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Dicty_cDB
Contig List | Clone List | cDNA Library List
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NBDC - LSDB Archive
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Dicty_cDB
Contig List | Clone List | cDNA Library List
Atlas
Atlas | Atlas Image List
Contig-U03082-1
Contig ID Contig-U03082-1
Contig update 2001. 8.29
Contig sequence 
>Contig-U03082-1 (Contig-U03082-1Q) /CSM_Contig/Contig-U03082-1Q.Seq.d
ACACAAAACAGAAAACTNAGATAACAAAAAAAATAAATTATAAAAATGTT
TAAAATATTATTTGGTTTTATACCTTCAATAATTAAAACATTTAGTAATT
TTAAGAATATGAATGATATTTATCAAAATTTACAACATCAACAAAAAAAT
GTTTCATTATTTCATTTAGGACATTGGGTTAGAATAAAAGTTGGTGGTCA
ACCATTCATTGTTAGAAGGAAAACATTAAATAAATATAGTGACTCAATAT
TATCAGGTATAGCACATGATGATAAAATTACAACTAAAACAATCACTGAA
ATTTTATCAAAACCATCATCAATGTTTGAAAATATGTTTGATGATAATCA
ACCACCGCCACCACTACCAAATAATAAAAATTCAAAGCCTCCACCCACTA
GCGAAAATGAATTAAAGTCAATCAAAAAACAAGATTTAGAATACCAAGAA
ACTCATAAAAATTTACCAACTATTGTAGAAACAACAACATCAGAATCATC
ATCATCATCAAGTAATAATAAAAATGAAGTTGAAGAACAAATTGAAATTG
AAAAAAAGAAATATTATAATAATATTCATAATTTACAAAGTGGTGTTAAT
TTTCAACATGGTGAGAATGATGAATTTGAAACATCAATAAATAATGAAAC
TGGAGAAAAGAAATTTAAATTTGAAAAAGATCATGATGGATTTTACTTAA
TTGATAGAGATCCTGTTTATTTCAATGTAATTTTAAACTTTTTAAGAACT
GGTGTTATCACAATACCACCCTCGTTAGATATTAAATGTTTAATTGCTGA
TTCAAAATTTTATAGATTAAATGAATTAGAATTATTTTTAAATGATAGAG
TTTTAGAAGAAAGAAGAAATTTAGAAAGATTAGAGATATTAAAGAATGAA
TTTAATCAAGTTTCAAGTTCAATTAATAATAAAGTTAATAATAGTACTAA
TGAAATTTATTTTATATTACCAATGAATTGGTTTGTTGAATGGAAACGAT
TCATTGATGGTAGTAATTTACCACCAACTTCAAATATAGTTACAACTAGT
TTCTTTAAAACAATTGATGGTCTTCCAATTCACCAATTAAAAGATAATTT
ACAATTAGATTCTGATTACATTTGTATCTCAAAAGAAACATTTCTAGCTT
TCAATAAATTCTTATANANCGGTTGGTCCAATAATTATGAGACAAACTAA
AAANATTTACNAAANCCACCATATCNATTTTATCTTCAAAAATTGGAAAT
NNAAAAAAA
Gap no gap
Contig length 1259
Chromosome number (1..6, M) 2
Chromosome length 8467578
Start point 4653676
End point 4652412
Strand (PLUS/MINUS) MINUS
Number of clones 2
Number of EST 3
Link to clone list U03082
List of clone(s) 

est1=CFA640F,1,590
est2=VSG542F,245,744
est3=CFA640Z,552,1260
Translated Amino Acid sequence 
tqnrklr*qkk*IIKMFKILFGFIPSIIKTFSNFKNMNDIYQNLQHQQKNVSLFHLGHWV
RIKVGGQPFIVRRKTLNKYSDSILSGIAHDDKITTKTITEILSKPSSMFENMFDDNQPPP
PLPNNKNSKPPPTSENELKSIKKQDLEYQETHKNLPTIVETTTSESSSSSSNNKNEVEEQ
IEIEKKKYYNNIHNLQSGVNFQHGENDEFETSINNETGEKKFKFEKDHDGFYLIDRDPVY
FNVILNFLRTGVITIPPSLDIKCLIADSKFYRLNELELFLNDRVLEERRNLERLEILKNE
FNQVSSSINNKVNNSTNEIYFILPMNWFVEWKRFIDGSNLPPTSNIVTTSFFKTIDGLPI
HQLKDNLQLDSDYICISKETFLAFNKFLXXGWSNNYETN*kxlxxppyxfylqklexxk
Translated Amino Acid sequence (All Frames) 
Frame A:
tqnrklr*qkk*IIKMFKILFGFIPSIIKTFSNFKNMNDIYQNLQHQQKNVSLFHLGHWV
RIKVGGQPFIVRRKTLNKYSDSILSGIAHDDKITTKTITEILSKPSSMFENMFDDNQPPP
PLPNNKNSKPPPTSENELKSIKKQDLEYQETHKNLPTIVETTTSESSSSSSNNKNEVEEQ
IEIEKKKYYNNIHNLQSGVNFQHGENDEFETSINNETGEKKFKFEKDHDGFYLIDRDPVY
FNVILNFLRTGVITIPPSLDIKCLIADSKFYRLNELELFLNDRVLEERRNLERLEILKNE
FNQVSSSINNKVNNSTNEIYFILPMNWFVEWKRFIDGSNLPPTSNIVTTSFFKTIDGLPI
HQLKDNLQLDSDYICISKETFLAFNKFLXXGWSNNYETN*kxlxxppyxfylqklexxk


Frame B:
hktenxdnkknkl*kclkyylvlylq*lkhlvilri*mifikiyninkkmfhyfi*digl
e*klvvnhsllegkh*inivtqyyqv*hmmiklqlkqslkfyqnhhqclkiclmiinhrh
hyqiikiqslhplakmn*sqsknki*ntkklikiyqll*kqqhqnhhhhqviikmklknk
lklkkrniiiifiiykvvlifnmvrmmnlkhq*imklekrnlnlkkimmdft*lieilfi
sm*f*tf*elvlsqyhpr*ilnv*lliqnfid*mn*nyf*mief*kkeei*kd*ry*rmn
likfqvqliikliivlmkfilyyq*igllngndslmvviyhqlqi*lqlvslkqlmvfqf
tn*kiiyn*ilitfvsqkkhf*lsinsyxxvgpiimrqtkxiyxxhhixfifknwkxkk


Frame C:
tkqktxitkkinyknv*niiwfytfnn*ni**f*eye*ylskfttstkkcfiisfrtlg*
nkswwstihc*kenik*i**lniiryst***nyn*nnh*nfiktiinv*kyv***sttat
ttk**kfkasth*rk*ikvnqktrfriprns*kftnycrnnniriiiiik***k*s*rtn
*n*kkeil**ys*ftkwc*fstw*e**i*nink**nwrkei*i*krs*willn**rsclf
qcnfklfknwcyhnttlvry*mfnc*fkil*ik*iriifk**sfrrkkkfrkirdike*i
*ssfkfn***s***y**nlfyitnelvc*metih*w**fttnfkysyn*fl*nn*wssns
pikr*ftirf*lhlylkrnissfq*ilixrlvq*l*dklkxftkxtisilsskignxkk
own update 2004. 6. 9
Homology vs CSM-cDNA 
Query= Contig-U03082-1 (Contig-U03082-1Q)
/CSM_Contig/Contig-U03082-1Q.Seq.d
         (1259 letters)

Database: CSM
           6905 sequences; 5,674,871 total letters


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

Contig-U03082-1 (Contig-U03082-1Q) /CSM_Contig/Conti...  2305  0.0
Contig-U09935-1 (Contig-U09935-1Q) /CSM_Contig/Conti...    46  9e-05
Contig-U07546-1 (Contig-U07546-1Q) /CSM_Contig/Conti...    46  9e-05
Contig-U14875-1 (Contig-U14875-1Q) /CSM_Contig/Conti...    44  4e-04
Contig-U13162-1 (Contig-U13162-1Q) /CSM_Contig/Conti...    44  4e-04
Contig-U14787-1 (Contig-U14787-1Q) /CSM_Contig/Conti...    42  0.001
Contig-U14190-1 (Contig-U14190-1Q) /CSM_Contig/Conti...    42  0.001
Contig-U11908-1 (Contig-U11908-1Q) /CSM_Contig/Conti...    42  0.001
Contig-U11680-1 (Contig-U11680-1Q) /CSM_Contig/Conti...    42  0.001
Contig-U10126-1 (Contig-U10126-1Q) /CSM_Contig/Conti...    36  0.089

>Contig-U03082-1 (Contig-U03082-1Q) /CSM_Contig/Contig-U03082-1Q.Seq.d
          Length = 1259

 Score = 2305 bits (1163), Expect = 0.0
 Identities = 1228/1250 (98%)
 Strand = Plus / Plus

                                                                        
Query: 1    acacaaaacagaaaactnagataacnnnnnnnntaaattataaaaatgtttaaaatatta 60
            |||||||||||||||||||||||||        |||||||||||||||||||||||||||
Sbjct: 1    acacaaaacagaaaactnagataacaaaaaaaataaattataaaaatgtttaaaatatta 60

                                                                        
Query: 61   tttggttttataccttcaataattaaaacatttagtaattttaagaatatgaatgatatt 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   tttggttttataccttcaataattaaaacatttagtaattttaagaatatgaatgatatt 120

                                                                        
Query: 121  tatcaaaatttacaacatcaacnnnnnnntgtttcattatttcatttaggacattgggtt 180
            ||||||||||||||||||||||       |||||||||||||||||||||||||||||||
Sbjct: 121  tatcaaaatttacaacatcaacaaaaaaatgtttcattatttcatttaggacattgggtt 180

                                                                        
Query: 181  agaataaaagttggtggtcaaccattcattgttagaaggaaaacattaaataaatatagt 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181  agaataaaagttggtggtcaaccattcattgttagaaggaaaacattaaataaatatagt 240

                                                                        
Query: 241  gactcaatattatcaggtatagcacatgatgataaaattacaactaaaacaatcactgaa 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241  gactcaatattatcaggtatagcacatgatgataaaattacaactaaaacaatcactgaa 300

                                                                        
Query: 301  attttatcaaaaccatcatcaatgtttgaaaatatgtttgatgataatcaaccaccgcca 360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301  attttatcaaaaccatcatcaatgtttgaaaatatgtttgatgataatcaaccaccgcca 360

                                                                        
Query: 361  ccactaccaaataataaaaattcaaagcctccacccactagcgaaaatgaattaaagtca 420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361  ccactaccaaataataaaaattcaaagcctccacccactagcgaaaatgaattaaagtca 420

                                                                        
Query: 421  atcaaaaaacaagatttagaataccaagaaactcataaaaatttaccaactattgtagaa 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421  atcaaaaaacaagatttagaataccaagaaactcataaaaatttaccaactattgtagaa 480

                                                                        
Query: 481  acaacaacatcagaatcatcatcatcatcaagtaataataaaaatgaagttgaagaacaa 540
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481  acaacaacatcagaatcatcatcatcatcaagtaataataaaaatgaagttgaagaacaa 540

                                                                        
Query: 541  attgaaattgnnnnnnngaaatattataataatattcataatttacaaagtggtgttaat 600
            ||||||||||       |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541  attgaaattgaaaaaaagaaatattataataatattcataatttacaaagtggtgttaat 600

                                                                        
Query: 601  tttcaacatggtgagaatgatgaatttgaaacatcaataaataatgaaactggagaaaag 660
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601  tttcaacatggtgagaatgatgaatttgaaacatcaataaataatgaaactggagaaaag 660

                                                                        
Query: 661  aaatttaaatttgaaaaagatcatgatggattttacttaattgatagagatcctgtttat 720
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661  aaatttaaatttgaaaaagatcatgatggattttacttaattgatagagatcctgtttat 720

                                                                        
Query: 721  ttcaatgtaattttaaactttttaagaactggtgttatcacaataccaccctcgttagat 780
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721  ttcaatgtaattttaaactttttaagaactggtgttatcacaataccaccctcgttagat 780

                                                                        
Query: 781  attaaatgtttaattgctgattcaaaattttatagattaaatgaattagaattattttta 840
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781  attaaatgtttaattgctgattcaaaattttatagattaaatgaattagaattattttta 840

                                                                        
Query: 841  aatgatagagttttagaagaaagaagaaatttagaaagattagagatattaaagaatgaa 900
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841  aatgatagagttttagaagaaagaagaaatttagaaagattagagatattaaagaatgaa 900

                                                                        
Query: 901  tttaatcaagtttcaagttcaattaataataaagttaataatagtactaatgaaatttat 960
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901  tttaatcaagtttcaagttcaattaataataaagttaataatagtactaatgaaatttat 960

                                                                        
Query: 961  tttatattaccaatgaattggtttgttgaatggaaacgattcattgatggtagtaattta 1020
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961  tttatattaccaatgaattggtttgttgaatggaaacgattcattgatggtagtaattta 1020

                                                                        
Query: 1021 ccaccaacttcaaatatagttacaactagtttctttaaaacaattgatggtcttccaatt 1080
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 ccaccaacttcaaatatagttacaactagtttctttaaaacaattgatggtcttccaatt 1080

                                                                        
Query: 1081 caccaattaaaagataatttacaattagattctgattacatttgtatctcaaaagaaaca 1140
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 caccaattaaaagataatttacaattagattctgattacatttgtatctcaaaagaaaca 1140

                                                                        
Query: 1141 tttctagctttcaataaattcttatanancggttggtccaataattatgagacaaactaa 1200
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 tttctagctttcaataaattcttatanancggttggtccaataattatgagacaaactaa 1200

                                                              
Query: 1201 aaanatttacnaaanccaccatatcnattttatcttcaaaaattggaaat 1250
            ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 aaanatttacnaaanccaccatatcnattttatcttcaaaaattggaaat 1250


>Contig-U09935-1 (Contig-U09935-1Q) /CSM_Contig/Contig-U09935-1Q.Seq.d
          Length = 1525

 Score = 46.1 bits (23), Expect = 9e-05
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 495 atcatcatcatcatcaagtaataataa 521
           ||||||||||||||||| |||||||||
Sbjct: 152 atcatcatcatcatcaaataataataa 178


 Score = 32.2 bits (16), Expect = 1.4
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                           
Query: 495 atcatcatcatcatca 510
           ||||||||||||||||
Sbjct: 149 atcatcatcatcatca 164


>Contig-U07546-1 (Contig-U07546-1Q) /CSM_Contig/Contig-U07546-1Q.Seq.d
          Length = 1050

 Score = 46.1 bits (23), Expect = 9e-05
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 480 aacaacaacatcagaatcatcatcatcatca 510
           |||||||||||||  ||||||||||||||||
Sbjct: 21  aacaacaacatcatcatcatcatcatcatca 51


  Database: CSM
    Posted date:  Jun 9, 2004  7:35 PM
  Number of letters in database: 5,674,871
  Number of sequences in database:  6905
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 40,774
Number of Sequences: 6905
Number of extensions: 40774
Number of successful extensions: 6599
Number of sequences better than 10.0: 861
length of query: 1259
length of database: 5,674,871
effective HSP length: 16
effective length of query: 1243
effective length of database: 5,564,391
effective search space: 6916538013
effective search space used: 6916538013
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2009. 5.25
Homology vs DNA 
Query= Contig-U03082-1 (Contig-U03082-1Q) /CSM_Contig/Contig-U03082-1Q.Seq.d
         (1259 letters)

Database: ddbj_A
           102,105,510 sequences; 101,790,757,118 total letters

Searching..................................................done

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(BJ373270) Dictyostelium discoideum cDNA clone:ddc2o10, 3' e...   650   0.0    2
(AC116956) Dictyostelium discoideum chromosome 2 map 1418423...   507   0.0    5
(AU266609) Dictyostelium discoideum vegetative cDNA clone:VS...   607   0.0    2
(BJ359777) Dictyostelium discoideum cDNA clone:ddc2o10, 5' e...   795   0.0    4
(AC117176) Dictyostelium discoideum chromosome 2 map 5018074...    34   6e-08  18
(AC116979) Dictyostelium discoideum chromosome 2 map 6445720...    38   9e-07  17
(AC117070) Dictyostelium discoideum chromosome 2 map 2097701...    44   6e-06  13
(AC116986) Dictyostelium discoideum chromosome 2 map 2234041...    34   2e-05  17
(AC115598) Dictyostelium discoideum chromosome 2 map 581427-...    38   8e-05  12
(AL844506) Plasmodium falciparum chromosome  7.                    36   2e-04  15
(AE017308) Mycoplasma mobile 163K complete genome.                 34   3e-04  24
(AL844501) Plasmodium falciparum strain 3D7, chromosome 1.         36   3e-04  18
(DY890581) CeleSEQ9635 Cunninghamella elegans pBluescript (E...    40   4e-04  4
(AC116305) Dictyostelium discoideum chromosome 2 map 1005175...    34   4e-04  19
(AE014837) Plasmodium falciparum 3D7 chromosome 11 section 2...    36   4e-04  15
(AC116984) Dictyostelium discoideum chromosome 2 map 2567470...    46   7e-04  16
(EH015746) USDA-FP_188316 Lysiphlebus testaceipes adult whol...    42   8e-04  3
(AC178481) Strongylocentrotus purpuratus clone R3-113F05, WO...    38   8e-04  8
(AL844507) Plasmodium falciparum chromosome 8.                     40   9e-04  17
(AC116977) Dictyostelium discoideum chromosome 2 map 5515173...    38   9e-04  14
(AC180369) Strongylocentrotus purpuratus clone R3-3116D23, W...    32   0.001  9
(AC116551) Dictyostelium discoideum chromosome 2 map complem...    38   0.001  13
(AC116963) Dictyostelium discoideum chromosome 2 map 4657875...    40   0.002  18
(CR388093) Zebrafish DNA sequence from clone CH211-279L9 in ...    42   0.002  5
(CR376832) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    42   0.002  5
(CP001184) Ureaplasma urealyticum serovar 10 str. ATCC 33699...    38   0.002  21
(AC123513) Dictyostelium discoideum strain AX4 chromosome 2 ...    36   0.002  9
(AF063866) Melanoplus sanguinipes entomopoxvirus, complete g...    36   0.002  13
(AC116960) Dictyostelium discoideum chromosome 2 map complem...    38   0.003  12
(AC232863) Solanum lycopersicum chromosome 6 clone C06SLm000...    36   0.003  8
(AC164168) Mus musculus 6 BAC RP23-343D21 (Roswell Park Canc...    56   0.003  1
(AC155659) Mus musculus 6 BAC RP24-68F17 (Roswell Park Cance...    56   0.003  1
(AZ721882) RPCI-24-140F20.TJ RPCI-24 Mus musculus genomic cl...    56   0.003  1
(AC116982) Dictyostelium discoideum chromosome 2 map 3622643...    46   0.004  14
(CP000123) Mycoplasma capricolum subsp. capricolum ATCC 2734...    32   0.006  21
(FM992695) Candida dubliniensis CD36 chromosome R, complete ...    34   0.006  18
(CT009655) Medicago truncatula chromosome 5 clone mth2-121g1...    38   0.007  8
(AE014821) Plasmodium falciparum 3D7 chromosome 14 section 6...    34   0.009  14
(EU439810) Asteromyia euthamiae isolate 23eugraMA cytochrome...    38   0.009  4
(EU439782) Asteromyia euthamiae isolate 1105euegrNY cytochro...    38   0.009  4
(AL844509) Plasmodium falciparum chromosome 13.                    38   0.010  11
(AL035477) Plasmodium falciparum MAL4P4.                           34   0.015  15
(AC005507) Plasmodium falciparum chromosome 12 clone PFYACB8...    36   0.016  11
(EJ611664) 1092962049694 Global-Ocean-Sampling_GS-29-01-01-1...    42   0.018  2
(AC116330) Dictyostelium discoideum chromosome 2 map 3191214...    34   0.020  13
(AC005506) Plasmodium falciparum chromosome 12 clone PFYAC35...    34   0.022  11
(AF538053) Monosiga brevicollis mitochondrion, complete genome.    34   0.022  11
(AE017263) Mesoplasma florum L1 complete genome.                   36   0.023  22
(AC184290) Strongylocentrotus purpuratus clone R3-61K5, WORK...    48   0.027  8
(AL929352) Plasmodium falciparum strain 3D7, chromosome 5, s...    34   0.027  13
(CP000084) Candidatus Pelagibacter ubique HTCC1062, complete...    34   0.028  21
(AC117081) Dictyostelium discoideum chromosome 2 map 5862124...    36   0.028  14
(CP001056) Clostridium botulinum B str. Eklund 17B, complete...    36   0.032  21
(EG417430) SAAH-aab61b08.b1 Agen 0058 Schmidtea mediterranea...    36   0.034  3
(AC181482) Strongylocentrotus purpuratus clone R3-1111H14, W...    36   0.034  7
(AE009951) Fusobacterium nucleatum subsp. nucleatum ATCC 255...    34   0.034  21
(AE014849) Plasmodium falciparum 3D7 chromosome 12, section ...    36   0.034  12
(AC115684) Dictyostelium discoideum chromosome 2 map 3108975...    32   0.038  11
(BJ422859) Dictyostelium discoideum cDNA clone:ddv47c09, 5' ...    42   0.043  2
(BJ418646) Dictyostelium discoideum cDNA clone:ddv33c15, 5' ...    42   0.043  2
(AC073205) Homo sapiens BAC clone RP11-323K15 from 7, comple...    34   0.048  11
(AC155050) Bos taurus clone CH240-26N11, WORKING DRAFT SEQUE...    52   0.053  1
(CU407301) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    52   0.053  1
(AG348480) Mus musculus molossinus DNA, clone:MSMg01-144G09....    52   0.053  1
(FC616969) CAXS8570.fwd CAXS Lottia gigantea from head, foot...    52   0.053  1
(FC616968) CAXS8570.rev CAXS Lottia gigantea from head, foot...    52   0.053  1
(FM992690) Candida dubliniensis CD36 chromosome 3, complete ...    46   0.059  12
(AG359632) Mus musculus molossinus DNA, clone:MSMg01-159M14....    48   0.061  2
(AG580440) Mus musculus molossinus DNA, clone:MSMg01-505O17....    48   0.061  2
(AC117072) Dictyostelium discoideum chromosome 2 map 3879572...    38   0.064  13
(AC187309) Canis familiaris chromosome 2, clone XX-83E16, co...    36   0.076  8
(AC188761) Callithrix jacchus BAC clone CH259-81H12 from chr...    44   0.077  4
(AC181881) Strongylocentrotus purpuratus clone R3-1018M11, W...    38   0.078  5
(AM451170) Vitis vinifera contig VV78X264500.17, whole genom...    30   0.078  8
(AC116957) Dictyostelium discoideum chromosome 2 map 1685067...    38   0.081  10
(AE014839) Plasmodium falciparum 3D7 chromosome 11 section 4...    32   0.082  13
(AE014845) Plasmodium falciparum 3D7 chromosome 12, section ...    36   0.083  13
(AC201133) Strongylocentrotus purpuratus clone R3-14A9, WORK...    38   0.088  5
(AE014816) Plasmodium falciparum 3D7 chromosome 14 section 1...    32   0.092  12
(AL929355) Plasmodium falciparum strain 3D7, chromosome 9; s...    34   0.11   14
(AC004157) Plasmodium falciparum chromosome 12 clone PFYAC29...    36   0.12   11
(CP000727) Clostridium botulinum A str. Hall, complete genome.     36   0.12   18
(AB136216) Homo sapiens DNA, STS on chromosome 2, D2S0190i, ...    38   0.12   2
(DJ450855) Method for analysing genome using microsatellite ...    38   0.12   2
(CT030036) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    34   0.13   2
(CU076052) Zebrafish DNA sequence from clone CH73-167H5 in l...    34   0.13   2
(CU570884) Zebrafish DNA sequence from clone CH73-201B6 in l...    36   0.13   8
(EI155685) DH019L06_R8.ab1 Brachypodium distachyon Bd21 Hind...    38   0.14   3
(AC117076) Dictyostelium discoideum chromosome 2 map 3323568...    34   0.16   9
(EJ850219) 1093017877743 Global-Ocean-Sampling_GS-30-02-01-1...    40   0.16   2
(EJ928572) 1093018793641 Global-Ocean-Sampling_GS-30-02-01-1...    40   0.16   2
(CP000726) Clostridium botulinum A str. ATCC 19397, complete...    36   0.16   18
(AC179709) Strongylocentrotus purpuratus clone R3-1021H16, W...    34   0.16   7
(EH014645) USDA-FP_187325 Lysiphlebus testaceipes adult whol...    40   0.16   2
(EJ906962) 1093018518275 Global-Ocean-Sampling_GS-30-02-01-1...    34   0.16   3
(BX293980) Mycoplasma mycoides subsp. mycoides SC str. PG1, ...    40   0.17   18
(EJ803937) 1093017446343 Global-Ocean-Sampling_GS-30-02-01-1...    34   0.17   3
(EF368011) Hexamermis agrotis mitochondrion, complete genome.      36   0.19   5
(AC114263) Dictyostelium discoideum chromosome 2 map 215673-...    36   0.19   9
(CP000976) Borrelia duttonii Ly, complete genome.                  36   0.20   20
(AC147955) Dasypus novemcinctus clone VMRC5-208P2, WORKING D...    50   0.21   1
(AC201662) Strongylocentrotus purpuratus clone R3-3092P11, W...    50   0.21   1
(AC184435) Strongylocentrotus purpuratus clone R3-3094B2, WO...    50   0.21   1
(AC173189) Bos taurus clone CH240-178J23, WORKING DRAFT SEQU...    50   0.21   1
(AZ530610) ENTBD83TF Entamoeba histolytica Sheared DNA Entam...    50   0.21   1
(AZ142997) SP_0041_B1_B05_SP6E Strongylocentrotus purpuratus...    50   0.21   1
(ET695844) CHO_OF027xe06f1.ab1 CHO_OF Nicotiana tabacum geno...    50   0.21   1
(DW173932) CLVZ4939.b1_F12.ab1 CLV(XYZ) lettuce virosa Lactu...    50   0.21   1
(DW148858) CLVX14196.b1_H22.ab1 CLV(XYZ) lettuce virosa Lact...    50   0.21   1
(FG299958) 1108793351149 New World Screwworm Larvae 9387 EST...    50   0.21   1
(AP007664) Lotus japonicus genomic DNA, chromosome 1, clone:...    36   0.21   7
(CU469464) Candidatus Phytoplasma mali strain AT complete ch...    36   0.24   15
(AC231362) Medicago truncatula clone mth2-34c4, WORKING DRAF...    36   0.28   6
(ER556735) 1092351558668 Global-Ocean-Sampling_GS-36-01-01-2...    48   0.29   2
(AE014828) Plasmodium falciparum 3D7 chromosome 14 section 1...    32   0.29   15
(AC115599) Dictyostelium discoideum chromosome 2 map 4229098...    34   0.30   11
(AY653733) Acanthamoeba polyphaga mimivirus, complete genome.      34   0.34   22
(AC173213) Strongylocentrotus purpuratus clone R3-3065G23, W...    48   0.35   5
(CP000263) Buchnera aphidicola str. Cc (Cinara cedri), compl...    34   0.35   14
(AC190141) Pan troglodytes BAC clone CH251-443L3 from chromo...    34   0.37   10
(AC117075) Dictyostelium discoideum chromosome 2 map 5201047...    42   0.39   15
(U23477) Dictyostelium discoideum phosphatidylinositol-4,5-d...    46   0.40   2
(AL035475) Plasmodium falciparum MAL4P2.                           32   0.41   12
(AC135314) Medicago truncatula chromosome 8 clone mth2-26l3,...    40   0.42   8
(CP000246) Clostridium perfringens ATCC 13124, complete genome.    40   0.42   19
(AP009180) Candidatus Carsonella ruddii PV DNA, complete gen...    30   0.43   14
(AC210553) Populus trichocarpa clone POP073-N11, complete se...    36   0.44   5
(AC193250) Pan troglodytes BAC clone CH251-714K6 from chromo...    42   0.45   7
(ER513984) 1093015481726 Global-Ocean-Sampling_GS-35-01-01-1...    36   0.45   3
(AC177270) Strongylocentrotus purpuratus clone R3-43M15, WOR...    44   0.46   6
(CU929327) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    34   0.48   2
(AE014840) Plasmodium falciparum 3D7 chromosome 11 section 5...    34   0.48   14
(AM456750) Vitis vinifera, whole genome shotgun sequence, co...    36   0.50   2
(EU275726) Polysphondylium pallidum strain PN500 mitochondri...    36   0.54   6
(FP102123) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    34   0.56   10
(BX323451) Zebrafish DNA sequence from clone DKEY-49H9 in li...    38   0.59   5
(AC124215) Medicago truncatula clone mth2-32m6, complete seq...    36   0.60   9
(AC034261) Homo sapiens clone RP11-14M21, WORKING DRAFT SEQU...    36   0.60   6
(CT559285) A BAC library has been constructed from cultivar ...    36   0.60   2
(CE668269) tigr-gss-dog-17000329293507 Dog Library Canis lup...    34   0.60   2
(AC117267) Dictyostelium discoideum chromosome 2 map 5836255...    36   0.63   7
(AC234256) Solanum tuberosum chromosome 6 clone RHPOTKEY076E...    44   0.64   8
(AC168580) Strongylocentrotus purpuratus clone R3-3065H7, WO...    38   0.65   6
(BJ326175) Dictyostelium discoideum cDNA clone:dda15g14, 5' ...    38   0.68   2
(AE014824) Plasmodium falciparum 3D7 chromosome 14 section 9...    34   0.69   12
(EK381182) 1095469462228 Global-Ocean-Sampling_GS-31-01-01-1...    46   0.69   2
(BJ415823) Dictyostelium discoideum cDNA clone:ddv23i23, 5' ...    38   0.69   2
(FJ026858) Xylophanes balcazari voucher BC-Hax4325 cytochrom...    42   0.70   2
(FJ026857) Xylophanes balcazari voucher BC-Hax4326 cytochrom...    42   0.70   2
(FJ026856) Xylophanes balcazari voucher BC-Hax4327 cytochrom...    42   0.70   2
(AC151817) Medicago truncatula clone mth2-10f23, WORKING DRA...    38   0.71   5
(AC151527) Medicago truncatula clone mth2-135i19, complete s...    36   0.71   9
(BX470175) Zebrafish DNA sequence from clone DKEY-228K17 in ...    48   0.71   6
(AE017243) Mycoplasma hyopneumoniae J, complete genome.            32   0.72   19
(BJ326163) Dictyostelium discoideum cDNA clone:dda15c16, 5' ...    38   0.72   2
(AE014841) Plasmodium falciparum 3D7 chromosome 11 section 6...    34   0.74   12
(FJ026861) Xylophanes balcazari voucher BC-Hax0759 cytochrom...    42   0.75   2
(AE014846) Plasmodium falciparum 3D7 chromosome 12, section ...    36   0.75   12
(FJ026860) Xylophanes balcazari voucher BC-Hax0763 cytochrom...    42   0.76   2
(FJ026859) Xylophanes balcazari voucher BC-Hax0764 cytochrom...    42   0.76   2
(CA335774) NISC_lu03h02.y1 COGENE 4AR (4EAR) Homo sapiens cD...    40   0.76   2
(AC179894) Strongylocentrotus purpuratus clone R3-1006B17, W...    32   0.78   9
(AM412317) Clostridium botulinum A str. ATCC 3502 complete g...    36   0.81   17
(FM992693) Candida dubliniensis CD36 chromosome 6, complete ...    34   0.81   16
(BV947902) pRRL2:Newb:20080411:327733 USMARC Pig Breed SNP D...    42   0.82   2
(AM483263) Vitis vinifera contig VV78X047306.12, whole genom...    48   0.83   1
(EU488715) Ventridens ligera microsatellite VL10 sequence.         48   0.83   1
(AC198921) Monosiga brevicollis clone MonoB-5B15, complete s...    48   0.83   1
(AC130139) Rattus norvegicus clone CH230-27B13, WORKING DRAF...    48   0.83   1
(AC129616) Rattus norvegicus clone CH230-506P15, WORKING DRA...    48   0.83   1
(AC125989) Rattus norvegicus clone CH230-76E3, WORKING DRAFT...    48   0.83   1
(AC120332) Rattus norvegicus clone CH230-213A22, WORKING DRA...    48   0.83   1
(CU929754) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    48   0.83   1
(AC188842) Gossypium hirsutum chromosome UNKNOWN clone ZMMBB...    48   0.83   1
(AC181261) Strongylocentrotus purpuratus clone R3-115K17, WO...    48   0.83   1
(AC180183) Strongylocentrotus purpuratus clone R3-4001O12, W...    48   0.83   1
(AC180092) Strongylocentrotus purpuratus clone R3-4007M3, WO...    48   0.83   1
(AC178754) Strongylocentrotus purpuratus clone R3-16K15, WOR...    48   0.83   1
(AC177391) Strongylocentrotus purpuratus clone R3-53E22, WOR...    48   0.83   1
(EK251822) 1095460284352 Global-Ocean-Sampling_GS-31-01-01-1...    48   0.83   1
(DX569547) MUGQ_CH252P047D15T7_AV997_062 CHORI-252 Vervet Mo...    48   0.83   1
(EH016735) USDA-FP_189206 Lysiphlebus testaceipes adult whol...    48   0.83   1
(EH015027) USDA-FP_187669 Lysiphlebus testaceipes adult whol...    48   0.83   1
(EH013987) USDA-FP_186733 Lysiphlebus testaceipes adult whol...    48   0.83   1
(EH012137) USDA-FP_182107 Lysiphlebus testaceipes adult whol...    48   0.83   1
(EH010576) USDA-FP_183661 Lysiphlebus testaceipes adult whol...    48   0.83   1
(EE628584) CHEL10112.b1_P07.ab1 CHE(LMS) serpentine sunflowe...    48   0.83   1
(DY893318) CeleSEQ12623 Cunninghamella elegans pBluescript (...    48   0.83   1
(AU265508) Dictyostelium discoideum vegetative cDNA clone:VS...    48   0.83   1
(DB962732) Glycine max cDNA, clone: GMFL02-21-F01, 5'end.          48   0.83   1
(CO408751) Lr_CHECF_32E08_M13R Earthworm Head Enriched libra...    48   0.83   1
(GE105951) 454GmaGlobSeed848599 Soybean Seeds Containing Glo...    48   0.83   1
(FK498838) 454GmaGlobSeed233470 Soybean Seeds Containing Glo...    48   0.83   1
(FD989078) RR4GV18TF RR4(PB) Raphanus raphanistrum subsp. la...    48   0.83   1
(FD984903) RR4GV18JQ RR4(PB) Raphanus raphanistrum subsp. la...    48   0.83   1
(CT573510) Medicago truncatula chromosome 5 clone mth4-41f7,...    34   0.84   9
(CU481238) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    38   0.84   9
(AL845541) Mouse DNA sequence *** SEQUENCING CANCELLED *** f...    38   0.86   7
(DY885108) CeleSEQ299 Cunninghamella elegans pBluescript (Ec...    46   0.86   2
(AC174290) Medicago truncatula clone mth2-52e11, complete se...    36   0.89   6
(ER556128) 1093016324218 Global-Ocean-Sampling_GS-35-01-01-1...    42   0.89   2
(DY887566) CeleSEQ4010 Cunninghamella elegans pBluescript (E...    46   0.94   2
(AC178976) Strongylocentrotus purpuratus clone R3-3122C2, WO...    34   0.95   7
(CP000728) Clostridium botulinum F str. Langeland, complete ...    34   0.95   22
(AE016826) Buchnera aphidicola str. Bp (Baizongia pistaciae)...    34   0.96   18
(CU459062) S.lycopersicum DNA sequence from clone LE_HBa-75G...    36   0.96   7
(AC201538) Strongylocentrotus purpuratus clone R3-3096O24, W...    40   0.96   7
(AC199972) Cavia porcellus clone CH234-417D13, WORKING DRAFT...    38   1.0    7
(BJ426227) Dictyostelium discoideum cDNA clone:ddv58e12, 5' ...    34   1.0    3
(AC122722) Medicago truncatula chromosome 6 clone mth1-3f12,...    32   1.0    8
(AC116987) Dictyostelium discoideum chromosome 2 map 3527441...    32   1.1    9
(AC006281) Plasmodium falciparum chromosome 12 clone PFYACB8...    36   1.1    10
(AC181040) Strongylocentrotus purpuratus clone R3-3029B16, W...    34   1.1    7
(AC176301) Strongylocentrotus purpuratus clone R3-3055L23, W...    38   1.1    4
(BJ427834) Dictyostelium discoideum cDNA clone:ddv63b23, 5' ...    34   1.1    3
(AC178653) Strongylocentrotus purpuratus clone R3-3007J18, W...    40   1.2    4
(AC202347) Medicago truncatula clone mth2-31l19, WORKING DRA...    36   1.2    6
(CP000993) Borrelia recurrentis A1, complete genome.               32   1.2    20
(AJ812236) Dictyostelium discoideum mRNA for diaphanous-rela...    44   1.3    2
(CT033766) Medicago truncatula chromosome 5 clone mth4-42c9,...    34   1.3    10
(AE014825) Plasmodium falciparum 3D7 chromosome 14 section 1...    32   1.3    14
(AL034557) Plasmodium falciparum MAL4P1.                           34   1.3    14
(AC177084) Strongylocentrotus purpuratus clone R3-4004O16, W...    34   1.3    10
(AL096783) Plasmodium falciparum DNA *** SEQUENCING IN PROGR...    36   1.3    7
(BJ418962) Dictyostelium discoideum cDNA clone:ddv34i15, 5' ...    34   1.3    3
(CR382399) Plasmodium falciparum chromosome 6, complete sequ...    32   1.4    13
(AC168849) Medicago truncatula chromosome 8 clone mth2-69p13...    40   1.4    8
(BJ422623) Dictyostelium discoideum cDNA clone:ddv46e14, 5' ...    34   1.4    3
(AE014842) Plasmodium falciparum 3D7 chromosome 11 section 7...    32   1.4    14
(AP009253) Lotus japonicus genomic DNA, chromosome 1, clone:...    38   1.4    7
(AC099739) Oryza sativa Japonica Group chromosome 3 clone OJ...    36   1.4    4
(AC177455) Strongylocentrotus purpuratus clone R3-5M11, WORK...    36   1.4    6
(BX324140) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    34   1.5    8
(AP004338) Oryza sativa Japonica Group genomic DNA, chromoso...    38   1.5    4
(AC180497) Strongylocentrotus purpuratus clone R3-3099F5, WO...    36   1.5    7
(DH096007) Oryzias latipes Fosmid clone:GOLWFno181_b04, forw...    38   1.5    2
(AC116920) Dictyostelium discoideum chromosome 2 map 4415041...    38   1.5    9
(BY229729) Mus musculus adult inner ear cDNA, RIKEN full-len...    32   1.5    3
(AY689436) Deerpox virus W-848-83, complete genome.                34   1.5    7
(CT573424) Zebrafish DNA sequence *** SEQUENCING CANCELLED *...    34   1.5    8
(BX908747) Zebrafish DNA sequence from clone DKEY-58J15 in l...    34   1.5    8
(AL132862) Caenorhabditis elegans YAC Y73F8A.                      36   1.5    11
(FM992688) Candida dubliniensis CD36 chromosome 1, complete ...    42   1.6    9
(EH013454) USDA-FP_186253 Lysiphlebus testaceipes adult whol...    38   1.6    3
(AC189670) Trichinella spiralis BAC clone TS195-11H12 from c...    36   1.7    7
(CR790370) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    34   1.7    2
(ER883600) MUGQ_CH252P277H14Sp6_CN586_057 CHORI-252 Vervet M...    34   1.7    3
(CR545465) Zebrafish DNA sequence from clone CH211-263P13 in...    36   1.7    7
(AE014830) Plasmodium falciparum 3D7 chromosome 10 section 2...    36   1.7    10
(CR790377) Zebrafish DNA sequence from clone CH211-260M3 in ...    34   1.7    2
(CR847958) Zebrafish DNA sequence from clone CH211-203L23 in...    36   1.7    2
(AC027563) Homo sapiens chromosome 15 clone RP11-98L9 map 15...    42   1.7    5
(AC132123) Mus musculus BAC clone RP24-79F8 from 1, complete...    36   1.8    10
(AC149129) Medicago truncatula chromosome 7 clone mth2-139m1...    36   1.8    7
(CL944996) OsIFSB001417 Oryza sativa Express Library Oryza s...    46   1.8    2
(AE017332) Mycoplasma hyopneumoniae 232, complete genome.          32   1.9    21
(AC117082) Dictyostelium discoideum chromosome 2 map complem...    34   1.9    2
(AM458422) Vitis vinifera contig VV79X003991.5, whole genome...    32   1.9    2
(CP000939) Clostridium botulinum B1 str. Okra, complete genome.    34   1.9    20
(AC174515) Strongylocentrotus purpuratus clone R3-1113I11, W...    34   1.9    5
(AC206674) Zea mays chromosome 5 clone CH201-84K20; ZMMBBc00...    42   1.9    3
(CU928681) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    44   1.9    4
(AC200952) Strongylocentrotus purpuratus clone R3-1104K18, W...    42   1.9    3
(AC095041) Homo sapiens BAC clone RP11-84H6 from 4, complete...    34   2.0    7
(CP000236) Ehrlichia chaffeensis str. Arkansas, complete gen...    34   2.0    16
(FB571382) Sequence 249 from Patent EP1865317.                     34   2.0    10
(FB571326) Sequence 193 from Patent EP1865317.                     34   2.0    10
(AC177768) Strongylocentrotus purpuratus clone R3-1005G15, W...    42   2.0    6
(AM465598) Vitis vinifera contig VV78X176729.3, whole genome...    32   2.1    2
(FJ588849) Plasmodium falciparum isolate 3D7 UvrD-like prote...    34   2.1    2
(AP008145) Lotus japonicus genomic DNA, chromosome 4, clone:...    34   2.1    8
(AC179518) Strongylocentrotus purpuratus clone R3-1035D5, WO...    36   2.1    5
(Z82268) Caenorhabditis elegans Cosmid F52B11.                     36   2.2    7
(AC178594) Strongylocentrotus purpuratus clone R3-3021N20, W...    38   2.2    7
(AM449899) Vitis vinifera, whole genome shotgun sequence, co...    34   2.2    3
(CZ282027) cp20c03.f Candida parapsilosis Random Genomic Lib...    34   2.2    2
(BX005078) Zebrafish DNA sequence from clone CH211-182N24 in...    34   2.2    8
(CU928225) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    32   2.3    8
(AC005505) Plasmodium falciparum chromosome 12 clone PFYAC18...    34   2.3    11
(EC819314) SME00003029 esmbsro2 Sawyeria marylandensis cDNA,...    36   2.3    2
(AC115680) Dictyostelium discoideum chromosome 2 map 4915084...    32   2.3    8
(AC006280) Plasmodium falciparum chromosome 12 clone PFYAC72...    40   2.3    10
(BX548071) Zebrafish DNA sequence from clone DKEY-25L23 in l...    34   2.4    6
(CT009487) Zebrafish DNA sequence from clone CH211-198I6 in ...    38   2.4    9
(AL607093) Oryza sativa genomic DNA, chromosome 7, BAC clone...    38   2.4    3
(AL669939) Mouse DNA sequence from clone RP23-213O8 on chrom...    38   2.5    4
(DL173267) Methods for Identifying the Target of a Compound ...    38   2.5    3
(AX488827) Sequence 6127 from Patent WO02053728.                   38   2.5    3
(G81737) S208P6071RC4.T0 129S1/SvImJ Mus musculus STS genomi...    42   2.6    2
(AC201333) Strongylocentrotus purpuratus clone R3-16N20, WOR...    36   2.6    7
(AC004709) Plasmodium falciparum chromosome 12, *** SEQUENCI...    32   2.6    11
(BX546500) Zebrafish DNA sequence from clone DKEY-15L19 in l...    36   2.6    7
(AC180591) Strongylocentrotus purpuratus clone R3-3016M07, W...    34   2.6    9
(BZ945667) CH240_122B6.TJ CHORI-240 Bos taurus genomic clone...    36   2.6    2
(AM431576) Vitis vinifera contig VV78X148767.4, whole genome...    36   2.7    4
(AC181638) Strongylocentrotus purpuratus clone R3-1103M24, W...    32   2.7    8
(CV744865) SJAL_054_91.T3 SJL Schistosoma japonicum cDNA, mR...    42   2.7    2
(AC018743) Homo sapiens chromosome 12 clone RP11-289M22, WOR...    36   2.7    11
(AC184215) Strongylocentrotus purpuratus clone R3-3049H9, WO...    46   2.8    5
(CT208545) Sus scrofa genomic clone CH242-78P11, genomic sur...    38   2.8    2
(AC180428) Strongylocentrotus purpuratus clone R3-3103I2, WO...    38   2.8    4
(AC173724) Strongylocentrotus purpuratus clone R3-59C1, *** ...    46   2.8    3
(CR626878) Zebrafish DNA sequence from clone DKEY-196H17 in ...    36   2.9    9
(AC188634) Canis lupus familiaris chromosome 2 clone XX-454G...    36   2.9    5
(CR855383) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    38   2.9    6
(CR450712) Zebrafish DNA sequence *** SEQUENCING CANCELLED *...    34   3.0    7
(BX640473) Zebrafish DNA sequence from clone CH211-201F12 in...    34   3.0    7
(EE666494) SAAH-aab61b08.g1 Agen 0058 Schmidtea mediterranea...    36   3.1    2
(CP000942) Ureaplasma parvum serovar 3 str. ATCC 27815, comp...    34   3.1    21
(AF222894) Ureaplasma parvum serovar 3 str. ATCC 700970, com...    34   3.1    21
(AC135318) Medicago truncatula clone mth2-36o3, WORKING DRAF...    36   3.1    7
(AP005650) Oryza sativa Japonica Group genomic DNA, chromoso...    46   3.1    3
(AC168481) Strongylocentrotus purpuratus clone R3-3117L22, W...    36   3.2    8
(AY181099) Bombus consobrinus strain Norway cytochrome oxida...    38   3.2    3
(AL160151) Human DNA sequence from clone RP11-168G22 on chro...    36   3.2    7
(GC699168) Sequence 14413 from patent US 6812339.                  34   3.2    6
(GC697366) Sequence 12611 from patent US 6812339.                  34   3.2    6
(CR318585) Zebrafish DNA sequence from clone CH211-153H7 in ...    46   3.3    1
(BX890557) Zebrafish DNA sequence from clone DKEYP-8B8.            46   3.3    1
(AC200528) Gallus gallus BAC clone CH261-23N22 from chromoso...    46   3.3    1
(AC187593) Gallus gallus BAC clone CH261-110P23 from chromos...    46   3.3    1
(AC145509) Gasterosteus aculeatus clone CH213-128O17, comple...    46   3.3    1
(BV433325) S237P6285RG1.T0 PortugueseWaterDog Canis familiar...    46   3.3    1
(AL929443) Mouse DNA sequence from clone RP23-467A7 on chrom...    46   3.3    1
(AC147567) Mus musculus BAC clone RP23-107E14 from 6, comple...    46   3.3    1
(AC147377) Mus musculus BAC clone RP23-156K23 from chromosom...    46   3.3    1
(AC122466) Mus musculus BAC clone RP24-304N8 from chromosome...    46   3.3    1
(AC120004) Mus musculus chromosome 5, clone RP24-150N15, com...    46   3.3    1
(AC117234) Mus musculus BAC clone RP23-410J2 from chromosome...    46   3.3    1
(U46574) Arabidopsis thaliana protein farnesyl transferase b...    46   3.3    1
(U44849) Arabidopsis thaliana beta subunit of protein farnes...    46   3.3    1
(FJ356723) Trichophyton equinum subtilisin-like protease 2 g...    46   3.3    1
(EU709011) Banksia nivea clone DnD007 microsatellite sequence.     46   3.3    1
(DQ908290) Gossypium hirsutum clone LIB5327-015-A1-N1-E7_Gh3...    46   3.3    1
(CU633901) Podospora anserina genomic DNA chromosome 1, supe...    46   3.3    1
(CU633899) Podospora anserina genomic DNA chromosome 1, supe...    46   3.3    1
(CU633895) Podospora anserina genomic DNA chromosome 4, supe...    46   3.3    1
(BT030457) Arabidopsis thaliana At5g40280 mRNA, complete cds.      46   3.3    1
(AY680406) Arabidopsis thaliana ARF13 (At1g34170) mRNA, comp...    46   3.3    1
(AY669793) Arabidopsis thaliana clone C105348 (B) ARF13 (At1...    46   3.3    1
(AY099623) Arabidopsis thaliana beta subunit of protein farn...    46   3.3    1
(AY081847) Aspergillus niger monosaccharide transporter (mst...    46   3.3    1
(AP009779) Lotus japonicus genomic DNA, clone: LjT34L14, TM1...    46   3.3    1
(AP008208) Oryza sativa (japonica cultivar-group) genomic DN...    46   3.3    1
(AM270004) Aspergillus niger contig An02c0090, complete genome.    46   3.3    1
(AF214106) Arabidopsis thaliana farnesyltransferase beta sub...    46   3.3    1
(AC189402) Brassica rapa subsp. pekinensis clone KBrB057L05,...    46   3.3    1
(AC183303) Medicago truncatula clone mth2-159e4, complete se...    46   3.3    1
(AC162160) Medicago truncatula clone mth2-61k9, complete seq...    46   3.3    1
(AC153725) Medicago truncatula clone mth2-78c5, complete seq...    46   3.3    1
(AC015446) Arabidopsis thaliana chromosome I BAC F12G12 geno...    46   3.3    1
(AB023032) Arabidopsis thaliana genomic DNA, chromosome 5, T...    46   3.3    1
(AB010699) Arabidopsis thaliana genomic DNA, chromosome 5, P...    46   3.3    1
(FB506832) Sequence 46 from Patent WO2008098933.                   46   3.3    1
(EA483200) Sequence 629 from patent US 7345217.                    46   3.3    1
(EA284576) Sequence 178 from patent US 7262338.                    46   3.3    1
(EA284572) Sequence 173 from patent US 7262338.                    46   3.3    1
(EA284571) Sequence 172 from patent US 7262338.                    46   3.3    1
(EA284501) Sequence 80 from patent US 7262338.                     46   3.3    1
(EA284500) Sequence 79 from patent US 7262338.                     46   3.3    1
(EA284486) Sequence 58 from patent US 7262338.                     46   3.3    1
(EA284483) Sequence 55 from patent US 7262338.                     46   3.3    1
(EA284482) Sequence 54 from patent US 7262338.                     46   3.3    1
(EA284439) Sequence 1 from patent US 7262338.                      46   3.3    1
(EA157514) Sequence 21829 from patent US 7214786.                  46   3.3    1
(EA065071) Sequence 74 from patent US 7172881.                     46   3.3    1
(EA065070) Sequence 73 from patent US 7172881.                     46   3.3    1
(EA065056) Sequence 52 from patent US 7172881.                     46   3.3    1
(EA065053) Sequence 49 from patent US 7172881.                     46   3.3    1
(EA065052) Sequence 48 from patent US 7172881.                     46   3.3    1
(DJ023299) Detection method of Triticeae alien chromosome in...    46   3.3    1
(CS144297) Sequence 1 from Patent EP1564296.                       46   3.3    1
(CQ792428) Sequence 173 from Patent WO2004020642.                  46   3.3    1
(CQ792427) Sequence 172 from Patent WO2004020642.                  46   3.3    1
(CQ792335) Sequence 80 from Patent WO2004020642.                   46   3.3    1
(CQ792334) Sequence 79 from Patent WO2004020642.                   46   3.3    1
(CQ792313) Sequence 58 from Patent WO2004020642.                   46   3.3    1
(CQ792310) Sequence 55 from Patent WO2004020642.                   46   3.3    1
(CQ792309) Sequence 54 from Patent WO2004020642.                   46   3.3    1
(CQ792256) Sequence 1 from Patent WO2004020642.                    46   3.3    1
(BD080940) Stress-resistance and retarded aging in plant.          46   3.3    1
(AX765988) Sequence 74 from Patent WO02097097.                     46   3.3    1
(AX765987) Sequence 73 from Patent WO02097097.                     46   3.3    1
(AX765966) Sequence 52 from Patent WO02097097.                     46   3.3    1
(AX765963) Sequence 49 from Patent WO02097097.                     46   3.3    1
(AX765962) Sequence 48 from Patent WO02097097.                     46   3.3    1
(AX506241) Sequence 936 from Patent WO0216655.                     46   3.3    1
(GM041516) Sequence 47 from Patent WO2008061153.                   46   3.3    1
(GM041514) Sequence 45 from Patent WO2008061153.                   46   3.3    1
(AR555323) Sequence 10454 from patent US 6747137.                  46   3.3    1
(AR551281) Sequence 6412 from patent US 6747137.                   46   3.3    1
(EU493990) Drosophila acanthoptera voucher 105622 NADH dehyd...    46   3.3    1
(DQ309429) Dictyostelium discoideum COP9 signalosome complex...    46   3.3    1
(BX538350) Cryptosporidium parvum chromosome 6, complete seq...    46   3.3    1
(AY428796) Dictyostelium discoideum DIF insensitive mutant A...    46   3.3    1
(AF549493) Coccotrypes dactyliperda clone MTC-3-F10 microsat...    46   3.3    1
(AC108879) Homo sapiens chromosome X clone RP11-265P11 map p...    46   3.3    1
(AC091808) Homo sapiens chromosome X clone RP11-157D23 map p...    46   3.3    1
(AC151876) Didelphis virginiana clone 0M-33H23, WORKING DRAF...    46   3.3    1
(AC142071) Rattus norvegicus clone CH230-82F20, *** SEQUENCI...    46   3.3    1
(AC133727) Rattus norvegicus clone CH230-162L16, *** SEQUENC...    46   3.3    1
(AC132652) Rattus norvegicus clone CH230-294J16, WORKING DRA...    46   3.3    1
(AC128812) Rattus norvegicus clone CH230-74E1, *** SEQUENCIN...    46   3.3    1
(AC126207) Rattus norvegicus clone CH230-284B4, WORKING DRAF...    46   3.3    1
(AC125920) Rattus norvegicus clone CH230-74G4, *** SEQUENCIN...    46   3.3    1
(AC122657) Rattus norvegicus clone CH230-23G10, *** SEQUENCI...    46   3.3    1
(AC122626) Rattus norvegicus clone CH230-87K2, *** SEQUENCIN...    46   3.3    1
(AC120815) Rattus norvegicus clone CH230-485D20, WORKING DRA...    46   3.3    1
(AC118397) Rattus norvegicus clone CH230-116A13, *** SEQUENC...    46   3.3    1
(AC116080) Rattus norvegicus clone CH230-40C18, *** SEQUENCI...    46   3.3    1
(AC111811) Rattus norvegicus clone CH230-39B16, *** SEQUENCI...    46   3.3    1
(AC111622) Rattus norvegicus clone CH230-125G14, *** SEQUENC...    46   3.3    1
(AC111557) Rattus norvegicus clone CH230-22P16, *** SEQUENCI...    46   3.3    1
(AC107013) Rattus norvegicus clone CH230-151C15, *** SEQUENC...    46   3.3    1
(AC106313) Rattus norvegicus clone CH230-125F3, WORKING DRAF...    46   3.3    1
(AC106290) Rattus norvegicus clone CH230-70K10, WORKING DRAF...    46   3.3    1
(AC095440) Rattus norvegicus clone CH230-5O21, WORKING DRAFT...    46   3.3    1
(AC094998) Rattus norvegicus clone CH230-6D13, WORKING DRAFT...    46   3.3    1
(AC094996) Rattus norvegicus clone CH230-6F15, *** SEQUENCIN...    46   3.3    1
(FP102945) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    46   3.3    1
(FP091235) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    46   3.3    1
(CU915641) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    46   3.3    1
(CU914239) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    46   3.3    1
(AC094511) Rattus norvegicus clone CH230-4K12, WORKING DRAFT...    46   3.3    1
(AC094421) Rattus norvegicus clone CH230-3K13, *** SEQUENCIN...    46   3.3    1
(AC222100) Bos taurus clone CH240-372A20, WORKING DRAFT SEQU...    46   3.3    1
(AC201448) Strongylocentrotus purpuratus clone R3-3026I14, W...    46   3.3    1
(AC184883) Strongylocentrotus purpuratus clone R3-3022H2, WO...    46   3.3    1
(AC184464) Strongylocentrotus purpuratus clone R3-4003I7, WO...    46   3.3    1
(AC181911) Strongylocentrotus purpuratus clone R3-1011P20, W...    46   3.3    1
(AC181775) Strongylocentrotus purpuratus clone R3-1034B05, W...    46   3.3    1
(AC180639) Strongylocentrotus purpuratus clone R3-3019I16, W...    46   3.3    1
(AC179775) Strongylocentrotus purpuratus clone R3-1016C04, W...    46   3.3    1
(AC177183) Strongylocentrotus purpuratus clone R3-4018G10, W...    46   3.3    1
(AC176886) Strongylocentrotus purpuratus clone R3-31I6, WORK...    46   3.3    1
(AC168926) Bos taurus clone CH240-233N6, WORKING DRAFT SEQUE...    46   3.3    1
(AC168625) Strongylocentrotus purpuratus clone R3-3046C3, WO...    46   3.3    1
(AC168135) Bos taurus clone CH240-218I1, WORKING DRAFT SEQUE...    46   3.3    1
(BX832672) Arabidopsis thaliana Full-length cDNA Complete se...    46   3.3    1
(FI266410) CccaBb060-F13JR CccABb Cajanus cajan genomic clon...    46   3.3    1
(FI254639) CccaBb052-G11JR CccABb Cajanus cajan genomic clon...    46   3.3    1
(ET784039) CHO_OF629xn15f1.ab1 CHO_OF Nicotiana tabacum geno...    46   3.3    1
(ET109607) QM0AAC17CE04RM1 CCH3 Citrus clementina genomic cl...    46   3.3    1
(ER594310) 1093016214714 Global-Ocean-Sampling_GS-36-01-01-2...    46   3.3    1
(ER577227) 1093015816211 Global-Ocean-Sampling_GS-36-01-01-2...    46   3.3    1
(ER442940) 1092963819632 Global-Ocean-Sampling_GS-35-01-01-1...    46   3.3    1
(ER438611) 1092963805278 Global-Ocean-Sampling_GS-35-01-01-1...    46   3.3    1
(ER366166) 1093022029642 Global-Ocean-Sampling_GS-34-01-01-1...    46   3.3    1
(EK792027) 1093017167510 Global-Ocean-Sampling_GS-33-01-01-1...    46   3.3    1
(EK446802) 1095467047148 Global-Ocean-Sampling_GS-32-01-01-1...    46   3.3    1
(EK426286) 1095516023622 Global-Ocean-Sampling_GS-31-01-01-1...    46   3.3    1
(EK398271) 1095469528743 Global-Ocean-Sampling_GS-31-01-01-1...    46   3.3    1
(EK136786) 1095439021695 Global-Ocean-Sampling_GS-31-01-01-1...    46   3.3    1
(EK088934) 1092961191877 Global-Ocean-Sampling_GS-31-01-01-1...    46   3.3    1
(EK059253) 1092960060847 Global-Ocean-Sampling_GS-31-01-01-1...    46   3.3    1
(EK049754) 1092959684228 Global-Ocean-Sampling_GS-31-01-01-1...    46   3.3    1
(EK011035) 1092955180639 Global-Ocean-Sampling_GS-31-01-01-1...    46   3.3    1
(EJ920431) 1093018625373 Global-Ocean-Sampling_GS-30-02-01-1...    46   3.3    1
(EJ919515) 1093018594106 Global-Ocean-Sampling_GS-30-02-01-1...    46   3.3    1
(AL733720) Danio rerio genomic clone DKEY-3N21, genomic surv...    46   3.3    1
(EJ559427) 1092959536387 Global-Ocean-Sampling_GS-29-01-01-1...    46   3.3    1
(EJ557295) 1092959511970 Global-Ocean-Sampling_GS-29-01-01-1...    46   3.3    1
(EJ536266) 1092955260878 Global-Ocean-Sampling_GS-29-01-01-1...    46   3.3    1
(EJ414804) 1093012173526 Global-Ocean-Sampling_GS-28-01-01-1...    46   3.3    1
(EJ031206) 1095454047666 Global-Ocean-Sampling_GS-26-01-01-1...    46   3.3    1
(EJ008785) 1095403539458 Global-Ocean-Sampling_GS-26-01-01-1...    46   3.3    1
(DX925590) Bst5kb001332 bstricta5kb Boechera stricta genomic...    46   3.3    1
(DX787024) 2688668 VV07 Ustilago maydis genomic clone 120219...    46   3.3    1
(DX750549) 2519960 VV03 Ustilago maydis genomic clone 108547...    46   3.3    1
(DX677265) 2211050 VV03 Ustilago maydis genomic clone 907468...    46   3.3    1
(DX670281) 2039329 VV02 Ustilago maydis genomic clone 827231...    46   3.3    1
(DX668225) 2007894 VV02 Ustilago maydis genomic clone 817801...    46   3.3    1
(DX636333) 2265293 VV02 Ustilago maydis genomic clone 813735...    46   3.3    1
(DX613244) 2267006 VV02 Ustilago maydis genomic clone 833681...    46   3.3    1
(AL422462) T7 end of clone AZ0AA001E01 of library AZ0AA from...    46   3.3    1
(DH489694) Monosiga ovata DNA, fosmid clone: MOF-049C15, gen...    46   3.3    1
(DH478949) Monosiga ovata DNA, fosmid clone: MOF-030L05, gen...    46   3.3    1
(DH473408) Monosiga ovata DNA, fosmid clone: MOF-020P09, gen...    46   3.3    1
(DH470637) Monosiga ovata DNA, fosmid clone: MOF-016B24, gen...    46   3.3    1
(DH469400) Monosiga ovata DNA, fosmid clone: MOF-014B06, gen...    46   3.3    1
(DH462789) Monosiga ovata DNA, fosmid clone: MOF-002G02, gen...    46   3.3    1
(DE222914) Trifolium pratense DNA, clone:RCG14477.                 46   3.3    1
(CZ538880) SRAA-aad22d10.g1 Strongyloides ratti whole genome...    46   3.3    1
(CZ530535) SRAA-aac67e10.g1 Strongyloides ratti whole genome...    46   3.3    1
(CZ530531) SRAA-aac67e08.g1 Strongyloides ratti whole genome...    46   3.3    1
(CR967413) mth4-36H9FM1 BAC end, cultivar Jemalong A17 of Me...    46   3.3    1
(CC056730) SALK_110517.48.70.x Arabidopsis thaliana TDNA ins...    46   3.3    1
(BX982427) Reverse strand read from insert in 3'HPRT inserti...    46   3.3    1
(EL648566) AGENCOURT_97908128 NIH_ZGC_6 Danio rerio cDNA clo...    46   3.3    1
(EH764067) CNSM10074.b1_C23.ab1 CNS(LMS) yellow starthistle ...    46   3.3    1
(EH754589) CNSL13757.b1_J08.ab1 CNS(LMS) yellow starthistle ...    46   3.3    1
(EH749473) CNMS8822.b1_L22.ab1 CNM(LMS) spotted knapweed Cen...    46   3.3    1
(EH244620) JGI_ACAC12073.fwd ACAC Phakopsora pachyrhizi TW72...    46   3.3    1
(EH243549) JGI_ACAC12128.fwd ACAC Phakopsora pachyrhizi TW72...    46   3.3    1
(EH015332) USDA-FP_187943 Lysiphlebus testaceipes adult whol...    46   3.3    1
(EH013920) USDA-FP_186673 Lysiphlebus testaceipes adult whol...    46   3.3    1
(EH012217) USDA-FP_185139 Lysiphlebus testaceipes adult whol...    46   3.3    1
(EH011351) USDA-FP_184359 Lysiphlebus testaceipes adult whol...    46   3.3    1
(EH010140) USDA-FP_183268 Lysiphlebus testaceipes adult whol...    46   3.3    1
(EB624398) AGENCOURT_54980160 D. mojavensis EST Drosophila m...    46   3.3    1

>(BJ373270) Dictyostelium discoideum cDNA clone:ddc2o10, 3' end,
            single read.
          Length = 709

 Score =  650 bits (328), Expect(2) = 0.0
 Identities = 346/346 (100%)
 Strand = Plus / Minus


Query: 905  atcaagtttcaagttcaattaataataaagttaataatagtactaatgaaatttatttta 964
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356  atcaagtttcaagttcaattaataataaagttaataatagtactaatgaaatttatttta 297


Query: 965  tattaccaatgaattggtttgttgaatggaaacgattcattgatggtagtaatttaccac 1024
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296  tattaccaatgaattggtttgttgaatggaaacgattcattgatggtagtaatttaccac 237


Query: 1025 caacttcaaatatagttacaactagtttctttaaaacaattgatggtcttccaattcacc 1084
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 236  caacttcaaatatagttacaactagtttctttaaaacaattgatggtcttccaattcacc 177


Query: 1085 aattaaaagataatttacaattagattctgattacatttgtatctcaaaagaaacatttc 1144
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 176  aattaaaagataatttacaattagattctgattacatttgtatctcaaaagaaacatttc 117


Query: 1145 tagctttcaataaattcttatanancggttggtccaataattatgagacaaactaaaaan 1204
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116  tagctttcaataaattcttatanancggttggtccaataattatgagacaaactaaaaan 57


Query: 1205 atttacnaaanccaccatatcnattttatcttcaaaaattggaaat 1250
            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56   atttacnaaanccaccatatcnattttatcttcaaaaattggaaat 11

 Score =  511 bits (258), Expect(2) = 0.0
 Identities = 258/258 (100%)
 Strand = Plus / Minus


Query: 558 gaaatattataataatattcataatttacaaagtggtgttaattttcaacatggtgagaa 617
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 703 gaaatattataataatattcataatttacaaagtggtgttaattttcaacatggtgagaa 644


Query: 618 tgatgaatttgaaacatcaataaataatgaaactggagaaaagaaatttaaatttgaaaa 677
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 643 tgatgaatttgaaacatcaataaataatgaaactggagaaaagaaatttaaatttgaaaa 584


Query: 678 agatcatgatggattttacttaattgatagagatcctgtttatttcaatgtaattttaaa 737
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 agatcatgatggattttacttaattgatagagatcctgtttatttcaatgtaattttaaa 524


Query: 738 ctttttaagaactggtgttatcacaataccaccctcgttagatattaaatgtttaattgc 797
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 ctttttaagaactggtgttatcacaataccaccctcgttagatattaaatgtttaattgc 464


Query: 798 tgattcaaaattttatag 815
           ||||||||||||||||||
Sbjct: 463 tgattcaaaattttatag 446

Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 102105510
Number of Hits to DB: 1,733,866,931
Number of extensions: 122775256
Number of successful extensions: 12388819
Number of sequences better than 10.0: 818
Length of query: 1259
Length of database: 101,790,757,118
Length adjustment: 24
Effective length of query: 1235
Effective length of database: 99,340,224,878
Effective search space: 122685177724330
Effective search space used: 122685177724330
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
protein update 2009. 7.22
Homology vs Protein 
Query= Contig-U03082-1 (Contig-U03082-1Q) /CSM_Contig/Contig-U03082-1Q.Seq.d
         (1259 letters)

Database: nrp_B
           3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

T15820(T15820) hypothetical protein C52B11.2 - Caenorhabditis el...    51   1e-04
AK011637_1(AK011637|pid:none) Mus musculus 10 days embryo whole ...    50   1e-04
(Q8VC57) RecName: Full=BTB/POZ domain-containing protein KCTD5; ...    50   2e-04
(Q8CEZ0) RecName: Full=BTB/POZ domain-containing protein KCTD2; ...    50   2e-04
AK129077_1(AK129077|pid:none) Mus musculus mRNA for mKIAA4250 pr...    50   2e-04
AK143644_1(AK143644|pid:none) Mus musculus 6 days neonate spleen...    50   2e-04
BC076863_1(BC076863|pid:none) Xenopus laevis potassium channel t...    50   2e-04
D79998_1(D79998|pid:none) Homo sapiens KIAA0176 mRNA, complete c...    50   2e-04
BC158374_1(BC158374|pid:none) Xenopus tropicalis potassium chann...    50   2e-04
BC122218_1(BC122218|pid:none) Danio rerio zgc:153278, mRNA (cDNA...    50   2e-04
BC077515_1(BC077515|pid:none) Xenopus laevis potassium channel t...    50   2e-04
AL627096_8(AL627096|pid:none) Mouse DNA sequence from clone RP23...    50   2e-04
AL627096_7(AL627096|pid:none) Mouse DNA sequence from clone RP23...    50   2e-04
AL627096_6(AL627096|pid:none) Mouse DNA sequence from clone RP23...    50   2e-04
BC160142_1(BC160142|pid:none) Synthetic construct Homo sapiens c...    50   2e-04
AL022314_2(AL022314|pid:none) Human DNA sequence from clone RP5-...    49   3e-04
AJ720572_1(AJ720572|pid:none) Gallus gallus mRNA for hypothetica...    49   3e-04
(Q8N5Z5) RecName: Full=BTB/POZ domain-containing protein KCTD17;...    49   3e-04
BC134646_1(BC134646|pid:none) Bos taurus potassium channel tetra...    49   3e-04
BC145799_1(BC145799|pid:none) Mus musculus potassium channel tet...    49   3e-04
BC031038_1(BC031038|pid:none) Homo sapiens potassium channel tet...    49   3e-04
AL022314_3(AL022314|pid:none) Human DNA sequence from clone RP5-...    49   3e-04
BC126039_1(BC126039|pid:none) Xenopus laevis potassium channel t...    48   6e-04
T31922(T31922)hypothetical protein C17F4.4 - Caenorhabditis eleg...    48   6e-04
BT074147_1(BT074147|pid:none) Oncorhynchus mykiss clone omyk-evo...    48   6e-04
T32065(T32065)hypothetical protein F22E5.8 - Caenorhabditis eleg...    48   6e-04
AF016681_7(AF016681|pid:none) Caenorhabditis elegans cosmid F22E...    47   0.001
T25974(T25974) hypothetical protein ZC239.3 - Caenorhabditis ele...    46   0.002
AK298518_1(AK298518|pid:none) Homo sapiens cDNA FLJ60779 complet...    45   0.004
(Q80UN1) RecName: Full=BTB/POZ domain-containing protein KCTD9; ...    45   0.004
(Q7L273) RecName: Full=BTB/POZ domain-containing protein KCTD9; ...    45   0.004
AJ720563_1(AJ720563|pid:none) Gallus gallus mRNA for hypothetica...    45   0.004
AB172166_1(AB172166|pid:none) Macaca fascicularis brain cDNA clo...    45   0.004
BC068518_1(BC068518|pid:none) Homo sapiens potassium channel tet...    45   0.004
AY232114_1(AY232114|pid:none) Drosophila yakuba clone yak-ad_CG1...    45   0.007
T33590(T33590)hypothetical protein C40A11.6 - Caenorhabditis ele...    44   0.009
T25976(T25976)hypothetical protein ZC239.14 - Caenorhabditis ele...    44   0.009
U80842_14(U80842|pid:none) Caenorhabditis elegans cosmid ZC239, ...    44   0.009
BC076416_1(BC076416|pid:none) Danio rerio potassium channel tetr...    44   0.009
U80842_16(U80842|pid:none) Caenorhabditis elegans cosmid ZC239, ...    44   0.012
T25978(T25978)hypothetical protein ZC239.15 - Caenorhabditis ele...    44   0.012
AC091527_1(AC091527|pid:none) Trypanosoma brucei chromosome 7 cl...    44   0.012
CR381630_3(CR381630|pid:none) Zebrafish DNA sequence from clone ...    44   0.012
AE014298_241(AE014298|pid:none) Drosophila melanogaster chromoso...    43   0.027
AY069257_1(AY069257|pid:none) Drosophila melanogaster GM03763 fu...    43   0.027
AY069350_1(AY069350|pid:none) Drosophila melanogaster LD05823 fu...    43   0.027
AL031024_3(AL031024|pid:none) Drosophila melanogaster cosmid clo...    43   0.027
AE014297_80(AE014297|pid:none) Drosophila melanogaster chromosom...    43   0.027
(Q6DG99) RecName: Full=BTB/POZ domain-containing protein KCTD6; ...    42   0.036
AB056802_1(AB056802|pid:none) Macaca fascicularis brain cDNA clo...    42   0.036
T25973(T25973)hypothetical protein ZC239.4 - Caenorhabditis eleg...    42   0.036
AY890894_1(AY890894|pid:none) Synthetic construct Homo sapiens c...    42   0.047
(Q5RBH4) RecName: Full=BTB/POZ domain-containing protein TNFAIP1...    42   0.047
A41784(A41784)tumor necrosis factor-alpha-induced protein B12 - ...    42   0.047
(Q13829) RecName: Full=BTB/POZ domain-containing protein TNFAIP1...    42   0.047
AL442115_20(AL442115|pid:none) Oryza sativa genomic DNA, chromos...    42   0.047
AB174517_1(AB174517|pid:none) Macaca fascicularis brain cDNA clo...    42   0.047
BC168135_1(BC168135|pid:none) Xenopus tropicalis cDNA clone MGC:...    42   0.047
T20366(T20366) hypothetical protein D2045.8 - Caenorhabditis ele...    42   0.047
DQ213077_1(DQ213077|pid:none) Taeniopygia guttata clone 0058P000...    42   0.061
AK222548_1(AK222548|pid:none) Homo sapiens mRNA for potassium ch...    42   0.061
CS300501_1(CS300501|pid:none) Sequence 9 from Patent EP1661986.        42   0.061
AY597809_1(AY597809|pid:none) Homo sapiens chromosome 12 potassi...    42   0.061
(Q7TPL3) RecName: Full=BTB/POZ domain-containing protein KCTD10;...    42   0.061
BC148100_1(BC148100|pid:none) Bos taurus potassium channel tetra...    42   0.061
(O70479) RecName: Full=BTB/POZ domain-containing protein TNFAIP1...    42   0.061
AF099914_4(AF099914|pid:none) Caenorhabditis elegans cosmid C40A...    42   0.061
(Q9H3F6) RecName: Full=BTB/POZ domain-containing protein KCTD10;...    42   0.061
BC166164_1(BC166164|pid:none) Xenopus tropicalis hypothetical pr...    42   0.061
AM441640_1(AM441640|pid:none) Vitis vinifera contig VV78X094561....    41   0.079
BC061457_1(BC061457|pid:none) Danio rerio potassium channel tetr...    41   0.079
(Q7TNY1) RecName: Full=BTB/POZ domain-containing protein TNFAIP1...    41   0.079
AK032314_1(AK032314|pid:none) Mus musculus adult male olfactory ...    41   0.079
(Q9D7X1) RecName: Full=BTB/POZ domain-containing protein KCTD4; ...    41   0.079
(Q8WVF5) RecName: Full=BTB/POZ domain-containing protein KCTD4; ...    41   0.079
AF016666_3(AF016666|pid:none) Caenorhabditis elegans cosmid B028...    41   0.10
AF016666_2(AF016666|pid:none) Caenorhabditis elegans cosmid B028...    41   0.10
BC158799_1(BC158799|pid:none) Rattus norvegicus potassium channe...    41   0.10
(Q8NC69) RecName: Full=BTB/POZ domain-containing protein KCTD6; ...    41   0.10
(Q8BNL5) RecName: Full=BTB/POZ domain-containing protein KCTD6; ...    41   0.10
BC042482_1(BC042482|pid:none) Homo sapiens potassium channel tet...    41   0.10
BX649457_4(BX649457|pid:none) Zebrafish DNA sequence from clone ...    41   0.10
AK017592_1(AK017592|pid:none) Mus musculus 8 days embryo whole b...    41   0.10
(Q96MP8) RecName: Full=BTB/POZ domain-containing protein KCTD7; ...    41   0.10
AK168386_1(AK168386|pid:none) Mus musculus 17 days pregnant adul...    41   0.10
(Q5EAX2) RecName: Full=BTB/POZ domain-containing protein TNFAIP1...    40   0.14
(Q922M3) RecName: Full=BTB/POZ domain-containing protein KCTD10;...    40   0.14
CR760702_1(CR760702|pid:none) Xenopus tropicalis finished cDNA, ...    40   0.14
BC134499_1(BC134499|pid:none) Bos taurus potassium channel tetra...    40   0.14
(Q8BJK1) RecName: Full=BTB/POZ domain-containing protein KCTD7; ...    40   0.14
BC077866_1(BC077866|pid:none) Xenopus laevis potassium channel t...    40   0.14
AK029942_1(AK029942|pid:none) Mus musculus adult male testis cDN...    40   0.14
AK140606_1(AK140606|pid:none) Mus musculus 10 days neonate cereb...    40   0.14
AF016670_3(AF016670|pid:none) Caenorhabditis elegans cosmid K02F...    40   0.18
AF016670_4(AF016670|pid:none) Caenorhabditis elegans cosmid K02F...    40   0.18
T32015(T32015;T32014)hypothetical protein K02F6.5 - Caenorhabdit...    40   0.18
BC122284_1(BC122284|pid:none) Danio rerio potassium channel tetr...    40   0.23
T25977(T25977)hypothetical protein ZC239.13 - Caenorhabditis ele...    40   0.23
BC154733_1(BC154733|pid:none) Danio rerio potassium channel tetr...    40   0.23
BC157374_1(BC157374|pid:none) Danio rerio potassium channel tetr...    40   0.23
BT046339_1(BT046339|pid:none) Salmo salar clone ssal-evf-544-203...    40   0.23
BC074061_1(BC074061|pid:none) Danio rerio zgc:92463, mRNA (cDNA ...    39   0.30
BT074760_1(BT074760|pid:none) Osmerus mordax clone omor-rgc-512-...    39   0.30
CR450789_1(CR450789|pid:none) Zebrafish DNA sequence from clone ...    39   0.30
FJ392642_1(FJ392642|pid:none) Danio rerio potassium channel tetr...    39   0.39
AF428394_1(AF428394|pid:none) Arabidopsis thaliana AT4g30940/F6I...    39   0.39
CU302301_2(CU302301|pid:none) Zebrafish DNA sequence from clone ...    39   0.39
AF016666_4(AF016666|pid:none) Caenorhabditis elegans cosmid B028...    39   0.39
AK074934_1(AK074934|pid:none) Homo sapiens cDNA FLJ90453 fis, cl...    39   0.39
(Q8K485) RecName: Full=BTB/POZ domain-containing protein KCTD11;...    39   0.51
(Q6P7W2) RecName: Full=SH3KBP1-binding protein 1; AltName: Full=...    38   0.67
BC022855_1(BC022855|pid:none) Homo sapiens SH3KBP1 binding prote...    38   0.67
T24532(T24532) hypothetical protein T05E12.3 - Caenorhabditis el...    38   0.67
(Q8TBC3) RecName: Full=SH3KBP1-binding protein 1;  &AF258553_1(A...    38   0.67
AK312748_1(AK312748|pid:none) Homo sapiens cDNA, FLJ93157, highl...    38   0.67
(P0C5J9) RecName: Full=SH3KBP1-binding protein 1; AltName: Full=...    38   0.67
AL954739_1(AL954739|pid:none) Zebrafish DNA sequence from clone ...    38   0.88
T25972(T25972) hypothetical protein ZC239.5 - Caenorhabditis ele...    38   0.88
AY899808_1(AY899808|pid:none) Mus musculus potassium channel tet...    37   1.1
Z83238_4(Z83238|pid:none) Caenorhabditis elegans Cosmid T08G3, c...    37   1.1
AF040653_5(AF040653|pid:none) Caenorhabditis elegans cosmid K05F...    37   1.1
(Q8R4G8) RecName: Full=BTB/POZ domain-containing protein KCTD1; ...    37   1.1
(Q863D4) RecName: Full=Putative potassium channel regulatory pro...    37   1.1
(Q5M956) RecName: Full=BTB/POZ domain-containing protein KCTD1; ...    37   1.1
AB300776_1(AB300776|pid:none) Nicotiana tabacum JEI1 mRNA for hy...    37   1.5
AC006642_6(AC006642|pid:none) Caenorhabditis elegans cosmid F49H...    37   1.5
AC084197_28(AC084197|pid:none) Caenorhabditis elegans cosmid Y73...    37   1.5
AK145279_1(AK145279|pid:none) Mus musculus mammary gland RCB-052...    37   2.0
BC090472_1(BC090472|pid:none) Danio rerio zgc:113115, mRNA (cDNA...    37   2.0
AM910994_107(AM910994|pid:none) Plasmodium knowlesi strain H chr...    37   2.0
CR940353_503(CR940353|pid:none) Theileria annulata strain Ankara...    37   2.0
AE014297_2998(AE014297|pid:none) Drosophila melanogaster chromos...    37   2.0
AF209722_1(AF209722|pid:none) Gallus gallus potassium channel Kv...    37   2.0
(Q6DCX3) RecName: Full=BTB/POZ domain-containing protein kctd15;...    36   2.6
AX685169_1(AX685169|pid:none) Sequence 1 from Patent WO0248369.        36   2.6
L48619_1(L48619|pid:none) Rattus norvegicus voltage-gated K+ cha...    36   2.6
AY222912_1(AY222912|pid:none) Schistosoma japonicum clone ZZD125...    36   2.6
(Q693B1) RecName: Full=BTB/POZ domain-containing protein KCTD11;...    36   2.6
(Q9BQ13) RecName: Full=BTB/POZ domain-containing protein KCTD14;...    36   2.6
AF107782_1(AF107782|pid:none) Mus musculus potassium channel Kv4...    36   3.3
AB003587_1(AB003587|pid:none) Rattus norvegicus mRNA for Kv4.3, ...    36   3.3
AF048713_1(AF048713|pid:none) Homo sapiens Kv4.3 potassium chann...    36   3.3
AF454388_1(AF454388|pid:none) Mustela putorius furo voltage-gate...    36   3.3
BC143390_1(BC143390|pid:none) Homo sapiens potassium voltage-gat...    36   3.3
(Q8BGV7) RecName: Full=BTB/POZ domain-containing protein KCTD13;...    36   3.3
(Q9UK17) RecName: Full=Potassium voltage-gated channel subfamily...    36   3.3
U42975_1(U42975|pid:none) Rattus norvegicus Shal-related potassi...    36   3.3
FN318888_1(FN318888|pid:none) Schistosoma japonicum isolate Anhu...    36   3.3
AB017059_1(AB017059|pid:none) Arabidopsis thaliana genomic DNA, ...    36   3.3
BC122576_1(BC122576|pid:none) Bos taurus potassium channel tetra...    36   3.3
AY027918_1(AY027918|pid:none) Homo sapiens TNFAIP1-like protein ...    36   3.3
AL845481_3(AL845481|pid:none) Zebrafish DNA sequence from clone ...    36   3.3
AF187963_1(AF187963|pid:none) Homo sapiens voltage gated potassi...    36   3.3
(Q58DF7) RecName: Full=BTB/POZ domain-containing protein KCTD11;       36   3.3
BC061458_1(BC061458|pid:none) Mus musculus potassium channel tet...    35   4.4
BT061214_1(BT061214|pid:none) Zea mays full-length cDNA clone ZM...    35   4.4
BC013868_1(BC013868|pid:none) Homo sapiens potassium channel tet...    35   4.4
(Q3URF8) RecName: Full=BTB/POZ domain-containing protein KCTD21;...    35   4.4
(Q9Y597) RecName: Full=BTB/POZ domain-containing protein KCTD3; ...    35   4.4
(Q6P3P4) RecName: Full=BTB/POZ domain-containing protein kctd15;...    35   4.4
AK075057_1(AK075057|pid:none) Homo sapiens cDNA FLJ90576 fis, cl...    35   4.4
(Q8BFX3) RecName: Full=BTB/POZ domain-containing protein KCTD3; ...    35   4.4
BC094879_1(BC094879|pid:none) Homo sapiens potassium channel tet...    35   4.4
BC168920_1(BC168920|pid:none) Rattus norvegicus potassium channe...    35   4.4
BC139363_1(BC139363|pid:none) Mus musculus potassium channel tet...    35   4.4
BT051636_1(BT051636|pid:none) Medicago truncatula clone MTYF5_F6...    35   5.7
AE014296_556(AE014296|pid:none) Drosophila melanogaster chromoso...    35   5.7
AM494955_54(AM494955|pid:none) Leishmania braziliensis chromosom...    35   5.7
BC136062_1(BC136062|pid:none) Xenopus tropicalis hypothetical pr...    35   5.7
CT005257_49(CT005257|pid:none) Leishmania major strain Friedlin,...    35   5.7
(P17970) RecName: Full=Potassium voltage-gated channel protein S...    35   5.7
AF084525_1(AF084525|pid:none) Drosophila melanogaster delayed re...    35   5.7
U80842_9(U80842|pid:none) Caenorhabditis elegans cosmid ZC239, c...    35   5.7
AF016681_9(AF016681|pid:none) Caenorhabditis elegans cosmid F22E...    35   5.7
FN376311_1(FN376311|pid:none) Schistosoma mansoni genome sequenc...    35   5.7
(Q0VD00) RecName: Full=BTB/POZ domain-containing protein KCTD15;...    35   5.7
BC001185_1(BC001185|pid:none) Homo sapiens potassium channel tet...    35   5.7
AE014296_553(AE014296|pid:none) Drosophila melanogaster chromoso...    35   5.7
U89265_1(U89265|pid:none) Xenopus laevis potassium channel xKv4....    35   5.7
AC122160_8(AC122160|pid:none) Medicago truncatula clone mth2-23d...    35   5.7
AY811378_1(AY811378|pid:none) Schistosoma japonicum SJCHGC05191 ...    35   5.7
FN317628_1(FN317628|pid:none) Schistosoma japonicum isolate Anhu...    35   5.7
AK294543_1(AK294543|pid:none) Homo sapiens cDNA FLJ61112 complet...    35   5.7
T32070(T32070)hypothetical protein F22E5.6 - Caenorhabditis eleg...    35   5.7
T25971(T25971)hypothetical protein ZC239.6 - Caenorhabditis eleg...    35   5.7
AF022982_3(AF022982|pid:none) Caenorhabditis elegans cosmid T23B...    35   7.4
AY514487_1(AY514487|pid:none) Ciona intestinalis potassium chann...    35   7.4
AY190924_1(AY190924|pid:none) Xenopus tropicalis CLLD4-like prot...    35   7.4
U80842_18(U80842|pid:none) Caenorhabditis elegans cosmid ZC239, ...    35   7.4
BX276177_2(BX276177|pid:none) Zebrafish DNA sequence from clone ...    35   7.4
BC109401_1(BC109401|pid:none) Danio rerio zgc:123261, mRNA (cDNA...    35   7.4
BC170254_1(BC170254|pid:none) Xenopus laevis potassium voltage-g...    35   7.4
T25980(T25980)hypothetical protein ZC239.17 - Caenorhabditis ele...    34   9.7
AF016681_6(AF016681|pid:none) Caenorhabditis elegans cosmid F22E...    34   9.7
(Q2T9W0) RecName: Full=BTB/POZ domain-containing protein KCTD13;...    34   9.7
S12746(S12746;S15058)potassium channel protein shab11 - fruit fl...    34   9.7
AE016820_418(AE016820|pid:none) Ashbya gossypii (= Eremothecium ...    34   9.7
L33868_1(L33868|pid:none) Panulirus interruptus K+ channel prote...    34   9.7
M32659_1(M32659|pid:none) D.melanogaster Shab11 protein mRNA, co...    34   9.7
BC079768_1(BC079768|pid:none) Xenopus laevis MGC86234 protein, m...    34   9.7

>T15820(T15820) hypothetical protein C52B11.2 - Caenorhabditis
           elegans  &U41276_4(U41276|pid:none)
          Length = 272

 Score = 50.8 bits (120), Expect = 1e-04
 Identities = 23/52 (44%), Positives = 35/52 (67%)
 Frame = +1

Query: 673 EKDHDGFYLIDRDPVYFNVILNFLRTGVITIPPSLDIKCLIADSKFYRLNEL 828
           ++D  G YLIDRDP +F+ ILN+LR G + + P L  + ++A++ FY L  L
Sbjct: 121 DRDETGAYLIDRDPDFFSPILNYLRHGKLIMNPGLSEEGILAEADFYNLPSL 172

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 1,302,858,410
Number of extensions: 19639745
Number of successful extensions: 47002
Number of sequences better than 10.0: 200
Number of HSP's gapped: 46990
Number of HSP's successfully gapped: 200
Length of query: 419
Length of database: 1,051,180,864
Length adjustment: 131
Effective length of query: 288
Effective length of database: 627,191,635
Effective search space: 180631190880
Effective search space used: 180631190880
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
PSORT 

 psg: 0.94  gvh: 0.49  alm: 0.36  top: 0.40  tms: 0.00  mit: 0.30  mip: 0.11
 nuc: 0.03  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 40.0 %: nuclear
	 28.0 %: cytoplasmic
	 12.0 %: mitochondrial
	  8.0 %: extracellular, including cell wall
	  4.0 %: cytoskeletal
	  4.0 %: vacuolar
	  4.0 %: vesicles of secretory system

>> prediction for Contig-U03082-1 is nuc
VS (DIR, S) 1
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 1
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0