BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP911449|Adiantum capillus-veneris mRNA, clone:
YMU001_000005_B03.
         (473 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P0C6T6|R1A_BCHK9 Replicase polyprotein 1a OS=Bat coronavirus ...    31   3.2  
sp|P0C6W5|R1AB_BCHK9 Replicase polyprotein 1ab OS=Bat coronaviru...    31   3.2  
sp|Q9Z9G5|PMP1_CHLPN Probable outer membrane protein pmp1 OS=Chl...    30   4.2  
sp|Q54IR8|STRUM_DICDI Strumpellin homolog OS=Dictyostelium disco...    30   7.1  
sp|Q9HDW7|ATC2_SCHPO Calcium-transporting ATPase 2 OS=Schizosacc...    30   7.1  

>sp|P0C6T6|R1A_BCHK9 Replicase polyprotein 1a OS=Bat coronavirus HKU9
            GN=1a PE=3 SV=1
          Length = 4248

 Score = 30.8 bits (68), Expect = 3.2
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +1

Query: 238  LVMWKSVLVHCFFILASANSVRWPVPWCITKNQSCDLHDVK 360
            +V W+ VL+H F +L   N  +W  PW I +    ++ D K
Sbjct: 2614 IVSWRRVLIHVFMLLVVLNP-QWFTPWYIMRPIEYNVVDFK 2653


>sp|P0C6W5|R1AB_BCHK9 Replicase polyprotein 1ab OS=Bat coronavirus
            HKU9 GN=rep PE=3 SV=1
          Length = 6930

 Score = 30.8 bits (68), Expect = 3.2
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +1

Query: 238  LVMWKSVLVHCFFILASANSVRWPVPWCITKNQSCDLHDVK 360
            +V W+ VL+H F +L   N  +W  PW I +    ++ D K
Sbjct: 2614 IVSWRRVLIHVFMLLVVLNP-QWFTPWYIMRPIEYNVVDFK 2653


>sp|Q9Z9G5|PMP1_CHLPN Probable outer membrane protein pmp1
           OS=Chlamydia pneumoniae GN=pmp1 PE=2 SV=1
          Length = 922

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
 Frame = +3

Query: 126 HILKSSGELNTKSKNQY---YYKPTKSKDPNLTICGLNFDPRNVEICSSSLF 272
           H+L+++  L  +++N Y   +Y P  S+    T   +N DP+N E   + LF
Sbjct: 359 HLLQNAKFLKLQARNGYSIEFYDPITSEADGSTQLNINGDPKNKEYTGTILF 410


>sp|Q54IR8|STRUM_DICDI Strumpellin homolog OS=Dictyostelium
           discoideum GN=DDB_G0288569 PE=3 SV=1
          Length = 1164

 Score = 29.6 bits (65), Expect = 7.1
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +2

Query: 383 FREIVNPYCRKSCRSFSRSNIFDPQSSFSS 472
           F  IVN Y  + C SF +  ++D QS + S
Sbjct: 772 FSRIVNFYVEQECNSFLKKKVYDWQSQYQS 801


>sp|Q9HDW7|ATC2_SCHPO Calcium-transporting ATPase 2
            OS=Schizosaccharomyces pombe GN=pmc1 PE=2 SV=1
          Length = 1292

 Score = 29.6 bits (65), Expect = 7.1
 Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
 Frame = +1

Query: 37   LALK*VLNFKQKRIRHHPRNKTSHNNFKRNTFLSPQV-S*IQNRKINTTTNL 189
            LA+  VL+F    I H+P N    N    NTF+  Q+ + I NR+++   N+
Sbjct: 1026 LAVTLVLHFAGNSIFHYPSNTADMNTIVFNTFVWLQLFNEINNRRLDNKLNI 1077

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP911449|Adiantum capillus-veneris mRNA, clone:
YMU001_000005_B03.
         (473 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A5K1L8|A5K1L8_PLAVI Putative uncharacterized protein OS=Plasm...    33   9.3  

>tr|A5K1L8|A5K1L8_PLAVI Putative uncharacterized protein
           OS=Plasmodium vivax GN=PVX_113265 PE=4 SV=1
          Length = 1376

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
 Frame = +3

Query: 141 SGELNTK--SKNQYYYKPTKSKDPNLTICGLNFD 236
           +  +NT   +KN  YY  T S + N T CGLNFD
Sbjct: 275 TANMNTSFMNKNNVYYDETLSYNSNTTECGLNFD 308