CBRC-BTAU-01-2416
ID CBRC-BTAU-01-2416
Pseudo
Novel -
Chromosome UN
Level A
Family Opsins
Alternativeproducts
Swiss-Prot BLAST top hit OPSD_BOVIN
[BLAST OUTPUT]
Swiss-Prot BLAST top hit (E-value) 0.0
Swiss-Prot BLAST top hit (Identity) 100%
NCBI nr-aa BLAST top hit ref|NP_001014890.1| rhodopsin [Bos taurus] sp|P02699|OPSD_BOVIN Rhodopsin pdb|1JFP|A Chain A, Structure Of Bovine Rhodopsin (Dark Adapted) pdb|1LN6|A Chain A, Structure Of Bovine Rhodopsin (Metarhodopsin Ii) pdb|1GZM|A Chain A, Structure Of Bovine Rhodopsin In A Trigonal Crystal Form pdb|1GZM|B Chain B, Structure Of Bovine Rhodopsin In A Trigonal Crystal Form pdb|1HZX|A Chain A, Crystal Structure Of Bovine Rhodopsin pdb|1HZX|B Chain B, Crystal Structure Of Bovine Rhodopsin pdb|1L9H|A Chain A, Crystal Structure Of Bovine Rhodopsin At 2.6 Angstroms Resolution pdb|1L9H|B Chain B, Crystal Structure Of Bovine Rhodopsin At 2.6 Angstroms Resolution pdb|1U19|A Chain A, Crystal Structure Of Bovine Rhodopsin At 2.2 Angstroms Resolution pdb|1U19|B Chain B, Crystal Structure Of Bovine Rhodopsin At 2.2 Angstroms Resolution pdb|2G87|A Chain A, Crystallographic Model Of Bathorhodopsin pdb|2G87|B Chain B, Crystallographic Model Of Bathorhodopsin pdb|2HPY|A Chain A, Crystallographic Model Of Lumirhodopsin pdb|2HPY|B Chain B, Crystallographic Model Of Lumirhodopsin pdb|2I35|A Chain A, Crystal Structure Of Rhombohedral Crystal Form Of Ground- State Rhodopsin pdb|2I36|A Chain A, Crystal Structure Of Trigonal Crystal Form Of Ground-State Rhodopsin pdb|2I36|B Chain B, Crystal Structure Of Trigonal Crystal Form Of Ground-State Rhodopsin pdb|2I36|C Chain C, Crystal Structure Of Trigonal Crystal Form Of Ground-State Rhodopsin pdb|2I37|A Chain A, Crystal Structure Of A Photoactivated Rhodopsin pdb|2I37|B Chain B, Crystal Structure Of A Photoactivated Rhodopsin pdb|2I37|C Chain C, Crystal Structure Of A Photoactivated Rhodopsin gb|AAA30674.1| rhodopsin dbj|BAB83621.1| rhodopsin [synthetic construct] prf||0901188A rhodopsin prf||0901212A rhodopsin prf||1001148A rhodopsin
[BLAST OUTPUT]
NCBI nr-aa BLAST top hit (E-value) 0.0
NCBI nr-aa BLAST top hit (Identity) 100%
NCBI Unigene BLAST top hit gnl|UG|Bt#S11933067 Bovine opsin mRNA, 3' end, clone LR-8 /cds=p(1,1032) /gb=M21606 /gi=163444 /ug=Bt.12753 /len=2420
[BLAST OUTPUT]
NCBI Unigene BLAST top hit (E-value) 0.0
NCBI Unigene BLAST top hit (Identity) 99%
Expression -
Ligand -
G-protein coupling -
Sequence
MNGTEGPNFYVPFSNKTGVVRSPFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLY
VTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLG
GEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIP
EGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQES
ATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAV
YNPVIYIMMNKQFRNCMVTTLCCGKNPLGDDEASTTVSKTETSQVAPA
Leftend 54163686
Rightend 54168616