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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP911438
Clone id YMU001_000005_A04
Library
Length 588
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000005_A04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
CCTGGAAGGCGGAGGTTGCAGTGAGCTGAGATTACGCCATTGCACTCTGGCCTAGGTGAC
AAGAGCGAAACTCCATCTCAAAAAAAAAAAAAAATTTTAGTCTGCAGGATGCCATATATG
CTGTTGCCTATGCTTGGGACATAGTGGCTATAGACAAAGTTGTGCATGCCTGGCACAATC
TCTGGCCTGCAACTATGTTCAGTGATGATAAACAAGGTAGTGACTTTGAAGGATTGTGTA
TGTCAAGTGAGAAAAAAAATAACGGCTGATCTACTCACACATGCAAAAAATATACCCCCA
ATGTCTGTCTGTCTGTAAGCTGGAAGAAGTGAATATCAAACAATGTTTATCATGGATAAT
GAGGCTCCAGTTGTTCATTCGCTGACCAATGATGAAGTAGCTGAAATGGTTTTGAATCAA
GTTGATCGTGATAATCAGTGACAATGAAGATGATGTTAACACTACAGAGAAAGTGCCTAT
AAATGACATGGTGAAAAGTTGTGATGGGCTTACTGAAGGACTAAAGCAATGTTCATTCAT
AACAGAACAAGAAATAATGTTGGTTTATATAATCAAAGAGGGACTTCT
■■Homology search results ■■ -
sp_hit_id Q68CQ1
Definition sp|Q68CQ1|CA175_HUMAN Uncharacterized protein C1orf175 OS=Homo sapiens
Align length 25
Score (bit) 46.2
E-value 0.0001
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP911438|Adiantum capillus-veneris mRNA, clone:
YMU001_000005_A04.
         (588 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q68CQ1|CA175_HUMAN Uncharacterized protein C1orf175 OS=Homo s...    46   1e-04
sp|Q8WTZ3|YS049_HUMAN Zinc finger protein ENSP00000375192 OS=Hom...    45   3e-04
sp|Q8IV13|CCNJL_HUMAN Cyclin-J-like protein OS=Homo sapiens GN=C...    45   3e-04
sp|Q96DL1|FA55B_HUMAN Protein FAM55B OS=Homo sapiens GN=FAM55B P...    40   0.007
sp|Q9Y2Z2|MTO1_HUMAN Protein MTO1 homolog, mitochondrial OS=Homo...    40   0.009
sp|Q96J02|ITCH_HUMAN E3 ubiquitin-protein ligase Itchy homolog O...    40   0.009
sp|O75564|JERKY_HUMAN Jerky protein homolog OS=Homo sapiens GN=J...    38   0.033
sp|P78312|CD008_HUMAN Uncharacterized protein C4orf8 OS=Homo sap...    38   0.043
sp|Q09FC8|ZN415_HUMAN Zinc finger protein 415 OS=Homo sapiens GN...    37   0.095
sp|Q9Y4A0|JERKL_HUMAN Jerky protein homolog-like OS=Homo sapiens...    37   0.095
sp|Q4W5G0|TIGD2_HUMAN Tigger transposable element-derived protei...    35   0.28 
sp|Q9UHC9|NPCL1_HUMAN Niemann-Pick C1-like protein 1 OS=Homo sap...    35   0.28 
sp|Q60976|JERKY_MOUSE Jerky protein OS=Mus musculus GN=Jrk PE=2 ...    35   0.28 
sp|Q9NXG0|CNTLN_HUMAN Centlein OS=Homo sapiens GN=CNTLN PE=2 SV=4      35   0.28 
sp|Q92918|M4K1_HUMAN Mitogen-activated protein kinase kinase kin...    34   0.47 
sp|Q0VBL1|TIGD2_MOUSE Tigger transposable element-derived protei...    32   1.8  
sp|Q9BUA6|MYLPL_HUMAN Myosin light chain 2, lymphocyte-specific ...    32   1.8  
sp|Q96T75|DSCR8_HUMAN Down syndrome critical region protein 8 OS...    32   1.8  
sp|Q5T7P6|TMM78_HUMAN Transmembrane protein 78 OS=Homo sapiens G...    32   2.3  
sp|Q5TCQ9|MAGI3_HUMAN Membrane-associated guanylate kinase, WW a...    32   2.4  
sp|Q68CZ1|FTM_HUMAN Protein fantom OS=Homo sapiens GN=RPGRIP1L P...    31   4.0  
sp|Q8N2A0|CX062_HUMAN Putative uncharacterized protein CXorf62 O...    31   4.0  
sp|Q8N8F4|YV027_HUMAN Uncharacterized protein FLJ39582 OS=Homo s...    31   4.0  
sp|Q5H9K5|ZMAT1_HUMAN Zinc finger matrin-type protein 1 OS=Homo ...    31   5.2  
sp|Q5U5Z8|CBPC2_HUMAN Cytosolic carboxypeptidase 2 OS=Homo sapie...    31   5.3  
sp|P51957|NEK4_HUMAN Serine/threonine-protein kinase Nek4 OS=Hom...    30   6.8  
sp|Q8NGV9|CSRL1_HUMAN Putative calcium-sensing receptor-like 1 O...    30   6.8  
sp|Q96MD7|CI085_HUMAN Uncharacterized protein C9orf85 OS=Homo sa...    30   8.9  
sp|Q8N9N2|ASCC1_HUMAN Activating signal cointegrator 1 complex s...    30   8.9  

>sp|Q68CQ1|CA175_HUMAN Uncharacterized protein C1orf175 OS=Homo
           sapiens GN=C1orf175 PE=2 SV=2
          Length = 1290

 Score = 46.2 bits (108), Expect = 1e-04
 Identities = 21/25 (84%), Positives = 21/25 (84%)
 Frame = -2

Query: 77  DGVSLLSPRPECNGVISAHCNLRLP 3
           DGVSLL PR ECNG ISAHCNL LP
Sbjct: 411 DGVSLLLPRLECNGAISAHCNLCLP 435


>sp|Q8WTZ3|YS049_HUMAN Zinc finger protein ENSP00000375192 OS=Homo
           sapiens PE=2 SV=1
          Length = 238

 Score = 44.7 bits (104), Expect = 3e-04
 Identities = 20/31 (64%), Positives = 22/31 (70%)
 Frame = -2

Query: 98  KIFFFF*DGVSLLSPRPECNGVISAHCNLRL 6
           K+FFFF      LSP+ ECNG IS HCNLRL
Sbjct: 90  KVFFFFLKWSLTLSPKLECNGAISVHCNLRL 120


>sp|Q8IV13|CCNJL_HUMAN Cyclin-J-like protein OS=Homo sapiens
           GN=CCNJL PE=2 SV=3
          Length = 435

 Score = 44.7 bits (104), Expect = 3e-04
 Identities = 19/25 (76%), Positives = 23/25 (92%)
 Frame = -2

Query: 77  DGVSLLSPRPECNGVISAHCNLRLP 3
           +GVSLLSPR +C+G+ISAHCNL LP
Sbjct: 94  NGVSLLSPRLKCSGMISAHCNLHLP 118


>sp|Q96DL1|FA55B_HUMAN Protein FAM55B OS=Homo sapiens GN=FAM55B PE=2
           SV=1
          Length = 365

 Score = 40.4 bits (93), Expect = 0.007
 Identities = 19/30 (63%), Positives = 24/30 (80%)
 Frame = -2

Query: 92  FFFF*DGVSLLSPRPECNGVISAHCNLRLP 3
           +F F D ++L SPR EC+G+ISAHCNL LP
Sbjct: 313 YFIFRDSLTL-SPRLECSGMISAHCNLCLP 341


>sp|Q9Y2Z2|MTO1_HUMAN Protein MTO1 homolog, mitochondrial OS=Homo
           sapiens GN=MTO1 PE=1 SV=2
          Length = 717

 Score = 40.0 bits (92), Expect = 0.009
 Identities = 19/25 (76%), Positives = 19/25 (76%)
 Frame = -2

Query: 77  DGVSLLSPRPECNGVISAHCNLRLP 3
           DGV LL PR ECNG ISAH NL LP
Sbjct: 377 DGVLLLLPRMECNGAISAHHNLPLP 401


>sp|Q96J02|ITCH_HUMAN E3 ubiquitin-protein ligase Itchy homolog
           OS=Homo sapiens GN=ITCH PE=1 SV=2
          Length = 903

 Score = 40.0 bits (92), Expect = 0.009
 Identities = 18/25 (72%), Positives = 19/25 (76%)
 Frame = -2

Query: 77  DGVSLLSPRPECNGVISAHCNLRLP 3
           +GVSL  PR ECN  ISAHCNL LP
Sbjct: 159 NGVSLCLPRLECNSAISAHCNLCLP 183


>sp|O75564|JERKY_HUMAN Jerky protein homolog OS=Homo sapiens GN=JRK
           PE=2 SV=2
          Length = 520

 Score = 38.1 bits (87), Expect = 0.033
 Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
 Frame = +3

Query: 96  FSLQDAIYAVAYAWDIVAIDKVVHAWHNLWPATMFSDDKQG-SDFEGLCMSSEKKN 260
           +++ DAI++VA AW+ V       AW  LWP+  F++      + E  C   +  N
Sbjct: 309 YNMNDAIFSVACAWNAVPSHVFRRAWRKLWPSVAFAEGSSSEEELEAECFPVKPHN 364


>sp|P78312|CD008_HUMAN Uncharacterized protein C4orf8 OS=Homo sapiens
            GN=C4orf8 PE=1 SV=2
          Length = 1265

 Score = 37.7 bits (86), Expect = 0.043
 Identities = 18/25 (72%), Positives = 18/25 (72%)
 Frame = -2

Query: 77   DGVSLLSPRPECNGVISAHCNLRLP 3
            DGVSLL P    NG I AHCNLRLP
Sbjct: 1167 DGVSLLLPSLGYNGAILAHCNLRLP 1191


>sp|Q09FC8|ZN415_HUMAN Zinc finger protein 415 OS=Homo sapiens
           GN=ZNF415 PE=2 SV=2
          Length = 603

 Score = 36.6 bits (83), Expect = 0.095
 Identities = 15/17 (88%), Positives = 15/17 (88%)
 Frame = -2

Query: 53  RPECNGVISAHCNLRLP 3
           R ECNG ISAHCNLRLP
Sbjct: 61  RLECNGAISAHCNLRLP 77


>sp|Q9Y4A0|JERKL_HUMAN Jerky protein homolog-like OS=Homo sapiens
           GN=JRKL PE=2 SV=1
          Length = 442

 Score = 36.6 bits (83), Expect = 0.095
 Identities = 17/57 (29%), Positives = 30/57 (52%)
 Frame = +3

Query: 60  QERNSISKKKKNFSLQDAIYAVAYAWDIVAIDKVVHAWHNLWPATMFSDDKQGSDFE 230
           +E N +    K  +L DA+Y +A AW++V    +  AW  + P     ++K+  DF+
Sbjct: 266 EEGNDLKSFWKKLTLLDALYEIAMAWNLVKPVTISRAWKKILPMV---EEKESLDFD 319
tr_hit_id Q8TB74
Definition tr|Q8TB74|Q8TB74_HUMAN Similar to Cytochrome c, somatic OS=Homo sapiens
Align length 50
Score (bit) 77.8
E-value 4.0e-27
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP911438|Adiantum capillus-veneris mRNA, clone:
YMU001_000005_A04.
         (588 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q8TB74|Q8TB74_HUMAN Similar to Cytochrome c, somatic OS=Homo ...    78   4e-27
tr|Q8N1K7|Q8N1K7_HUMAN cDNA FLJ40558 fis, clone THYMU2002756 OS=...    53   1e-05
tr|A8MWW9|A8MWW9_HUMAN Putative uncharacterized protein ENSP0000...    53   1e-05
tr|Q9NX85|Q9NX85_HUMAN CDNA FLJ20378 fis, clone KAIA0536 OS=Homo...    51   6e-05
tr|Q9H387|Q9H387_HUMAN PRO2550 OS=Homo sapiens PE=4 SV=1               50   7e-05
tr|Q9H728|Q9H728_HUMAN CDNA: FLJ21463 fis, clone COL04765 (HCG17...    49   2e-04
tr|Q86U25|Q86U25_HUMAN Full-length cDNA clone CS0DA007YG23 of Ne...    47   8e-04
tr|Q6ZTD0|Q6ZTD0_HUMAN cDNA FLJ44781 fis, clone BRACE3036283, mo...    47   8e-04
tr|Q86TV4|Q86TV4_HUMAN Full-length cDNA clone CS0DI085YI08 of Pl...    46   0.001
tr|B4DEK6|B4DEK6_HUMAN cDNA FLJ50002, highly similar to Homo sap...    45   0.002
tr|B5MDN2|B5MDN2_HUMAN Putative uncharacterized protein CCNJL OS...    45   0.004
tr|A8MVK9|A8MVK9_HUMAN Putative uncharacterized protein ENSP0000...    44   0.007
tr|Q71M26|Q71M26_HUMAN Putative uncharacterized protein FP6778 O...    44   0.009
tr|Q15662|Q15662_HUMAN Transformation-related protein (Fragment)...    43   0.011
tr|A8MWJ0|A8MWJ0_HUMAN Putative uncharacterized protein C14orf45...    43   0.012
tr|A8MY72|A8MY72_HUMAN Putative uncharacterized protein ENSP0000...    43   0.015
tr|B7WPF2|B7WPF2_HUMAN Putative uncharacterized protein ENSP0000...    42   0.020
tr|Q9H700|Q9H700_HUMAN Erythroid differentiation-related factor ...    42   0.020
tr|A5D8N3|A5D8N3_XENLA Putative uncharacterized protein (Fragmen...    42   0.033
tr|Q6ZNU7|Q6ZNU7_HUMAN CDNA FLJ27113 fis, clone SPL05845 OS=Homo...    42   0.034
tr|Q8HXJ4|Q8HXJ4_MACFA Putative uncharacterized protein OS=Macac...    41   0.044
tr|Q96MP3|Q96MP3_HUMAN cDNA FLJ32095 fis, clone OCBBF2000998 OS=...    41   0.044
tr|Q6ZPA0|Q6ZPA0_HUMAN CDNA FLJ26177 fis, clone ADG04148 OS=Homo...    41   0.044
tr|Q6ZPB2|Q6ZPB2_HUMAN CDNA FLJ26134 fis, clone TMS03713 OS=Homo...    41   0.057
tr|B4DXN8|B4DXN8_HUMAN cDNA FLJ61455, highly similar to ribosoma...    41   0.057
tr|A8MVY3|A8MVY3_HUMAN Putative uncharacterized protein ENSP0000...    41   0.058
tr|A2VED1|A2VED1_HUMAN Augmented in rheumatoid arthritis 2 OS=Ho...    41   0.058
tr|Q3V2Y6|Q3V2Y6_MOUSE Putative uncharacterized protein OS=Mus m...    40   0.074
tr|B2RRL2|B2RRL2_MOUSE Jrkl protein (MCG52084) OS=Mus musculus G...    40   0.074
tr|A8MVC3|A8MVC3_HUMAN Putative uncharacterized protein ENSP0000...    40   0.074

>tr|Q8TB74|Q8TB74_HUMAN Similar to Cytochrome c, somatic OS=Homo
           sapiens GN=MGC12965 PE=2 SV=1
          Length = 298

 Score = 77.8 bits (190), Expect(3) = 4e-27
 Identities = 38/50 (76%), Positives = 43/50 (86%)
 Frame = +2

Query: 437 SDNEDDVNTTEKVPINDMVKSCDGLTEGLKQCSFITEQEIMLVYIIKEGL 586
           +DNEDDVNT EKVPI+DMVK CDGL +GL+Q +FITEQEIM VY IKE L
Sbjct: 200 NDNEDDVNTAEKVPIDDMVKMCDGLIKGLEQHAFITEQEIMSVYKIKERL 249



 Score = 58.9 bits (141), Expect(3) = 4e-27
 Identities = 32/61 (52%), Positives = 42/61 (68%)
 Frame = +1

Query: 253 KKITADLLTHAKNIPPMSVCL*AGRSEYQTMFIMDNEAPVVHSLTNDEVAEMVLNQVDRD 432
           KKI +DLLT+ KNI P +V       + + +F  +NEAPVVHSL+N EV +MVLNQ D D
Sbjct: 140 KKIMSDLLTYTKNIHPETVSK-LEEEDIKDVFNSNNEAPVVHSLSNGEVTKMVLNQDDHD 198

Query: 433 N 435
           +
Sbjct: 199 D 199



 Score = 28.9 bits (63), Expect(3) = 4e-27
 Identities = 12/19 (63%), Positives = 15/19 (78%)
 Frame = +3

Query: 201 SDDKQGSDFEGLCMSSEKK 257
           +DD+Q  +FEG  MSSEKK
Sbjct: 123 NDDEQDGNFEGFSMSSEKK 141


>tr|Q8N1K7|Q8N1K7_HUMAN cDNA FLJ40558 fis, clone THYMU2002756
           OS=Homo sapiens PE=2 SV=1
          Length = 179

 Score = 53.1 bits (126), Expect = 1e-05
 Identities = 29/58 (50%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
 Frame = -2

Query: 173 PGMHNFVYS-HYVPSIGNSIYGILQTKIFFFF*DGVSLLSPRPECNGVISAHCNLRLP 3
           P  H++  S  Y+  +G  ++ IL   I FFF D V LL PR ECNG I A CNLRLP
Sbjct: 47  PWEHSYRLSVPYLKCLGLEVFLILDFGILFFFGDSVLLLLPRLECNGAILARCNLRLP 104


>tr|A8MWW9|A8MWW9_HUMAN Putative uncharacterized protein
           ENSP00000381715 OS=Homo sapiens PE=4 SV=1
          Length = 161

 Score = 52.8 bits (125), Expect = 1e-05
 Identities = 24/28 (85%), Positives = 24/28 (85%)
 Frame = -1

Query: 90  FFFLRWSFALVT*ARVQWRNLSSLQPPP 7
           FFFLRWSFALV  A VQWRNLSS QPPP
Sbjct: 65  FFFLRWSFALVAQAGVQWRNLSSSQPPP 92


>tr|Q9NX85|Q9NX85_HUMAN CDNA FLJ20378 fis, clone KAIA0536 OS=Homo
           sapiens PE=2 SV=1
          Length = 152

 Score = 50.8 bits (120), Expect = 6e-05
 Identities = 24/29 (82%), Positives = 24/29 (82%)
 Frame = -1

Query: 93  FFFFLRWSFALVT*ARVQWRNLSSLQPPP 7
           FFFFLR SFALV  A VQWRNL SLQPPP
Sbjct: 23  FFFFLRQSFALVAQAGVQWRNLGSLQPPP 51


>tr|Q9H387|Q9H387_HUMAN PRO2550 OS=Homo sapiens PE=4 SV=1
          Length = 118

 Score = 50.4 bits (119), Expect = 7e-05
 Identities = 23/31 (74%), Positives = 24/31 (77%)
 Frame = -1

Query: 93 FFFFLRWSFALVT*ARVQWRNLSSLQPPPSR 1
          FF FLRWSF LV  A VQWR+LSS QPPP R
Sbjct: 6  FFLFLRWSFTLVAQAGVQWRDLSSPQPPPPR 36


>tr|Q9H728|Q9H728_HUMAN CDNA: FLJ21463 fis, clone COL04765
           (HCG1744006) OS=Homo sapiens GN=hCG_1744006 PE=2 SV=1
          Length = 171

 Score = 49.3 bits (116), Expect = 2e-04
 Identities = 28/48 (58%), Positives = 32/48 (66%), Gaps = 6/48 (12%)
 Frame = -2

Query: 128 GNSIY---GILQTKI---FFFF*DGVSLLSPRPECNGVISAHCNLRLP 3
           GN ++    I+QTKI   FFFF      LSPR ECNG ISAHC+LRLP
Sbjct: 35  GNFLFLNLAIIQTKISSSFFFFLRQSLTLSPRLECNGAISAHCHLRLP 82


>tr|Q86U25|Q86U25_HUMAN Full-length cDNA clone CS0DA007YG23 of
           Neuroblastoma of Homo sapiens (human) (Tetratricopeptide
           repeat domain 8, isoform CRA_d) OS=Homo sapiens GN=TTC8
           PE=2 SV=1
          Length = 211

 Score = 47.0 bits (110), Expect = 8e-04
 Identities = 24/36 (66%), Positives = 28/36 (77%)
 Frame = +1

Query: 1   PGRRRLQ*AEITPLHSGLGDKSETPSQKKKKILVCR 108
           P +RRLQ AEITPL+S LG+KS+TPSQK   IL  R
Sbjct: 64  PRKRRLQQAEITPLYSSLGNKSKTPSQKAAWILKAR 99


>tr|Q6ZTD0|Q6ZTD0_HUMAN cDNA FLJ44781 fis, clone BRACE3036283,
           moderately similar to Cyclin G-associated kinase (EC
           2.7.1.-) OS=Homo sapiens PE=2 SV=1
          Length = 195

 Score = 47.0 bits (110), Expect = 8e-04
 Identities = 23/29 (79%), Positives = 25/29 (86%)
 Frame = +1

Query: 4   GRRRLQ*AEITPLHSGLGDKSETPSQKKK 90
           GR+RLQ AEITPLHSGLGD+ ET SQ KK
Sbjct: 19  GRQRLQRAEITPLHSGLGDRVETLSQTKK 47


>tr|Q86TV4|Q86TV4_HUMAN Full-length cDNA clone CS0DI085YI08 of
           Placenta of Homo sapiens (human) (Fragment) OS=Homo
           sapiens PE=2 SV=1
          Length = 545

 Score = 46.2 bits (108), Expect = 0.001
 Identities = 21/25 (84%), Positives = 21/25 (84%)
 Frame = -2

Query: 77  DGVSLLSPRPECNGVISAHCNLRLP 3
           DGVSL SPR ECNG ISAHCNL LP
Sbjct: 98  DGVSLSSPRLECNGAISAHCNLCLP 122


>tr|B4DEK6|B4DEK6_HUMAN cDNA FLJ50002, highly similar to Homo
           sapiens peptidylprolyl isomerase (cyclophilin)-like 6
           (PPIL6), mRNA OS=Homo sapiens PE=2 SV=1
          Length = 263

 Score = 45.4 bits (106), Expect = 0.002
 Identities = 27/42 (64%), Positives = 27/42 (64%)
 Frame = -2

Query: 128 GNSIYGILQTKIFFFF*DGVSLLSPRPECNGVISAHCNLRLP 3
           G SIYG         F DGVSL SP  ECNGVISAHCNL LP
Sbjct: 220 GESIYGPT-------FEDGVSL-SPMLECNGVISAHCNLHLP 253