1VOL | |
PDB ID | 1VOL |
Japanese name | シロイヌナズナ |
English name | Arabidopsis |
Scientific name | Arabidopsis thaliana (L.) Heynh. |
Protein name | Transcription Initiation Factor Iib |
Gene name | Name=Gtf2b; Synonyms=Tf2b, Tfiib; |
Source/Organism | Homo Sapiens |
Compound | Molecule: Transcription Factor Iib; Chain: A; Fragment: Residues 113 - 316; Engineered: Yes; Molecule: Tata-Box-Binding Protein; Chain: B; Engineered: Yes; Molecule: 16 Base-Pair Tata-Containing Oligonucleotide; Chain: C, D; Engineered: Yes |
Classification | Complex(Transcription Factor/Regn/Dna) |
EC number | - |
Authors | D.B.Nikolov, H.Chen, E.D.Halay, A.U.Usheva, K.Hisatake, D.K.Lee, R.G.Roeder, S.K.Burley |
Reference | D.B.Nikolov, H.Chen, E.D.Halay, A.A.Usheva, K.Hisatake, D.K.Lee, R.G.Roeder, S.K.Burley Crystal Structure Of A Tfiib-Tbp-Tata-Element Ternary Complex Nature V. 377 119 1995 |
Key word | Transcription Initiation, Molecular Recognition, Complex, Transcription Factor, Transcription Regulation, Dna |
Cross reference | SWS:TF2B_HUMAN,Q00403 SWS:TF21_ARATH,P28147 PDB:1VOL,1VOL EMBL; X59268; CAA41958.1; -. EMBL; M76766; AAA61149.1; -. EMBL; BC020597; AAH20597.1; -. EMBL; BC021000; AAH21000.1; -. EMBL; S44184; AAB23144.1; -. PIR; S17654; TWHU2B. PDB; 1C9B; X-ray; A/E/I/M/Q=110-316. PDB; 1DL6; NMR; A=2-59. PDB; 1TFB; NMR; @=109-316. PDB; 1VOL; X-ray; A=113-316. TRANSFAC; T00818; -. Genew; HGNC:4648; GTF2B. H-InvDB; HIX0000760; -. Reactome; Q00403; -. MIM; 189963; -. GO; GO:0016251; F:general RNA polymerase II transcription fac...; TAS. GO; GO:0006366; P:transcription from Pol II promoter; TAS. InterPro; IPR006670; Cyclin. InterPro; IPR011028; Cyclin_like. InterPro; IPR000812; TFIIB_euk. Pfam; PF00382; TFIIB; 2. PRINTS; PR00685; TIFACTORIIB. SMART; SM00385; CYCLIN; 2. PROSITE; PS00782; TFIIB; 2. |
Experimental method | X-Ray Diffraction, Resolution: 2.7 Angstrom, R-Factor: 0.215, R-Free: 0.318 |
Sequence characteristics | Length: 316 AA, Molecular weight: 34833 Da |
Sequence | MASTSRLDALPRVTCPNHPDAILVEDYRAGDMICPECGLVVGDRVIDVGSEWRTFSNDKA TKDPSRVGDSQNPLLSDGDLSTMIGKGTGAASFDEFGNSKYQNRRTMSSSDRAMMNAFKE ITTMADRINLPRNIVDRTNNLFKQVYEQKSLKGRANDAIASACLYIACRQEGVPRTFKEI CAVSRISKKEIGRCFKLILKALETSVDLITTGDFMSRFCSNLCLPKQVQMAATHIARKAV ELDLVPGRSPISVAAAAIYMASQASAEKRTQKEIGDIAGVADVTIRQSYRLIYPRAPDLF PTDFKFDTPVDKLPQL |
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