Contig-U16529-1
Contig ID Contig-U16529-1
Contig update 2004. 6.11
Contig sequence
>Contig-U16529-1 (Contig-U16529-1Q) /CSM_Contig/Contig-U16529-1Q.Seq.d
ACTGTTGGCCTACTGGATTAAATAAATTTCAAAAGTAAAAGGTATAGTAT
TAAAAATTAAAAAATGTCTGTTGATGCAAATAAAGTAAAATTCTTCTTTG
GTAAAAACTGCACTGGTGAATCATTTGAATACAACAAAGGTGAAACTGTA
AGATTCAACAATGGTGATAAATGGAATGATAAATTCATGTCATGTTTGGT
TGGTTCAAATGTTAGATGTAACATTTGGGAGCATAATGAAATTGATACTC
CAACTCCAGGAAAATTCCAAGAATTGGCTCAAGGCAGTACAAACAATGAT
TTAACCTCAATAAATGGTCTTTCAAAGTTCCAAGTCTTACCAGGAGCTTT
TCAATGGGCAGTTGATGTTAAAATTGTCAACAAAGTTAATTCAACTGCTG
GTTCATATGAAATGACCATTACTCCATACCAAGTTGATAAGGTTGCTTGC
AAAGATGGTGATGACTTTGTTCAATTGCCAATTCCAAAACTTACTCCACC
AGATTCTGAAATTGTTAGCCATTTAACAGTTCGTCAAACACATACACCAT
ATGACTATGTTGTAAATGGAAGTGTTTACTTTAAATACTCCCCAACAACT
GGCCAAGTTACAGTTATTAAAAAAGATGAGACATTCCCAAAGAATATGAC
TGTTACACAAGATGATAATACATCTTTCATCTTTAACTTAAACTCTGAAA
AATAAAACAATATGTTTTTTTTTCTCTTTAAGAAAACTTTAAATAATAAA
ATTATGAATTTCAGAAATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAA

Gap no gap
Contig length 820
Chromosome number (1..6, M) 4
Chromosome length 5430582
Start point 3663908
End point 3664659
Strand (PLUS/MINUS) PLUS
Number of clones 121
Number of EST 142
Link to clone list U16529
List of clone(s)

est1=VFI140Z,-7,206
est2=AFH656F,1,480
est3=AHM614E,1,730
est4=VHG542E,1,753
est5=SSJ287Z,10,775
est6=AHI636Z,14,683
est7=VHG158E,14,680
est8=VHG402E,14,755
est9=VHK589F,15,595
est10=AFC262F,17,559
est11=AFF577E,17,752
est12=AHI636F,17,709
est13=VFG405E,17,761
est14=VFL239E,17,757
est15=VFM307F,17,609
est16=VFM618F,17,609
est17=VHG454F,17,604
est18=AHH569Z,18,761
est19=AHJ841E,18,744
est20=VFJ167Z,18,753
est21=AHB807Z,19,761
est22=VFF841E,19,759
est23=VFG620Z,19,496
est24=VHC822Z,19,757
est25=AHB807F,20,608
est26=AHE127E,20,761
est27=AHG682E,20,773
est28=AHH209E,20,761
est29=AHH433E,20,761
est30=AHQ209E,20,592
est31=VFB831F,20,603
est32=VFC575E,20,771
est33=VFG620F,20,609
est34=VFH215F,20,606
est35=VFI659F,20,610
est36=VHB484F,20,606
est37=VHC822F,20,698
est38=VHL872E,20,740
est39=VFM307Z,22,411
est40=VFO394Z,22,342
est41=VFH671Z,23,262
est42=VHI760F,24,588
est43=AHN890E,25,730
est44=VFN638F,25,607
est45=AHQ222E,26,761
est46=VFI346F,26,599
est47=VFI659Z,26,386
est48=VHB309F,27,703
est49=VFM280Z,28,673
est50=VHI219F,28,603
est51=VHH812F,34,685
est52=SSD166F,35,630
est53=VFM355F,35,598
est54=AFB502F,36,562
est55=VFJ167F,36,608
est56=VFA822F,37,700
est57=VHB309Z,37,534
est58=VFA822Z,38,383
est59=SSD548F,39,588
est60=VSG876F,40,561
est61=SSA641F,44,710
est62=VSI881E,44,759
est63=VHF821E,47,742
est64=AHH569F,49,518
est65=AHP857E,49,761
est66=SSJ220E,49,787
est67=VHI760Z,57,407
est68=SSK494Z,59,783
est69=SSC332Z,63,781
est70=SSC587Z,70,785
est71=SSK866Z,73,791
est72=SSI186Z,86,797
est73=SSJ253Z,95,797
est74=SSJ652Z,106,788
est75=SSK613Z,106,756
est76=VHI219Z,114,231
est77=VFH364F,122,732
est78=SSF496Z,127,790
est79=SSF771Z,133,793
est80=VFL159Z,137,295
est81=SSE517Z,139,790
est82=SSF409Z,139,776
est83=SSG844Z,139,787
est84=VFM355Z,154,397
est85=SSF108Z,156,782
est86=SSE151Z,159,787
est87=SSE177Z,161,789
est88=SSF568Z,162,787
est89=SSM310Z,162,780
est90=VFJ103F,164,439
est91=SSD288Z,165,788
est92=SSM611Z,165,789
est93=AHP549E,166,571
est94=VFC423Z,167,758
est95=VSC180Z,168,777
est96=VFB831Z,175,359
est97=SSH868Z,177,811
est98=SSK374Z,182,764
est99=SSI642Z,186,790
est100=SSH867Z,193,798
est101=SSB233Z,212,776
est102=SSF480Z,233,812
est103=AHH833Z,252,490
est104=VSB653Z,265,817
est105=VSG727F,272,511
est106=SSA256Z,282,788
est107=AHK306F,289,789
est108=AHK306Z,289,776
est109=FC-IC0626F,289,775
est110=FC-IC0626Z,289,715
est111=FC-IC1406Z,289,781
est112=SLG432Z,306,785
est113=FC-AM15Z,310,814
est114=SSE320Z,329,792
est115=SSI188Z,332,791
est116=SSH252Z,334,794
est117=SSB732Z,344,817
est118=VFC169Z,348,741
est119=VSJ503E,365,760
est120=SSB572Z,371,780
est121=VFJ621F,385,784
est122=AFL163Z,418,576
est123=SSB106Z,423,779
est124=FC-AF12E,428,741
est125=SSH771Z,429,780
est126=VFH364Z,432,727
est127=VFJ253Z,450,740
est128=VFJ253F,452,784
est129=VSJ679F,502,784
est130=VSE809E,503,775
est131=VSJ679Z,503,760
est132=SSL404Z,533,790
est133=VSB870E,533,820
est134=VSD246F,533,779
est135=VSD246Z,533,755
est136=AHN352F,604,786
est137=AHN352Z,604,761
est138=VSH889F,606,784
est139=VSH889Z,606,768
est140=VSE472E,624,776
est141=VSJ370F,633,784
est142=VSJ370Z,633,760
Translated Amino Acid sequence
tvglld*infkskrysikn*KMSVDANKVKFFFGKNCTGESFEYNKGETVRFNNGDKWND
KFMSCLVGSNVRCNIWEHNEIDTPTPGKFQELAQGSTNNDLTSINGLSKFQVLPGAFQWA
VDVKIVNKVNSTAGSYEMTITPYQVDKVACKDGDDFVQLPIPKLTPPDSEIVSHLTVRQT
HTPYDYVVNGSVYFKYSPTTGQVTVIKKDETFPKNMTVTQDDNTSFIFNLNSEK*nnmff
flfkktlnnkimnfrn*kkkkkkkkkkkkkkkk


Translated Amino Acid sequence (All Frames)
Frame A:
tvglld*infkskrysikn*KMSVDANKVKFFFGKNCTGESFEYNKGETVRFNNGDKWND
KFMSCLVGSNVRCNIWEHNEIDTPTPGKFQELAQGSTNNDLTSINGLSKFQVLPGAFQWA
VDVKIVNKVNSTAGSYEMTITPYQVDKVACKDGDDFVQLPIPKLTPPDSEIVSHLTVRQT
HTPYDYVVNGSVYFKYSPTTGQVTVIKKDETFPKNMTVTQDDNTSFIFNLNSEK*nnmff
flfkktlnnkimnfrn*kkkkkkkkkkkkkkkk


Frame B:
llaywik*iskvkgivlkikkcllmqik*nsslvktalvnhlnttkvkl*dstmvingmi
nschvwlvqmldvtfgsimklilqlqensknwlkavqtmi*pq*mvfqssksyqelfngq
lmlklstkliqllvhmk*pllhtklirllakmvmtlfncqfqnllhqilkllai*qfvkh
ihhmtml*mevftlntpqqlaklqllkkmrhsqri*llhkmiihlsslt*tlknkticff
fslrkl*iikl*iseikkkkkkkkkkkkkkkkk


Frame C:
cwptglnkfqk*kv*y*klknvc*ck*skillw*klhw*ii*iqqr*nckiqqw**me**
ihvmfgwfkc*m*hlga**n*ysnsrkiprigsrqykq*fnlnkwsfkvpsltrsfsmgs
*c*ncqqs*fncwfi*ndhysips**gclqrw**lcsiansktystrf*nc*pfnsssnt
yti*lcckwkcll*ilpnnwpsysy*kr*dipkeydcytr**yifhl*lkl*kikqyvff
sl*enfk**nyefqklkkkkkkkkkkkkkkkk


own update 2004. 6.23
Homology vs CSM-cDNA
Query= Contig-U16529-1 (Contig-U16529-1Q)
/CSM_Contig/Contig-U16529-1Q.Seq.d
(820 letters)

Database: CSM
8402 sequences; 8,075,542 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U16529-1 (Contig-U16529-1Q) /CSM_Contig/Conti... 1344 0.0
Contig-U15942-1 (Contig-U15942-1Q) /CSM_Contig/Conti... 103 4e-22
Contig-U14056-1 (Contig-U14056-1Q) /CSM_Contig/Conti... 42 0.001
Contig-U16535-1 (Contig-U16535-1Q) /CSM_Contig/Conti... 36 0.082
Contig-U16533-1 (Contig-U16533-1Q) /CSM_Contig/Conti... 36 0.082
Contig-U13172-1 (Contig-U13172-1Q) /CSM_Contig/Conti... 36 0.082
Contig-U13171-1 (Contig-U13171-1Q) /CSM_Contig/Conti... 36 0.082
Contig-U04416-1 (Contig-U04416-1Q) /CSM_Contig/Conti... 36 0.082
Contig-U15822-1 (Contig-U15822-1Q) /CSM_Contig/Conti... 34 0.33
Contig-U15308-1 (Contig-U15308-1Q) /CSM_Contig/Conti... 34 0.33

>Contig-U16529-1 (Contig-U16529-1Q) /CSM_Contig/Contig-U16529-1Q.Seq.d
Length = 820

Score = 1344 bits (678), Expect = 0.0
Identities = 696/705 (98%)
Strand = Plus / Plus


Query: 65 tgtctgttgatgcaaataaagtaaaattcttctttggtaaaaactgcactggtgaatcat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 tgtctgttgatgcaaataaagtaaaattcttctttggtaaaaactgcactggtgaatcat 124


Query: 125 ttgaatacaacaaaggtgaaactgtaagattcaacaatggtgataaatggaatgataaat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 ttgaatacaacaaaggtgaaactgtaagattcaacaatggtgataaatggaatgataaat 184


Query: 185 tcatgtcatgtttggttggttcaaatgttagatgtaacatttgggagcataatgaaattg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 tcatgtcatgtttggttggttcaaatgttagatgtaacatttgggagcataatgaaattg 244


Query: 245 atactccaactccaggaaaattccaagaattggctcaaggcagtacaaacaatgatttaa 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 atactccaactccaggaaaattccaagaattggctcaaggcagtacaaacaatgatttaa 304


Query: 305 cctcaataaatggtctttcaaagttccaagtcttaccaggagcttttcaatgggcagttg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 cctcaataaatggtctttcaaagttccaagtcttaccaggagcttttcaatgggcagttg 364


Query: 365 atgttaaaattgtcaacaaagttaattcaactgctggttcatatgaaatgaccattactc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 atgttaaaattgtcaacaaagttaattcaactgctggttcatatgaaatgaccattactc 424


Query: 425 cataccaagttgataaggttgcttgcaaagatggtgatgactttgttcaattgccaattc 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 cataccaagttgataaggttgcttgcaaagatggtgatgactttgttcaattgccaattc 484


Query: 485 caaaacttactccaccagattctgaaattgttagccatttaacagttcgtcaaacacata 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 caaaacttactccaccagattctgaaattgttagccatttaacagttcgtcaaacacata 544


Query: 545 caccatatgactatgttgtaaatggaagtgtttactttaaatactccccaacaactggcc 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 caccatatgactatgttgtaaatggaagtgtttactttaaatactccccaacaactggcc 604


Query: 605 aagttacagttattaaaaaagatgagacattcccaaagaatatgactgttacacaagatg 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 aagttacagttattaaaaaagatgagacattcccaaagaatatgactgttacacaagatg 664


Query: 665 ataatacatctttcatctttaacttaaactctgaaaaataaaacaatatgnnnnnnnnnc 724
|||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 665 ataatacatctttcatctttaacttaaactctgaaaaataaaacaatatgtttttttttc 724


Query: 725 tctttaagaaaactttaaataataaaattatgaatttcagaaatt 769
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 725 tctttaagaaaactttaaataataaaattatgaatttcagaaatt 769


Score = 30.2 bits (15), Expect = 5.1
Identities = 15/15 (100%)
Strand = Plus / Plus


Query: 1 actgttggcctactg 15
|||||||||||||||
Sbjct: 1 actgttggcctactg 15


>Contig-U15942-1 (Contig-U15942-1Q) /CSM_Contig/Contig-U15942-1Q.Seq.d
Length = 1874

Score = 103 bits (52), Expect = 4e-22
Identities = 52/52 (100%)
Strand = Plus / Plus


Query: 663 tgataatacatctttcatctttaacttaaactctgaaaaataaaacaatatg 714
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1158 tgataatacatctttcatctttaacttaaactctgaaaaataaaacaatatg 1209


>Contig-U14056-1 (Contig-U14056-1Q) /CSM_Contig/Contig-U14056-1Q.Seq.d
Length = 771

Score = 42.1 bits (21), Expect = 0.001
Identities = 21/21 (100%)
Strand = Plus / Plus


Query: 495 tccaccagattctgaaattgt 515
|||||||||||||||||||||
Sbjct: 462 tccaccagattctgaaattgt 482


Database: CSM
Posted date: Jun 21, 2004 1:35 PM
Number of letters in database: 8,075,542
Number of sequences in database: 8402

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 15,705
Number of Sequences: 8402
Number of extensions: 15705
Number of successful extensions: 2216
Number of sequences better than 10.0: 650
length of query: 820
length of database: 8,075,542
effective HSP length: 16
effective length of query: 804
effective length of database: 7,941,110
effective search space: 6384652440
effective search space used: 6384652440
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2009. 4.12
Homology vs DNA
Query= Contig-U16529-1 (Contig-U16529-1Q) /CSM_Contig/Contig-U16529-1Q.Seq.d
(820 letters)

Database: ddbj_A
102,105,510 sequences; 101,790,757,118 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(C94392) Dictyostelium discoideum slug cDNA, clone SSK613. 1203 0.0 1
(C91961) Dictyostelium discoideum slug cDNA, clone SSC587. 1203 0.0 2
(C91121) Dictyostelium discoideum slug cDNA, clone SSJ652. 1203 0.0 2
(BJ432722) Dictyostelium discoideum cDNA clone:ddv19e17, 3' ... 1203 0.0 2
(BJ438038) Dictyostelium discoideum cDNA clone:ddv36l06, 3' ... 1197 0.0 2
(BJ351983) Dictyostelium discoideum cDNA clone:dda45b10, 3' ... 1197 0.0 2
(BJ350267) Dictyostelium discoideum cDNA clone:dda39e07, 3' ... 1197 0.0 2
(BJ348734) Dictyostelium discoideum cDNA clone:dda34n02, 3' ... 1197 0.0 2
(C91339) Dictyostelium discoideum slug cDNA, clone SSK494. 1195 0.0 2
(U49650) Dictyostelium discoideum calcium-dependent cell adh... 1185 0.0 1
(BJ352395) Dictyostelium discoideum cDNA clone:dda46i17, 3' ... 1181 0.0 2
(BJ357113) Dictyostelium discoideum cDNA clone:dda62b16, 3' ... 1179 0.0 2
(BJ355229) Dictyostelium discoideum cDNA clone:dda56k04, 3' ... 1179 0.0 1
(BJ334935) Dictyostelium discoideum cDNA clone:dda48g10, 5' ... 1179 0.0 1
(AU076357) Dictyostelium discoideum slug cDNA, clone SSA641. 1176 0.0 1
(BJ418510) Dictyostelium discoideum cDNA clone:ddv33b03, 5' ... 1176 0.0 1
(BJ413480) Dictyostelium discoideum cDNA clone:ddv15p15, 5' ... 1176 0.0 1
(BJ430308) Dictyostelium discoideum cDNA clone:ddv6e19, 3' e... 1170 0.0 3
(BJ443951) Dictyostelium discoideum cDNA clone:ddv54p18, 3' ... 1166 0.0 2
(BJ419454) Dictyostelium discoideum cDNA clone:ddv36l06, 5' ... 1166 0.0 1
(BJ410868) Dictyostelium discoideum cDNA clone:ddv2l06, 5' e... 1166 0.0 1
(BJ357314) Dictyostelium discoideum cDNA clone:dda63k06, 3' ... 1166 0.0 3
(C93031) Dictyostelium discoideum slug cDNA, clone SSF496. 1164 0.0 2
(C92927) Dictyostelium discoideum slug cDNA, clone SSF771. 1162 0.0 2
(C90176) Dictyostelium discoideum slug cDNA, clone SSI186. 1160 0.0 3
(BJ433944) Dictyostelium discoideum cDNA clone:ddv23m10, 3' ... 1158 0.0 3
(BJ351905) Dictyostelium discoideum cDNA clone:dda45a04, 3' ... 1158 0.0 3
(C92980) Dictyostelium discoideum slug cDNA, clone SSF409. 1150 0.0 2
(C92519) Dictyostelium discoideum slug cDNA, clone SSE517. 1150 0.0 2
(C89786) Dictyostelium discoideum slug cDNA, clone SSG844. 1150 0.0 2
(BJ353460) Dictyostelium discoideum cDNA clone:dda50b12, 3' ... 1146 0.0 3
(BJ338816) Dictyostelium discoideum cDNA clone:dda63k06, 5' ... 1144 0.0 1
(BJ422494) Dictyostelium discoideum cDNA clone:ddv46h04, 5' ... 1142 0.0 1
(BJ428514) Dictyostelium discoideum cDNA clone:ddv12b12, 3' ... 1136 0.0 3
(C94348) Dictyostelium discoideum slug cDNA, clone SSK866. 1124 0.0 3
(C92931) Dictyostelium discoideum slug cDNA, clone SSF108. 1118 0.0 2
(BJ352911) Dictyostelium discoideum cDNA clone:dda48g10, 3' ... 1118 0.0 1
(AU039039) Dictyostelium discoideum slug cDNA, clone SSM310. 1108 0.0 2
(C93312) Dictyostelium discoideum slug cDNA, clone SSM611. 1102 0.0 2
(C92247) Dictyostelium discoideum slug cDNA, clone SSD288. 1102 0.0 2
(C92640) Dictyostelium discoideum slug cDNA, clone SSF568. 1100 0.0 2
(C90843) Dictyostelium discoideum slug cDNA, clone SSJ220. 1094 0.0 3
(BJ421688) Dictyostelium discoideum cDNA clone:ddv43c15, 5' ... 1092 0.0 1
(BJ332486) Dictyostelium discoideum cDNA clone:dda39e07, 5' ... 1090 0.0 1
(BJ439939) Dictyostelium discoideum cDNA clone:ddv42j06, 3' ... 1088 0.0 2
(AU262383) Dictyostelium discoideum vegetative cDNA clone:VS... 1084 0.0 2
(BJ440628) Dictyostelium discoideum cDNA clone:ddv44c11, 3' ... 1080 0.0 2
(AU038560) Dictyostelium discoideum slug cDNA, clone SSH868. 1078 0.0 2
(AU269384) Dictyostelium discoideum vegetative cDNA clone:VS... 1072 0.0 3
(BJ440221) Dictyostelium discoideum cDNA clone:ddv43d02, 3' ... 1072 0.0 2
(BJ431174) Dictyostelium discoideum cDNA clone:ddv13j02, 3' ... 1072 0.0 2
(C91513) Dictyostelium discoideum slug cDNA, clone SSK374. 1068 0.0 2
(C90504) Dictyostelium discoideum slug cDNA, clone SSI642. 1061 0.0 2
(U20997) Dictyostelium discoideum putative 25 kDa protein mR... 1055 0.0 3
(AU038559) Dictyostelium discoideum slug cDNA, clone SSH867. 1047 0.0 2
(C90902) Dictyostelium discoideum slug cDNA, clone SSJ287. 874 0.0 6
(C90872) Dictyostelium discoideum slug cDNA, clone SSJ253. 714 0.0 3
(AU051891) Dictyostelium discoideum slug cDNA, clone SSC332. 660 0.0 3
(AF340153) Dictyostelium discoideum calcium-dependent cell a... 628 0.0 4
(BJ429875) Dictyostelium discoideum cDNA clone:ddv5n06, 3' e... 1082 0.0 2
(BJ435063) Dictyostelium discoideum cDNA clone:ddv25o20, 3' ... 1043 0.0 2
(AU037665) Dictyostelium discoideum slug cDNA, clone SSE151. 930 0.0 4
(AU037055) Dictyostelium discoideum slug cDNA, clone SSB233. 1009 0.0 2
(AU037690) Dictyostelium discoideum slug cDNA, clone SSE177. 815 0.0 5
(BJ340382) Dictyostelium discoideum cDNA clone:dda12i19, 3' ... 1025 0.0 2
(BJ410365) Dictyostelium discoideum cDNA clone:ddv12b12, 5' ... 1051 0.0 1
(BJ351836) Dictyostelium discoideum cDNA clone:dda44c22, 3' ... 1001 0.0 2
(BJ421921) Dictyostelium discoideum cDNA clone:ddv44c11, 5' ... 1035 0.0 2
(BJ334133) Dictyostelium discoideum cDNA clone:dda45b10, 5' ... 1037 0.0 1
(BJ337070) Dictyostelium discoideum cDNA clone:dda56k04, 5' ... 1029 0.0 2
(C93018) Dictyostelium discoideum slug cDNA, clone SSF480. 936 0.0 2
(BJ421735) Dictyostelium discoideum cDNA clone:ddv43l14, 5' ... 989 0.0 1
(BJ422791) Dictyostelium discoideum cDNA clone:ddv47e06, 5' ... 987 0.0 1
(BJ339633) Dictyostelium discoideum cDNA clone:dda58d24, 5' ... 987 0.0 1
(BJ416170) Dictyostelium discoideum cDNA clone:ddv25n01, 5' ... 985 0.0 1
(BJ413070) Dictyostelium discoideum cDNA clone:ddv14g06, 5' ... 985 0.0 1
(BJ334000) Dictyostelium discoideum cDNA clone:dda44c22, 5' ... 985 0.0 1
(BJ331175) Dictyostelium discoideum cDNA clone:dda34n02, 5' ... 985 0.0 1
(BJ421542) Dictyostelium discoideum cDNA clone:ddv43d02, 5' ... 983 0.0 1
(BJ418744) Dictyostelium discoideum cDNA clone:ddv33h22, 5' ... 983 0.0 1
(BJ414546) Dictyostelium discoideum cDNA clone:ddv19e17, 5' ... 983 0.0 1
(BJ335447) Dictyostelium discoideum cDNA clone:dda50b12, 5' ... 983 0.0 1
(BJ417670) Dictyostelium discoideum cDNA clone:ddv28k10, 5' ... 981 0.0 1
(BJ413346) Dictyostelium discoideum cDNA clone:ddv15m04, 5' ... 979 0.0 1
(BJ415701) Dictyostelium discoideum cDNA clone:ddv23m10, 5' ... 977 0.0 1
(BJ425128) Dictyostelium discoideum cDNA clone:ddv54p18, 5' ... 973 0.0 1
(BJ411437) Dictyostelium discoideum cDNA clone:ddv4n08, 5' e... 973 0.0 1
(BJ334062) Dictyostelium discoideum cDNA clone:dda45a04, 5' ... 973 0.0 1
(BJ414254) Dictyostelium discoideum cDNA clone:ddv18e16, 5' ... 916 0.0 2
(BJ416627) Dictyostelium discoideum cDNA clone:ddv26c06, 5' ... 916 0.0 2
(AU262161) Dictyostelium discoideum vegetative cDNA clone:VS... 898 0.0 2
(BJ424524) Dictyostelium discoideum cDNA clone:ddv52a23, 5' ... 963 0.0 1
(BJ416295) Dictyostelium discoideum cDNA clone:ddv25n13, 5' ... 963 0.0 1
(BJ323910) Dictyostelium discoideum cDNA clone:dda12i19, 5' ... 961 0.0 1
(BJ413922) Dictyostelium discoideum cDNA clone:ddv17l11, 5' ... 957 0.0 1
(BJ423256) Dictyostelium discoideum cDNA clone:ddv48h15, 5' ... 950 0.0 1
(AU051804) Dictyostelium discoideum slug cDNA, clone SSA256. 870 0.0 2
(BJ412052) Dictyostelium discoideum cDNA clone:ddv6e19, 5' e... 930 0.0 1
(BJ412856) Dictyostelium discoideum cDNA clone:ddv13j02, 5' ... 926 0.0 1
(BJ357267) Dictyostelium discoideum cDNA clone:dda63a04, 3' ... 902 0.0 2
(AU272473) Dictyostelium discoideum gamete cDNA clone:FC-IC1... 844 0.0 2
(BJ323941) Dictyostelium discoideum cDNA clone:dda4c01, 5' e... 896 0.0 1
(AU266890) Dictyostelium discoideum vegetative cDNA clone:VS... 892 0.0 1
(AU039790) Dictyostelium discoideum slug cDNA, clone SLG432. 823 0.0 2
(BJ324292) Dictyostelium discoideum cDNA clone:dda5k16, 5' e... 890 0.0 1
(BJ355962) Dictyostelium discoideum cDNA clone:dda58d24, 3' ... 844 0.0 2
(AU271741) Dictyostelium discoideum gamete cDNA clone:FC-IC0... 751 0.0 3
(AU284334) Dictyostelium discoideum gamete cDNA clone:FC-AM1... 773 0.0 3
(AU037807) Dictyostelium discoideum slug cDNA, clone SSE320. 743 0.0 3
(AU038084) Dictyostelium discoideum slug cDNA, clone SSH252. 749 0.0 2
(C90177) Dictyostelium discoideum slug cDNA, clone SSI188. 747 0.0 2
(BJ349814) Dictyostelium discoideum cDNA clone:dda37a21, 3' ... 771 0.0 2
(BJ338770) Dictyostelium discoideum cDNA clone:dda63a04, 5' ... 801 0.0 1
(BJ437037) Dictyostelium discoideum cDNA clone:ddv33b03, 3' ... 779 0.0 1
(BJ334489) Dictyostelium discoideum cDNA clone:dda46i17, 5' ... 771 0.0 1
(AU037298) Dictyostelium discoideum slug cDNA, clone SSB732. 698 0.0 2
(BJ335672) Dictyostelium discoideum cDNA clone:dda51l01, 5' ... 694 0.0 2
(AU037177) Dictyostelium discoideum slug cDNA, clone SSB572. 676 0.0 2
(BJ326497) Dictyostelium discoideum cDNA clone:dda16o14, 5' ... 737 0.0 2
(BJ357108) Dictyostelium discoideum cDNA clone:dda62a13, 3' ... 684 0.0 2
(BJ431408) Dictyostelium discoideum cDNA clone:ddv14g06, 3' ... 718 0.0 1
(BJ353699) Dictyostelium discoideum cDNA clone:dda51l01, 3' ... 656 0.0 3
(AU270020) Dictyostelium discoideum vegetative cDNA clone:VS... 642 0.0 2
(BJ429972) Dictyostelium discoideum cDNA clone:ddv5i17, 3' e... 624 0.0 2
(AU269383) Dictyostelium discoideum vegetative cDNA clone:VS... 678 0.0 1
(BJ414687) Dictyostelium discoideum cDNA clone:ddv20i06, 5' ... 478 0.0 3
(AU038480) Dictyostelium discoideum slug cDNA, clone SSH771. 581 0.0 2
(AU270019) Dictyostelium discoideum vegetative cDNA clone:VS... 642 e-180 1
(AU051988) Dictyostelium discoideum slug cDNA, clone SSB106. 480 e-168 3
(BJ434855) Dictyostelium discoideum cDNA clone:ddv25n01, 3' ... 595 e-165 1
(BJ338663) Dictyostelium discoideum cDNA clone:dda62b16, 5' ... 559 e-163 2
(BJ414558) Dictyostelium discoideum cDNA clone:ddv19i14, 5' ... 478 e-160 3
(AU284265) Dictyostelium discoideum gamete cDNA clone:FC-AF1... 571 e-158 1
(BJ431826) Dictyostelium discoideum cDNA clone:ddv15p15, 3' ... 557 e-154 1
(BJ432734) Dictyostelium discoideum cDNA clone:ddv19i14, 3' ... 529 e-146 1
(BJ429038) Dictyostelium discoideum cDNA clone:ddv2l06, 3' e... 509 e-140 1
(BJ414399) Dictyostelium discoideum cDNA clone:ddv19e01, 5' ... 507 e-139 1
(BJ432388) Dictyostelium discoideum cDNA clone:ddv18e16, 3' ... 462 e-138 2
(AU263394) Dictyostelium discoideum vegetative cDNA clone:VS... 428 e-136 2
(AU271742) Dictyostelium discoideum gamete cDNA clone:FC-IC0... 293 e-134 5
(AU270306) Dictyostelium discoideum vegetative cDNA clone:VS... 420 e-134 2
(BJ440383) Dictyostelium discoideum cDNA clone:ddv43c15, 3' ... 480 e-131 1
(AU270307) Dictyostelium discoideum vegetative cDNA clone:VS... 428 e-128 2
(BJ434984) Dictyostelium discoideum cDNA clone:ddv25n13, 3' ... 466 e-127 1
(BJ436088) Dictyostelium discoideum cDNA clone:ddv29l23, 3' ... 460 e-125 1
(BJ442021) Dictyostelium discoideum cDNA clone:ddv48h15, 3' ... 281 e-122 2
(AU038726) Dictyostelium discoideum slug cDNA, clone SSL404. 381 e-122 2
(AU263710) Dictyostelium discoideum vegetative cDNA clone:VS... 369 e-117 2
(AU262306) Dictyostelium discoideum vegetative cDNA clone:VS... 355 e-113 2
(BJ421299) Dictyostelium discoideum cDNA clone:ddv42j06, 5' ... 381 e-101 1
(BJ352287) Dictyostelium discoideum cDNA clone:dda46b10, 3' ... 373 7e-99 1
(AU263711) Dictyostelium discoideum vegetative cDNA clone:VS... 335 1e-97 3
(AU072161) Dictyostelium discoideum slug cDNA, clone SSD548. 339 1e-88 1
(AU072003) Dictyostelium discoideum slug cDNA, clone SSD166. 331 2e-86 1
(BJ338656) Dictyostelium discoideum cDNA clone:dda62a13, 5' ... 325 2e-84 1
(AU266758) Dictyostelium discoideum vegetative cDNA clone:VS... 321 2e-83 1
(BJ337476) Dictyostelium discoideum cDNA clone:dda57h13, 5' ... 228 1e-76 2
(AU268133) Dictyostelium discoideum vegetative cDNA clone:VS... 226 5e-76 2
(BJ434370) Dictyostelium discoideum cDNA clone:ddv16m18, 3' ... 240 2e-72 2
(AU268134) Dictyostelium discoideum vegetative cDNA clone:VS... 226 1e-67 2
(BJ355590) Dictyostelium discoideum cDNA clone:dda57h13, 3' ... 222 7e-66 2
(BJ429655) Dictyostelium discoideum cDNA clone:ddv4n08, 3' e... 246 3e-65 2
(AU263133) Dictyostelium discoideum vegetative cDNA clone:VS... 190 3e-65 2
(BJ433983) Dictyostelium discoideum cDNA clone:ddv23e15, 3' ... 254 5e-63 1
(AU269821) Dictyostelium discoideum vegetative cDNA clone:VS... 172 6e-60 2
(AU269822) Dictyostelium discoideum vegetative cDNA clone:VS... 172 1e-51 2
(BJ345430) Dictyostelium discoideum cDNA clone:dda23m15, 3' ... 127 4e-51 2
(BJ432048) Dictyostelium discoideum cDNA clone:ddv17o09, 3' ... 192 1e-44 1
(BJ441548) Dictyostelium discoideum cDNA clone:ddv47e06, 3' ... 163 1e-41 2
(AU266882) Dictyostelium discoideum vegetative cDNA clone:VS... 103 1e-17 1
(CU525807) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 52 0.034 1
(AC226657) Sus scrofa clone RP44-337L8, WORKING DRAFT SEQUEN... 52 0.034 1
(CT030005) Zebrafish DNA sequence from clone DKEY-206D17 in ... 34 0.30 2
(AC182490) Pan troglodytes BAC clone CH251-430P12 from chrom... 48 0.54 1
(AC120782) Pan troglodytes clone rp43-45g12, complete sequence. 48 0.54 1
(AC120781) Pan troglodytes clone rp43-28m17, complete sequence. 48 0.54 1
(AC145214) Homo sapiens fosmid clone XXFOS-82587F5 from 2, c... 48 0.54 1
(AC073869) Homo sapiens BAC clone RP11-109E12 from 2, comple... 48 0.54 1
(AC120839) Pan troglodytes clone rp43-5n22, WORKING DRAFT SE... 48 0.54 1
(AC022629) Homo sapiens clone RP11-24O13, WORKING DRAFT SEQU... 48 0.54 1
(ET984412) CHO_OF224xc03r1.ab1 CHO_OF Nicotiana tabacum geno... 48 0.54 1
(FL781784) CCGF11406.g1 CCGF Panicum virgatum early floral b... 48 0.54 1
(AC116551) Dictyostelium discoideum chromosome 2 map complem... 40 0.82 7
(CR405705) Zebrafish DNA sequence from clone DKEY-64E13 in l... 36 1.1 2
(AL672088) Zebrafish DNA sequence from clone BUSM1-153O2 Con... 36 1.2 2
(CJ454689) Macaca fascicularis mRNA, clone: QflA-20440, 5' e... 32 2.0 3
(AC153657) Mus musculus BAC clone RP23-324B3 from chromosome... 46 2.1 1
(AC124492) Mus musculus BAC clone RP23-454I23 from chromosom... 46 2.1 1
(AL161574) Arabidopsis thaliana DNA chromosome 4, contig fra... 46 2.1 1
(AC093258) Homo sapiens chromosome 5 clone RP11-1E3, complet... 46 2.1 1
(AC126869) Rattus norvegicus clone CH230-105N22, *** SEQUENC... 46 2.1 1
(AL096692) Arabidopsis thaliana DNA *** SEQUENCING IN PROGRE... 46 2.1 1
(AC023526) Homo sapiens clone RP11-587F19, WORKING DRAFT SEQ... 46 2.1 1
(BZ357365) SALK_130634.51.25.x Arabidopsis thaliana TDNA ins... 46 2.1 1
(AG120353) Pan troglodytes DNA, clone: PTB-129B05.F. 46 2.1 1
(CX021628) EST939947 Field isolate cDNA library Plasmodium v... 46 2.1 1
(CV646527) EST925280 Field isolate cDNA library Plasmodium v... 46 2.1 1
(CV643742) EST922495 Field isolate cDNA library Plasmodium v... 46 2.1 1
(CU457484) Zebrafish DNA sequence from clone CH73-51A11 in l... 44 2.7 2
(EY877371) CL06-C4-501-063-D09-CT.F Rangpur lime root, plant... 34 2.8 3
(BJ392248) Dictyostelium discoideum cDNA clone:dds26o22, 5' ... 30 4.1 3
(FP090891) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 40 4.1 2
(AC111966) Rattus norvegicus clone CH230-185O4, *** SEQUENCI... 42 5.0 3
(CJ459637) Macaca fascicularis mRNA, clone: QmoA-11889, 5' e... 36 5.3 2
(GH538819) CCUH4889.b1 CCUH Peromyscus maniculatus bairdii B... 32 5.4 2
(DB601611) Halocynthia roretzi cDNA clone:ma330n19, 3' end. 34 5.4 2
(EK176154) 1095458098312 Global-Ocean-Sampling_GS-31-01-01-1... 40 6.0 2
(AL772312) Mouse DNA sequence from clone RP23-91D16 on chrom... 44 8.4 1
(AY747697) Pisum sativum variety Slow iron reductase (FRO1) ... 44 8.4 1
(AY747696) Pisum sativum variety JI1794 iron reductase (FRO1... 44 8.4 1
(AP009629) Lotus japonicus genomic DNA, chromosome 4, clone:... 44 8.4 1
(AM465878) Vitis vinifera contig VV78X010608.8, whole genome... 44 8.4 1
(AC021393) Homo sapiens chromosome 8, clone RP11-27P7, compl... 44 8.4 1
(AC162770) Takifugu rubripes clone MRC-186J3, WORKING DRAFT ... 44 8.4 1
(AC131192) Rattus norvegicus clone CH230-2O24, *** SEQUENCIN... 44 8.4 1
(AC125729) Rattus norvegicus clone CH230-5I13, *** SEQUENCIN... 44 8.4 1
(AC121041) Rattus norvegicus clone CH230-421A1, *** SEQUENCI... 44 8.4 1
(CU896576) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 44 8.4 1
(AC069520) Homo sapiens chromosome 3 clone RP11-269A14, WORK... 44 8.4 1
(AC230930) Bos taurus clone CH240-495P12, WORKING DRAFT SEQU... 44 8.4 1
(AC229602) Homo sapiens chromosome UNKNOWN clone ABC10-44703... 44 8.4 1
(AC218239) Bos taurus clone CH240-290D1, WORKING DRAFT SEQUE... 44 8.4 1
(AC169299) Bos taurus clone CH240-203F7, WORKING DRAFT SEQUE... 44 8.4 1
(AC164754) Bos taurus clone CH240-155K12, *** SEQUENCING IN ... 44 8.4 1
(EK488090) 1095500041141 Global-Ocean-Sampling_GS-32-01-01-1... 44 8.4 1
(EK486784) 1095500032571 Global-Ocean-Sampling_GS-32-01-01-1... 44 8.4 1
(EK101953) 1092963021686 Global-Ocean-Sampling_GS-31-01-01-1... 44 8.4 1
(EJ999163) 1093025007794 Global-Ocean-Sampling_GS-30-02-01-1... 44 8.4 1
(EI715293) 2B421007H24TR BAC library from breast tumor sampl... 44 8.4 1
(EI160410) DH027O05_F1.ab1 Brachypodium distachyon Bd21 Hind... 44 8.4 1
(AG040271) Pan troglodytes DNA, clone: PTB-017K02.F. 44 8.4 1
(CA612222) wr1.pk0141.e3 wr1 Triticum aestivum cDNA clone wr... 44 8.4 1
(GE024230) 454GmaGlobSeed766878 Soybean Seeds Containing Glo... 44 8.4 1
(BX927303) Zebrafish DNA sequence from clone CH211-67L13 in ... 38 9.3 8
(DJ358586) METHODS AND NUCLEIC ACIDS FOR THE ANALYSIS OF GEN... 36 9.9 2
(DJ358562) METHODS AND NUCLEIC ACIDS FOR THE ANALYSIS OF GEN... 36 9.9 2
(CS114305) Sequence 1063 from Patent WO2005054517. 36 9.9 2
(CS114281) Sequence 1039 from Patent WO2005054517. 36 9.9 2
(AC097613) Rattus norvegicus clone CH230-152C17, *** SEQUENC... 38 10.0 4

>(C94392) Dictyostelium discoideum slug cDNA, clone SSK613.
Length = 642

Score = 1203 bits (607), Expect = 0.0
Identities = 607/607 (100%)
Strand = Plus / Plus


Query: 108 ctgcactggtgaatcatttgaatacaacaaaggtgaaactgtaagattcaacaatggtga 167
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 ctgcactggtgaatcatttgaatacaacaaaggtgaaactgtaagattcaacaatggtga 64


Query: 168 taaatggaatgataaattcatgtcatgtttggttggttcaaatgttagatgtaacatttg 227
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 taaatggaatgataaattcatgtcatgtttggttggttcaaatgttagatgtaacatttg 124


Query: 228 ggagcataatgaaattgatactccaactccaggaaaattccaagaattggctcaaggcag 287
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 ggagcataatgaaattgatactccaactccaggaaaattccaagaattggctcaaggcag 184


Query: 288 tacaaacaatgatttaacctcaataaatggtctttcaaagttccaagtcttaccaggagc 347
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 tacaaacaatgatttaacctcaataaatggtctttcaaagttccaagtcttaccaggagc 244


Query: 348 ttttcaatgggcagttgatgttaaaattgtcaacaaagttaattcaactgctggttcata 407
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 ttttcaatgggcagttgatgttaaaattgtcaacaaagttaattcaactgctggttcata 304


Query: 408 tgaaatgaccattactccataccaagttgataaggttgcttgcaaagatggtgatgactt 467
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 tgaaatgaccattactccataccaagttgataaggttgcttgcaaagatggtgatgactt 364


Query: 468 tgttcaattgccaattccaaaacttactccaccagattctgaaattgttagccatttaac 527
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 tgttcaattgccaattccaaaacttactccaccagattctgaaattgttagccatttaac 424


Query: 528 agttcgtcaaacacatacaccatatgactatgttgtaaatggaagtgtttactttaaata 587
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 agttcgtcaaacacatacaccatatgactatgttgtaaatggaagtgtttactttaaata 484


Query: 588 ctccccaacaactggccaagttacagttattaaaaaagatgagacattcccaaagaatat 647
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 ctccccaacaactggccaagttacagttattaaaaaagatgagacattcccaaagaatat 544


Query: 648 gactgttacacaagatgataatacatctttcatctttaacttaaactctgaaaaataaaa 707
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 gactgttacacaagatgataatacatctttcatctttaacttaaactctgaaaaataaaa 604


Query: 708 caatatg 714
|||||||
Sbjct: 605 caatatg 611

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 102105510
Number of Hits to DB: 886,908,708
Number of extensions: 54935051
Number of successful extensions: 4630579
Number of sequences better than 10.0: 241
Length of query: 820
Length of database: 101,790,757,118
Length adjustment: 24
Effective length of query: 796
Effective length of database: 99,340,224,878
Effective search space: 79074819002888
Effective search space used: 79074819002888
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 7.28
Homology vs Protein
Query= Contig-U16529-1 (Contig-U16529-1Q) /CSM_Contig/Contig-U16529-1Q.Seq.d
(820 letters)

Database: nrp_A
3,268,448 sequences; 1,061,185,681 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

(P54657) RecName: Full=Calcium-dependent cell adhesion molecule ... 443 e-123
U20997_1(U20997|pid:none) Dictyostelium discoideum putative 25 k... 399 e-110
AC116551_17(AC116551|pid:none) Dictyostelium discoideum chromoso... 98 3e-19
AJ575138_1(AJ575138|pid:none) Sordaria macrospora app gene for a... 62 2e-08
BX571864_113(BX571864|pid:none) Photorhabdus luminescens subsp. ... 56 1e-06
(A4YIG5) RecName: Full=Cysteinyl-tRNA synthetase; EC=6.... 34 5.1
CU207366_3569(CU207366|pid:none) Gramella forsetii KT0803 comple... 34 6.6
BA000026_784(BA000026|pid:none) Mycoplasma penetrans HF-2 DNA, c... 33 8.6

>(P54657) RecName: Full=Calcium-dependent cell adhesion molecule 1;
Short=CAD-1; Short=DdCAD-1; AltName:
Full=GP24; &AF340153_1(AF340153|pid:none)
&U49650_1(U49650|pid:none)
Length = 213

Score = 443 bits (1140), Expect = e-123
Identities = 212/212 (100%), Positives = 212/212 (100%)
Frame = +1

Query: 64 MSVDANKVKFFFGKNCTGESFEYNKGETVRFNNGDKWNDKFMSCLVGSNVRCNIWEHNEI 243
MSVDANKVKFFFGKNCTGESFEYNKGETVRFNNGDKWNDKFMSCLVGSNVRCNIWEHNEI
Sbjct: 1 MSVDANKVKFFFGKNCTGESFEYNKGETVRFNNGDKWNDKFMSCLVGSNVRCNIWEHNEI 60

Query: 244 DTPTPGKFQELAQGSTNNDLTSINGLSKFQVLPGAFQWAVDVKIVNKVNSTAGSYEMTIT 423
DTPTPGKFQELAQGSTNNDLTSINGLSKFQVLPGAFQWAVDVKIVNKVNSTAGSYEMTIT
Sbjct: 61 DTPTPGKFQELAQGSTNNDLTSINGLSKFQVLPGAFQWAVDVKIVNKVNSTAGSYEMTIT 120

Query: 424 PYQVDKVACKDGDDFVQLPIPKLTPPDSEIVSHLTVRQTHTPYDYVVNGSVYFKYSPTTG 603
PYQVDKVACKDGDDFVQLPIPKLTPPDSEIVSHLTVRQTHTPYDYVVNGSVYFKYSPTTG
Sbjct: 121 PYQVDKVACKDGDDFVQLPIPKLTPPDSEIVSHLTVRQTHTPYDYVVNGSVYFKYSPTTG 180

Query: 604 QVTVIKKDETFPKNMTVTQDDNTSFIFNLNSE 699
QVTVIKKDETFPKNMTVTQDDNTSFIFNLNSE
Sbjct: 181 QVTVIKKDETFPKNMTVTQDDNTSFIFNLNSE 212

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3268448
Number of Hits to DB: 1,317,060,291
Number of extensions: 27614761
Number of successful extensions: 67679
Number of sequences better than 10.0: 8
Number of HSP's gapped: 67634
Number of HSP's successfully gapped: 8
Length of query: 273
Length of database: 1,061,185,681
Length adjustment: 127
Effective length of query: 146
Effective length of database: 646,092,785
Effective search space: 94329546610
Effective search space used: 94329546610
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.77 gvh: 0.46 alm: 0.45 top: 0.53 tms: 0.00 mit: 0.18 mip: 0.00
nuc: 0.00 erl: 0.00 erm: 0.00 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

52.0 %: cytoplasmic
20.0 %: nuclear
12.0 %: cytoskeletal
4.0 %: mitochondrial
4.0 %: vacuolar
4.0 %: vesicles of secretory system
4.0 %: endoplasmic reticulum

>> prediction for Contig-U16529-1 is cyt

VS (DIR, S) 13
VH (FL, L) 13
VF (FL, S) 26
AH (FL, L) 17
AF (FL, S) 5
SL (DIR, L) 1
SS (DIR, S) 40
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 4
FC-IC (SUB) 2