| 4979 | |
| Probe no | 4979 |
| Probe ID | 4648 |
| TU ID | R08-001750-1AR |
| Microarray | RED |
| Accession | - |
| 5'end Accession | C74612 |
| 3'end Accession | AU172899 |
| Gene name | - |
| Probe name | EF0611 |
| Annotation | ">AF060198_1(AF060198|pid:g3337435) Spinacia oleracea PsbY precursor (psbY) mRNA, nuclear gene encoding chloroplast protein, complete cds; L-AME precursor; low molecular mass protein associated with photosystem II; PsbY precursor protein consists of a polyprotein with a bipartite transit peptide. The polyprotein is further dissected into two bitopic polypeptides, the mature PsbY-A1, a central domain being removed, and the mature PsbY-A2. PsbY-A1 and A2 share high similarity suggesting an internal gene duplication. The polypeptides are associated with photosystem II and arranged in an N-in, C-out orientation. A similar PsbY precursor leading to two bitopic proteins after maturation is also present in Arabidopsis thaliana (GenBank Accession Numbers AF079800 and AJ223306), while the plastid chromosomes of Cyanophora paradoxa, Odontella sinensis, Porphyra purpurea (ycf32), and Cyanidium caldarium (ORF8) as well as the genomic DNA of the cyanobacterium Synechocystis PCC 6803 (sml0007) contain a gene encoding only one bitopic protein. In addition PsbY-A1 protein was completely sequenced (SwissProt Accession Number P80470); putative photosytem II peptide. " |
| 5'probe sequence | CACTCACCATCTCAGAAATTGCATCCAACAGCAGCTGCCATAGTTGCAAGTGAGCTAGAG CTCAGAGAAGAGGAGGAAGAAGAAGGCGTCAATGGCGACCACCATAGCTGCGATGGCCAT GCTTAAGCCGTCCAAGATCGTGGCGCGGTCATCGCCGGCGCCGTCGGGGAGCGGCAGGGT GCCTAGCATCTCGCTCAAGAGCCTGGCCAAGAAGGGCATGTCGGTGTCGTCGTCGTCGGC GGCGGCGGCGCCGTNGNGCGGCGGCGATGGCGGGCGCGTTCTTCTCGGNGCTGGCGTCGA CGGACGCGGCG |
| 3'probe sequence | GTGGGTGCTTTACAACATCCTCCAGCCGGCGCTGAACCAGCTGAACCGCATGCGGTCGGA GCAGGTGCTCGTCGCCGGGCTCGGCCTGGGCGCGGCGGCGGGTGCCGGGCTCGCGTTCCC GCCCAAGGCGTCGGCGGCGCAGGAGGTGGCNAGGCTGGCGGCGGAGGCGGCGGCGGCGGA GGGCGGCGACAACCCCGGCCTGCTGCTGCTGTTCGTGGTGGCGCCGGCGATCGCCTGGGT TCTCTACAACATCCTGCAGCCGGCGTTGAACCAGCTAAACCGCATGCGGTCAGACTGAGA GCTTGAGCTTGAAGATTGCATCCGGTACATGTGTGTACGTGGTGTGTTTTGAGGGTGGTG GAGTGGAGTGGAGTGGTAGTGACGTGGAATGTGGTGTACTTATGCCTTAATTAATCCTGT TCCTAAAAAAAAAAAAAAAA |
| Expression info | Link |