felis silvestris isolate Fca4431 N...    36   3.5
EF587039_1(EF587039|pid:none) Felis silvestris isolate DB010 NAD...    36   3.5
EF587111_1(EF587111|pid:none) Felis silvestris isolate Fca4923 N...    36   3.5
EF587016_1(EF587016|pid:none) Felis silvestris caffra isolate Fl...    36   3.5
EF587166_1(EF587166|pid:none) Felis silvestris silvestris isolat...    36   3.5
AP009180_24(AP009180|pid:none) Candidatus Carsonella ruddii PV D...    36   3.5
EF587175_1(EF587175|pid:none) Felis silvestris silvestris isolat...    36   3.5
EF587168_1(EF587168|pid:none) Felis silvestris silvestris isolat...    36   3.5
EF587140_1(EF587140|pid:none) Felis silvestris isolate Fsi239gap...    36   3.5
EF587118_1(EF587118|pid:none) Felis silvestris isolate Fca5000 N...    36   3.5
EF587084_1(EF587084|pid:none) Felis silvestris isolate Fca4264 N...    36   3.5
EF587077_1(EF587077|pid:none) Felis silvestris isolate Fca4196 N...    36   3.5
BA000043_3461(BA000043|pid:none) Geobacillus kaustophilus HTA426...    36   3.5
EF587026_1(EF587026|pid:none) Felis silvestris ornata isolate Fc...    36   3.5
EF587152_1(EF587152|pid:none) Felis silvestris isolate Fsx372 NA...    36   3.5
EF587146_1(EF587146|pid:none) Felis silvestris isolate Fsi50 NAD...    36   3.5
EF587095_1(EF587095|pid:none) Felis silvestris isolate Fca4433 N...    36   3.5
EF587162_1(EF587162|pid:none) Felis silvestris silvestris isolat...    36   3.5
EF587049_1(EF587049|pid:none) Felis silvestris isolate Fca2109 N...    36   3.5
EF587108_1(EF587108|pid:none) Felis silvestris isolate Fca4906 N...    36   3.5
EF587086_1(EF587086|pid:none) Felis silvestris isolate Fca4296 N...    36   3.5
EF587092_1(EF587092|pid:none) Felis silvestris isolate Fca4426 N...    36   3.5
EF587176_1(EF587176|pid:none) Felis silvestris silvestris isolat...    36   3.5
EF587167_1(EF587167|pid:none) Felis silvestris silvestris isolat...    36   3.5
AM286745_13(AM286745|pid:none) Xenos vesparum partial mitochondr...    36   4.5
EF587029_1(EF587029|pid:none) Felis silvestris ornata isolate Fs...    36   4.5
AF006444_1(AF006444|pid:none) Panthera pardus NADH dehydrogenase...    36   4.5
CP001111_405(CP001111|pid:none) Stenotrophomonas maltophilia R55...    36   4.5
EU128495_1(EU128495|pid:none) Tribolium castaneum vasopressin/ox...    36   4.5
AF288092_34(AF288092|pid:none) Naegleria gruberi mitochondrial D...    36   4.5
AP009386_1040(AP009386|pid:none) Burkholderia multivorans ATCC 1...    36   4.5
EF587031_1(EF587031|pid:none) Felis silvestris ornata isolate Fl...    36   4.5
AJ428577_11(AJ428577|pid:none) Ursus maritimus complete mitochon...    36   4.5
AE016825_1138(AE016825|pid:none) Chromobacterium violaceum ATCC ...    36   4.5
AM039952_656(AM039952|pid:none) Xanthomonas campestris pv. vesic...    35   5.9
AE006641_1506(AE006641|pid:none) Sulfolobus solfataricus P2, com...    35   5.9
AJ271051_3(AJ271051|pid:none) Schistosoma haematobium partial mi...    35   5.9
CP001185_766(CP001185|pid:none) Thermosipho africanus TCF52B, co...    35   5.9
EF587020_1(EF587020|pid:none) Felis silvestris caffra isolate Fl...    35   5.9
CU928162_4914(CU928162|pid:none) Escherichia coli ED1a chromosom...    35   5.9
CP001638_3085(CP001638|pid:none) Geobacillus sp. WCH70, complete...    35   5.9
AF006438_1(AF006438|pid:none) Prionailurus bengalensis NADH dehy...    35   5.9
DQ364229_13(DQ364229|pid:none) Xenos vesparum mitochondrion, par...    35   5.9
CP000970_4492(CP000970|pid:none) Escherichia coli SMS-3-5, compl...    35   5.9
CP000708_1671(CP000708|pid:none) Brucella ovis ATCC 25840 chromo...    35   7.7
AF006450_1(AF006450|pid:none) Uncia uncia NADH dehydrogenase sub...    35   7.7
AP006716_335(AP006716|pid:none) Staphylococcus haemolyticus JCSC...    35   7.7
AF006404_1(AF006404|pid:none) Galidia elegans NADH dehydrogenase...    35   7.7
EF587265_11(EF587265|pid:none) Ursus thibetanus thibetanus mitoc...    35   7.7
AB3273(AB3273) ammonium transporter BMEI0167 [imported] - Brucel...    35   7.7
AY601891_2(AY601891|pid:none) Calophya schini cytochrome b (cytB...    35   7.7
CP000615_1536(CP000615|pid:none) Burkholderia vietnamiensis G4 c...    35   7.7
AF006434_1(AF006434|pid:none) Profelis aurata NADH dehydrogenase...    35   7.7

>AB024528_10(AB024528|pid:none) Halocynthia roretzi mitochondrial
           DNA, complete genome.
          Length = 551

 Score = 41.6 bits (96), Expect = 0.082
 Identities = 51/226 (22%), Positives = 95/226 (42%), Gaps = 26/226 (11%)
 Frame = +3

Query: 207 YSVNAYPNNFVQPYYQTDKIFVINGMGNPTAAGGNLSNLKYSKFAQISENFTFIL----R 374
           YS  A+ +  +  +++   + V   M +      +L  L + +       F  IL
Sbjct: 316 YSYLAFFHVLMHAFFKAMFLMVSGEMIHARQNIQDLRELGHGELMMKRPGFLLILGSGVM 375

Query: 375 MLVFPMIAVFFSVLLPLSKPYGGFLLGWEYTIMYIPVI-TCFISFFIV-------GWAQI 530
           M+ FP ++ FF+  L +   +GGFL  W + +    V+ TC  S +I+       GW
Sbjct: 376 MMGFPFLSGFFTKDLVMESFFGGFLNRWVFFLFLFSVLFTCGYSTWIIGKMLISWGWGCS 435

Query: 531 FCKGIKSWLLPMAI---HILLVS---VTFSCITQYSESY-------PPPVVIGVSYGMSA 671
              G++  L P  +   ++L +    + +  +  ++ESY        P ++ GV     A
Sbjct: 436 VVLGMEGMLGPFFLYRPYLLAICGGVLVWGWMGDFAESYVVCLVKVGPLIIFGVGSFCGA 495

Query: 672 SVLPALLYLKSAERFNWGFFIDFLH-FMLFMVIVIATIFLCVTFVI 806
            ++     L S   F  GFF   +H FM+++  V +   L   ++I
Sbjct: 496 LLVLWRAQLVSGFAFYLGFFNPLVHKFMIYLSQVWSFFSLYCDYLI 541

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 2,435,128,340
Number of extensions: 49982862
Number of successful extensions: 128233
Number of sequences better than 10.0: 99
Number of HSP's gapped: 128022
Number of HSP's successfully gapped: 99
Length of query: 527
Length of database: 1,051,180,864
Length adjustment: 133
Effective length of query: 394
Effective length of database: 620,718,517
Effective search space: 244563095698
Effective search space used: 244563095698
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
PSORT 

 psg: 0.75  gvh: 0.47  alm: 0.12  top: 0.47  tms: 0.67  mit: 0.17  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 1.00  m3b: 0.00  m_ : 0.00 

	 84.0 %: plasma membrane
	 16.0 %: endoplasmic reticulum

>> prediction for Contig-U15244-1 is pla
VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 2
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0