FR078939
ID FR078939
Second Structure image
[PDF]
Accession AF035778,AF035779,AF035782,AF035783,AF046020,AF079770,AF079771,AF079772,AF079773,AF079774,AF126816,AF126819,AF149926,AF149927,AF149928,AF149929,AF149930,AF149931,AF149932,AF149933,AF149934,AF181708,AF181709,AF181710,AF181713,AF191548,AF191549,AF191550,AF218789,AF218792,AF229489,AF246945,AF246946,AF250818,AF250819,AF250820,AF250822,AF250823,AF250824,AF250825,AF250826,AF250827,AF250828,AF250830,AF250833,AF268182,AF268183,AF268184,AF268185,AF268186,AF268187,AF268188,AF268189,AF268190,AF268191,AF268192,AF272552,AF272553,AF272554,AF297228,AF321323,AF362059,AF362064,AF383951,AF393699,AF422964,AF422966,AF422967,AF422969,AF422971,AF422972,AF422976,AF422981,AF422982,AF422983,AF422991,AF422995,AF437780,AF439458,AF439459,AF439460,AF439461,AF439465,AF439466,AF439468,AF439469,AF439470,AF439473,AF439474,AF439475,AF439476,AF439477,AF439478,AF439479,AF439480,AF439481,AF439482,AF439483,AF439484,AF439485,AF439487,AF439488,AF439489,AF439490,AF439491,AF439492,AF439493,AF439494,AF439495,AF439496,AF439497,AF439498,AF439499,AF439501,AF439502,AF439504,AF439505,AF439506,AF439507,AF439508,AF439509,AF439510,AF443853,AF455395,AF455403,AF455409,AF455447,AF455455,AF455485,AF455486,AF455494,AF455498,AF455518,AF466301,AF466303,AF486626,AF502640,AF502642,AF502700,AF502771,AF502880,AF525674,AF525675,AF525676,AJ002871,AJ244276,AJ246157,AJ279448,AJ279452,AJ279463,AJ279486,AJ293812,AJ306620,AJ310556,AJ310557,AJ400905,AJ428158,AJ428159,AJ428160,AJ428161,AJ428162,AJ428163,AJ428164,AJ428165,AJ428166,AJ428167,AJ428168,AJ428169,AJ428170,AJ428530,AJ428531,AJ428532,AJ428533,AJ428534,AJ428535,AJ437689,AJ493582,AJ496625,AJ496626,AJ496628,AJ496629,AJ496630,AJ496631,AJ496632,AJ534443,AJ542501,AJ542502,AJ550857,AJ550858,AJ550859,AJ550860,AJ550861,AJ550862,AJ550863,AJ550864,AJ550865,AJ550866,AJ550867,AJ550868,AJ550869,AJ550870,AJ550871,AJ550872,AJ550873,AJ550874,AJ550875,AJ550876,AJ550877,AJ550878,AJ550879,AJ550880,AJ550881,AJ550882,AJ550883,AJ550884,AJ550885,AJ550886,AJ550887,AJ550888,AJ550889,AJ550890,AJ550891,AJ550892,AJ608969,AJ608976,AJ890436,AJ971411,AJ972818,AJ972820,AJ972822,AJ972826,AJ972865,AY035665,AY035666,AY083659,AY089978,AY093413,AY131199,AY131200,AY131201,AY131203,AY148443,AY152549,AY152550,AY152551,AY154713,AY157875,AY157876,AY157877,AY157878,AY157879,AY157880,AY157881,AY157882,AY157883,AY157884,AY157885,AY157886,AY157887,AY157888,AY157889,AY160204,AY160213,AY183371,AY188993,AY189705,AY196988,AY206462,AY206463,AY207317,AY207323,AY207324,AY207332,AY207333,AY207334,AY207335,AY207336,AY208148,AY208802,AY208803,AY210335,AY230781,AY268219,AY278318,AY293791,AY293798,AY293799,AY293800,AY293801,AY293803,AY293804,AY303602,AY303611,AY305359,AY305360,AY305361,AY305364,AY305375,AY337712,AY341001,AY341002,AY341003,AY345346,AY345350,AY345351,AY367351,AY372684,AY391835,AY425966,AY465464,AY465465,AY465466,AY465467,AY504634,AY513942,AY513943,AY513944,AY513962,AY513963,AY513965,AY514900,AY521445,AY521446,AY521447,AY521448,AY521449,AY521450,AY531665,AY531666,AY531667,AY531668,AY531669,AY531670,AY531671,AY531672,AY531674,AY531675,AY531676,AY531677,AY531678,AY531679,AY531680,AY531681,AY531682,AY531684,AY531685,AY531687,AY531688,AY531689,AY546006,AY546008,AY546010,AY546017,AY546018,AY546020,AY546042,AY546046,AY546049,AY546057,AY546059,AY550992,AY561217,AY572490,AY587134,AY587138,AY587139,AY607014,AY607022,AY607023,AY618231,AY618247,AY618248,AY618249,AY625064,AY649583,AY649584,AY649585,AY649586,AY649587,AY649588,AY649589,AY649590,AY649591,AY649592,AY649593,AY649594,AY649595,AY649596,AY649597,AY663815,AY663816,AY663817,AY663818,AY663819,AY663820,AY663821,AY663822,AY663823,AY663824,AY663825,AY720708,AY745736,AY745737,AY787697,AY787726,AY787738,AY805558,AY805588,AY805589,AY817682,AY817683,AY817684,AY817686,AY831554,AY831555,AY831556,AY831557,AY831558,AY831559,AY831560,AY831561,AY831562,AY831563,AY836371,AY836373,AY843060,AY843061,AY843068,AY843081,AY843083,AY843085,AY843086,AY843132,AY899262,AY927784,AY965895,DQ008234,DQ026007,DQ026014,DQ068352,DQ068355,DQ092494,DQ093657,DQ093668,DQ093698,DQ093699,DQ093700,DQ093758,DQ093769,DQ096581,DQ096582,DQ096583,DQ096584,DQ096585,DQ096586,DQ096587,DQ096588,DQ096589,DQ096590,DQ096591,DQ096592,DQ096593,DQ109958,DQ109959,DQ109960,DQ133890,DQ133891,DQ133892,DQ133893,L07735,L38711,M96383,M96384,M96663,U04234,U04237,U04861,U04862,U19274,U77357,U77358,U77359,U77360,U77361,U77362,U82451,U82452
Description 5.8S ribosomal RNA (rRNA)
SO name rRNA_5_8S
Organism Leptosphaeria maculans,Didymella rabiei,Phaeosphaeria nodorum,Leptosphaeria microscopica,Leptosphaeria korrae,Ophiosphaerella herpotricha,Ophiosphaerella korrae,Mycosphaerella pinodes,Stagonospora arenaria,Phaeosphaeria avenaria f. sp. triticae,Didymella bryoniae,Ampelomyces sp. ATCC 201059,Phoma sp. HPP38,Didymella applanata,Phoma exigua,Phoma herbarum,Phoma macrostoma,Ampelomyces quercinus,Ampelomyces humuli,Ampelomyces sp. 263,Ampelomyces sp. AQ10,Ampelomyces sp. DSM 2223,Phaeosphaeria eustoma,Phoma glomerata,Pringsheimia euphorbiae,Heritiera littoralis,Ophiosphaerella sp. 00W11,Leptospora rubella,Epicoccum nigrum,Ophiosphaerella agrostis,Phoma medicaginis,Microsphaeropsis amaranthi,Phomopsis sp. IW-75,Phomopsis sp. BG-96,Phomopsis sp. FP3-96,Phomopsis sp. FP1-96,fungal contaminant of Leptosphaeria sp.,Phoma sp. 2,Epicoccum sp. A9,Epicoccum sp. 4/97-60,Epicoccum sp. 6/97-74,Phaeosphaeria halima,Phaeosphaeria spartinae,Phaeosphaeria typharum,Phoma epicoccina,Plenodomus wasabiae,Alternaria longissima,Epicoccum andropogonis,Neophaeosphaeria filamentosa,Phaeosphaeriopsis glauco-punctata,Phaeosphaeriopsis nolinae,Neophaeosphaeria conglomerata,Phaeosphaeriopsis obtusispora,Neophaeosphaeria quadriseptata,Phaeosphaeriopsis agavensis,Phaeosphaeria oryzae,Phoma tracheiphila,Phoma destructiva,Coniothyrium cereale,Phoma betae,Entrophospora sp. JJ60,Entrophospora sp. JJ61,Cladosporium elatum,Alternaria leucanthemi,Phaeosphaeria spartinicola,Pleospora pelagica,Stagonospora sp. SAP144,Pseudocyphellaria maculata,Leptosphaeria sp. MPSC 36,Phaeoseptoria sp. MPSC 65,Phaeosphaeria sp. MPSC 29,Stagonospora foliicola,Leptosphaeria bellynckii,Leptosphaeria conferta,Leptosphaeria congesta,Leptosphaeria dryadis,Leptosphaeria typharum,Leptosphaeria weimeri,Phaeoseptoria musae,Phaeosphaeria berlesei,Phaeosphaeria caricicola,Phaeosphaeria caricinella,Phaeosphaeria caricis,Phaeosphaeria culmorum,Phaeosphaeria dennisiana,Phaeosphaeria fuckelii,Phaeosphaeria herpotrichoides,Phaeosphaeria insignis,Phaeosphaeria juncina,Phaeosphaeria juncophila,Phaeosphaeria lindii,Phaeosphaeria luctuosa,Phaeosphaeria lycopodina,Phaeosphaeria nigrans,Phaeosphaeria oreochloae,Phaeosphaeria padellana,Phaeosphaeria phragmitis,Phaeosphaeria pleurospora,Phaeosphaeria pontiformis,Phaeosphaeria silenes-acaulis,Phaeosphaeria silvatica,Phaeosphaeria triglochinicola,Phaeosphaeria vagans,Phaeosphaeria volkartiana,fungal isolate from Newtonia buchananii seed,Mycosphaerella recutita,fungal endophyte WMS9,fungal endophyte WMS12,Podospora minuta f. tetraspora,Phoma sp. 12-1,Phoma sp. 24-2,Phoma sp. I-3,Phoma sp. I-2,Phoma sp. S-4,Phoma sp. It 2-3,Phoma sp. Kar 59,leaf litter ascomycete strain its056,leaf litter ascomycete strain its059,leaf litter ascomycete strain its160,leaf litter ascomycete strain its245,leaf litter ascomycete strain its393,Neophaeosphaeria barrii,Phaeosphaeriopsis amblyspora,Stagonospora neglecta,Septoria arundinacea,Stagonospora sp. 4/99-1,Stagonospora sp. 4/99-5,Leptosphaerulina trifolii,Didymella lentis,Phoma pinodella,Herpotrichia parasitica,Setomelanomma holmii,Ampelomyces sp. 25-2,Mycosphaerella cannabis,Neoplaconema gloeosporioides,Alternaria helianthi,Didymella ligulicola,Phoma sp. Phom1,Phellinus pectinatus,Leptosphaeria biglobosa,Phoma sp. Po47,Ampelomyces sp. Po61,Ampelomyces sp. Po7,Phoma sp. Po44,Ampelomyces sp. Po59,Phoma sp. Po75,Epicoccum sp. Po12,Phoma sp. Po45,Ampelomyces sp. Po96,Phoma sp. Pr31,Phoma sp. Pr32,Phoma sp. Pr70,Phoma sp. Po48,Phoma sp. Po69,Leptosphaeria biglobosa 'brassicae' group,Leptosphaeria biglobosa 'canadensis' group,Leptosphaeria biglobosa 'australiensis' group,Leptosphaeria biglobosa 'erysimi' group,Leptosphaeria maculans 'brassicae' group,Leptosphaeria maculans 'lepidii' group,Leptosphaeria biglobosa 'thlaspii' group,Leptosphaerulina americana,Phoma sp. 200,Phoma sp. 201,Phoma sp. 203,Didymella cucurbitacearum,Woollsia root associated fungus XI,ascomycete sp. MO1,ascomycete sp. O2,Epacris microphylla root associated fungus 35,Phaeosphaeria sp. CC52/6a-1,Podospora sp. T557/7a-1,Podospora sp. T489/9a-R,Phoma sp. 02BIL5AT,Epicoccum sp. 02TRU72a,Epicoccum sp. 02TRU73b,Epicoccum sp. 02TRU72c,Epicoccum sp. 02MIN3F3,Leptosphaeria sp. GFI 123,Phoma sp. GS8N1c,Phoma sp. GS10N2a,Phoma sp. GS9N1a,Phoma sp. T5N22c(A),Shiraia sp. ML-2004,Ampelomyces sp. Po62,Ampelomyces sp. Po63,Ampelomyces sp. Po64,Phoma sp. Po73,Phoma sp. Po46,Phoma sp. Po76,Phoma sp. Po-fs17,foliar endophyte of Picea glauca sp. H2,Phoma medicaginis var. medicaginis,Phoma sp. MU OMT1,Phoma fimeti,fungal endophyte EMS14,fungal endophyte EMS27,fungal endophyte EMS32,fungal endophyte EMS35,fungal endophyte EMS50,fungal endophyte WMS23,fungal endophyte WMS27,fungal endophyte EMS53,fungal endophyte WMS24,Eudarluca caricis,Pyrenochaeta lycopersici,Ampelomyces sp. MosID8,Ampelomyces sp. MosID9,Phoma eupyrena,ascomycete sp. olrim933,Coniothyrium palmarum,Ampelomyces sp. B2,Ampelomyces sp. B4,Ampelomyces sp. B33,Ampelomyces sp. B34,Ampelomyces sp. B40,Ampelomyces sp. B24,Ampelomyces sp. B55,Ampelomyces sp. U1,Ampelomyces sp. D2,Ampelomyces sp. D4,Phoma sp. C2,fungal sp. TRN47,fungal sp. TRN49,fungal sp. TRN162,fungal sp. TRN215,fungal sp. TRN219,fungal sp. TRN221,fungal sp. TRN222,fungal sp. TRN434,Phaeosphaeria anchiala,Phoma exigua var. heteromorpha,Phoma sp. OMT 5,Phoma sp. WAC 7980,Phoma sp. WAC 7977,Phoma sp. WAC 4741,Phoma sp. WAC 4738,Phoma sp. WAC 4736,Mauginiella scaettae,Pleosporales sp. JA83,Cladosporium sp. MA 4922,ascomycete sp. MA 4926,ascomycete sp. MA 4671,ascomycete sp. MA 4954,ascomycete sp. MA 4907,Phoma sp. MA 4621,fungal sp. V-E10,fungal sp. V-R6
Xref RF00002 Rfam v8.1
Length 154
Sequence
AACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATA
AGTAGTGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCT
TGGTATTCCATGGGGCATGCCTGTTCGAGCGTCA