BP911451
Clone id YMU001_000005_B05
Library
Length 512
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000005_B05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
TGACAATTTAAGCAGAAGGCTGGTTTACAGAGCATTGTTTGAAGCGGCAGCCCTTATTGG
GGCAAGTGTACTACAAGTTTATCTTCTCCACCGACTATTCAATAAGAAGCTCAACCAGTC
AAGGGTTTAGTGCTGTGTCTTTAGCAAGGGTTCATTGTCCCTTCAGGAAGCAGAGCTCCT
CTGTAGTAACTAACACATTTGGCTCGCAGCAAGGGGCCCGAGTCCGTCTCTGTAGGTGGA
GGACATGGGAGAGTGAGGGGTCATATTGAAGAGTTTTACTTTTATGGGTTTACTTTCCCA
GATCTTAATTTGGATACAGTAAGCGGGGGGCGCCCATTAACCTAATGGATTGCTCTACCA
TGTTAACAAAGTGAGACATCACAGGTTTTGAAGCTCTCTGTGGTACCTATTTTGTATCAA
TGTAATTATTGTAGGTGTATGGACAGTATGGTGTATTGTGCATCCAGTGGGATTGTTGCC
TTGACATAATTTAAGGGGATTTAATTCAGAAA
■■Homology search results ■■ -
sp_hit_id Q769F9
Definition sp|Q769F9|TMEDA_DICDI Transmembrane emp24 domain-containing protein A OS=Dictyostelium discoideum
Align length 36
Score (bit) 30.4
E-value 5.0
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP911451|Adiantum capillus-veneris mRNA, clone:
YMU001_000005_B05.
(512 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q769F9|TMEDA_DICDI Transmembrane emp24 domain-containing prot... 30 5.0
sp|O17528|SEL9_CAEEL Suppressor/enhancer of lin-12 protein 9 OS=... 30 6.5
sp|A7SXK3|TMED_NEMVE Transmembrane emp24 domain-containing prote... 30 8.5

>sp|Q769F9|TMEDA_DICDI Transmembrane emp24 domain-containing protein
A OS=Dictyostelium discoideum GN=empA PE=3 SV=1
Length = 205

Score = 30.4 bits (67), Expect = 5.0
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = +2

Query: 2 DNLSRRLVYRALFEAAALIGASVLQVYLLHRLFNKK 109
++ + R+++ ++FEA LI S+ Q+Y L R F K
Sbjct: 167 ESTNSRVLWWSVFEAFVLIALSIWQIYYLRRFFEVK 202


>sp|O17528|SEL9_CAEEL Suppressor/enhancer of lin-12 protein 9
OS=Caenorhabditis elegans GN=sel-9 PE=1 SV=1
Length = 203

Score = 30.0 bits (66), Expect = 6.5
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +2

Query: 2 DNLSRRLVYRALFEAAALIGASVLQVYLLHRLF 100
+N + R+V A FEA L+G +V Q++ L R F
Sbjct: 165 ENTNSRVVMWAAFEAFVLVGMTVGQIFYLKRFF 197


>sp|A7SXK3|TMED_NEMVE Transmembrane emp24 domain-containing protein
OS=Nematostella vectensis GN=v1g194562 PE=3 SV=1
Length = 203

Score = 29.6 bits (65), Expect = 8.5
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +2

Query: 2 DNLSRRLVYRALFEAAALIGASVLQVYLLHRLF 100
DN + R+V+ + FE+ L+ ++ QVY L R F
Sbjct: 165 DNTNSRVVWWSFFESLVLVAMTLGQVYYLKRFF 197


tr_hit_id Q0J0I4
Definition tr|Q0J0I4|Q0J0I4_ORYSJ Os09g0507600 protein OS=Oryza sativa subsp. japonica
Align length 42
Score (bit) 60.8
E-value 4.0e-08
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP911451|Adiantum capillus-veneris mRNA, clone:
YMU001_000005_B05.
(512 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q0J0I4|Q0J0I4_ORYSJ Os09g0507600 protein OS=Oryza sativa subs... 61 4e-08
tr|A5AV45|A5AV45_VITVI Putative uncharacterized protein OS=Vitis... 60 6e-08
tr|B6TE63|B6TE63_MAIZE Transmembrane emp24 domain-containing pro... 60 8e-08
tr|B6SUS5|B6SUS5_MAIZE Transmembrane emp24 domain-containing pro... 60 8e-08
tr|A0MAU7|A0MAU7_WHEAT Coated vesicle membrane protein-like OS=T... 59 1e-07
tr|A7Q9A0|A7Q9A0_VITVI Chromosome chr19 scaffold_66, whole genom... 59 1e-07
tr|B4FE73|B4FE73_MAIZE Putative uncharacterized protein OS=Zea m... 59 2e-07
tr|A2Z2X8|A2Z2X8_ORYSI Putative uncharacterized protein OS=Oryza... 58 2e-07
tr|Q9S7M9|Q9S7M9_ARATH Putative coated vesicle membrane protein ... 58 3e-07
tr|Q8L987|Q8L987_ARATH Putative coated vesicle membrane protein ... 58 3e-07
tr|Q6YZD2|Q6YZD2_ORYSJ Os08g0532900 protein OS=Oryza sativa subs... 57 4e-07
tr|A2YXG3|A2YXG3_ORYSI Putative uncharacterized protein OS=Oryza... 57 4e-07
tr|A9P981|A9P981_POPTR Putative uncharacterized protein OS=Popul... 57 7e-07
tr|A9SKH6|A9SKH6_PHYPA Predicted protein OS=Physcomitrella paten... 56 9e-07
tr|A7Q2Y1|A7Q2Y1_VITVI Chromosome chr12 scaffold_47, whole genom... 55 2e-06
tr|A9TN56|A9TN56_PHYPA Predicted protein OS=Physcomitrella paten... 54 6e-06
tr|A9SXC5|A9SXC5_PHYPA Predicted protein OS=Physcomitrella paten... 37 0.43
tr|A9T3W4|A9T3W4_PHYPA Predicted protein OS=Physcomitrella paten... 36 1.3
tr|A9UQI0|A9UQI0_MONBE Predicted protein OS=Monosiga brevicollis... 36 1.3
tr|A9NNL1|A9NNL1_PICSI Putative uncharacterized protein OS=Picea... 35 2.1
tr|Q84MP2|Q84MP2_ORYSJ Os03g0744800 protein OS=Oryza sativa subs... 34 3.7
tr|Q0DJ01|Q0DJ01_ORYSJ Os05g0345700 protein OS=Oryza sativa subs... 34 3.7
tr|A3AML5|A3AML5_ORYSJ Putative uncharacterized protein OS=Oryza... 34 3.7
tr|A2Y3F8|A2Y3F8_ORYSI Putative uncharacterized protein OS=Oryza... 34 3.7
tr|A2XLX1|A2XLX1_ORYSI Putative uncharacterized protein OS=Oryza... 34 3.7
tr|A9RFU0|A9RFU0_PHYPA Predicted protein OS=Physcomitrella paten... 33 6.2

>tr|Q0J0I4|Q0J0I4_ORYSJ Os09g0507600 protein OS=Oryza sativa subsp.
japonica GN=Os09g0507600 PE=3 SV=1
Length = 211

Score = 60.8 bits (146), Expect = 4e-08
Identities = 29/42 (69%), Positives = 36/42 (85%)
Frame = +2

Query: 2 DNLSRRLVYRALFEAAALIGASVLQVYLLHRLFNKKLNQSRV 127
+N+SRR V++A FE+AALI ASV+QVYLLHRLF +KL SRV
Sbjct: 170 ENMSRRAVHKAFFESAALIAASVVQVYLLHRLFERKLGTSRV 211


>tr|A5AV45|A5AV45_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_036211 PE=4 SV=1
Length = 1181

Score = 60.1 bits (144), Expect = 6e-08
Identities = 29/42 (69%), Positives = 35/42 (83%)
Frame = +2

Query: 2 DNLSRRLVYRALFEAAALIGASVLQVYLLHRLFNKKLNQSRV 127
D +SRR VY+A +E+AALIGAS+LQVYLL RLF +KL SRV
Sbjct: 1140 DAMSRRAVYKAFYESAALIGASILQVYLLRRLFERKLGTSRV 1181


>tr|B6TE63|B6TE63_MAIZE Transmembrane emp24 domain-containing
protein 3 OS=Zea mays PE=2 SV=1
Length = 213

Score = 59.7 bits (143), Expect = 8e-08
Identities = 29/42 (69%), Positives = 36/42 (85%)
Frame = +2

Query: 2 DNLSRRLVYRALFEAAALIGASVLQVYLLHRLFNKKLNQSRV 127
+N+SRR V++ALFE+AALI ASV+QVYLL RLF +KL SRV
Sbjct: 172 ENMSRRAVHKALFESAALIAASVIQVYLLRRLFERKLGTSRV 213


>tr|B6SUS5|B6SUS5_MAIZE Transmembrane emp24 domain-containing
protein 3 OS=Zea mays PE=2 SV=1
Length = 213

Score = 59.7 bits (143), Expect = 8e-08
Identities = 29/42 (69%), Positives = 36/42 (85%)
Frame = +2

Query: 2 DNLSRRLVYRALFEAAALIGASVLQVYLLHRLFNKKLNQSRV 127
+N+SRR V++ALFE+AALI ASV+QVYLL RLF +KL SRV
Sbjct: 172 ENMSRRAVHKALFESAALIAASVIQVYLLRRLFERKLGTSRV 213


>tr|A0MAU7|A0MAU7_WHEAT Coated vesicle membrane protein-like
OS=Triticum aestivum PE=2 SV=1
Length = 212

Score = 59.3 bits (142), Expect = 1e-07
Identities = 28/42 (66%), Positives = 36/42 (85%)
Frame = +2

Query: 2 DNLSRRLVYRALFEAAALIGASVLQVYLLHRLFNKKLNQSRV 127
+N+SRR +++ALFE+AALI ASV+QVYLL RLF +KL SRV
Sbjct: 171 ENMSRRAIHKALFESAALIAASVIQVYLLRRLFERKLGTSRV 212


>tr|A7Q9A0|A7Q9A0_VITVI Chromosome chr19 scaffold_66, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00033393001
PE=3 SV=1
Length = 211

Score = 58.9 bits (141), Expect = 1e-07
Identities = 28/42 (66%), Positives = 35/42 (83%)
Frame = +2

Query: 2 DNLSRRLVYRALFEAAALIGASVLQVYLLHRLFNKKLNQSRV 127
D ++RR VY+A +E+AALIGAS+LQVYLL RLF +KL SRV
Sbjct: 170 DAMNRRAVYKAFYESAALIGASILQVYLLRRLFERKLGTSRV 211


>tr|B4FE73|B4FE73_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 213

Score = 58.5 bits (140), Expect = 2e-07
Identities = 29/42 (69%), Positives = 36/42 (85%)
Frame = +2

Query: 2 DNLSRRLVYRALFEAAALIGASVLQVYLLHRLFNKKLNQSRV 127
+N+SRR V++ALFE+AALI ASV+QVYLL RLF +KL SRV
Sbjct: 172 ENMSRRAVHKALFESAALIVASVIQVYLLRRLFERKLGTSRV 213


>tr|A2Z2X8|A2Z2X8_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_31972 PE=3 SV=1
Length = 211

Score = 58.2 bits (139), Expect = 2e-07
Identities = 28/42 (66%), Positives = 35/42 (83%)
Frame = +2

Query: 2 DNLSRRLVYRALFEAAALIGASVLQVYLLHRLFNKKLNQSRV 127
+N+SRR V++A FE+AALI ASV+QVYLLH LF +KL SRV
Sbjct: 170 ENMSRRAVHKAFFESAALIAASVVQVYLLHLLFERKLGTSRV 211


>tr|Q9S7M9|Q9S7M9_ARATH Putative coated vesicle membrane protein
OS=Arabidopsis thaliana GN=MLP3.13 PE=2 SV=1
Length = 208

Score = 57.8 bits (138), Expect = 3e-07
Identities = 28/42 (66%), Positives = 35/42 (83%)
Frame = +2

Query: 2 DNLSRRLVYRALFEAAALIGASVLQVYLLHRLFNKKLNQSRV 127
+N+S+R V++ALFE+ ALIGAS LQVYLL RLF +KL SRV
Sbjct: 167 ENMSKRAVHKALFESFALIGASFLQVYLLRRLFERKLGMSRV 208


>tr|Q8L987|Q8L987_ARATH Putative coated vesicle membrane protein
OS=Arabidopsis thaliana PE=2 SV=1
Length = 208

Score = 57.8 bits (138), Expect = 3e-07
Identities = 28/42 (66%), Positives = 35/42 (83%)
Frame = +2

Query: 2 DNLSRRLVYRALFEAAALIGASVLQVYLLHRLFNKKLNQSRV 127
+N+S+R V++ALFE+ ALIGAS LQVYLL RLF +KL SRV
Sbjct: 167 ENMSKRAVHKALFESFALIGASFLQVYLLRRLFERKLGMSRV 208