| 1QDM | |
| PDB ID | 1QDM |
| Japanese name | 大麦 |
| English name | Barley |
| Scientific name | Hordeum vulgare l. |
| Protein name | Phytepsin Precursor |
| Gene name | - |
| Source/Organism | Hordeum Vulgare |
| Compound | Molecule: Prophytepsin; Chain: A, B, C; Biological_unit: Monomer |
| Classification | Hydrolase |
| EC number | 3.4.23.40 (Prophytepsin) |
| Authors | J.Kervinen, G.J.Tobin, J.Costa, D.S.Waugh, A.Wlodawer, A.Zdanov |
| Reference | J.Kervinen, G.J.Tobin, J.Costa, D.S.Waugh, A.Wlodawer, A.Zdanov Crystal Structure Of Plant Aspartic Proteinase Prophytepsin: Inactivation And Vacuolar Targeting. Embo J. V. 18 3947 1999 |
| Key word | Aspartic Proteinases, Phytepsin, Saposin-Like Domain, Zymogen Structure, Hydrolase |
| Cross reference | SWS:ASPR_HORVU,P42210 EMBL; X56136; CAA39602.1; -. PIR; S19697; S19697. PDB; 1QDM; X-ray; A/B/C=-. MEROPS; A01.020; -. InterPro; IPR001461; Peptidase_A1. InterPro; IPR009007; Pept_Aspartic. InterPro; IPR001969; Pept_Asp_AS. InterPro; IPR007856; SapB_1. InterPro; IPR008138; SapB_2. InterPro; IPR008140; SapB_sub. InterPro; IPR008373; Saposin. InterPro; IPR008139; SaposinB. InterPro; IPR011001; Saposin_like. Pfam; PF00026; Asp; 1. Pfam; PF05184; SapB_1; 1. Pfam; PF03489; SapB_2; 1. PRINTS; PR00792; PEPSIN. PRINTS; PR01797; SAPOSIN. ProDom; PD001732; SapB_sub; 1. PROSITE; PS00141; ASP_PROTEASE; 2. |
| Experimental method | X-Ray Diffraction, Resolution: 2.30 Angstrom, R-Factor: 0.224, R-Free: Null |
| Sequence characteristics | Length: 508 AA, Molecular weight: 54226 Da |
| Sequence | MGTRGLALALLAAVLLLQTVLPAASEAEGLVRIALKKRPIDRNSRVATGLSGGEEQPLLS GANPLRSEEEGDIVALKNYMNAQYFGEIGVGTPPQKFTVIFDTGSSNLWVPSAKCYFSIA CYLHSRYKAGASSTYKKNGKPAAIQYGTGSIAGYFSEDSVTVGDLVVKDQEFIEATKEPG ITFLVAKFDGILGLGFKEISVGKAVPVWYKMIEQGLVSDPVFSFWLNRHVDEGEGGEIIF GGMDPKHYVGEHTYVPVTQKGYWQFDMGDVLVGGKSTGFCAGGCAAIADSGTSLLAGPTA IITEINEKIGAAGVVSQECKTIVSQYGQQILDLLLAETQPKKICSQVGLCTFDGTRGVSA GIRSVVDDEPVKSNGLRADPMCSACEMAVVWMQNQLAQNKTQDLILDYVNQLCNRLPSPM GESAVDCGSLGSMPDIEFTIGGKKFALKPEEYILKVGEGAAAQCISGFTAMDIPPPRGPL WILGDVFMGPYHTVFDYGKLRIGFAKAA |
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