BP911453 [AcEST]

BP911453
Clone id	YMU001_000005_B07
Library	YMU01
Length	541
Definition	Adiantum capillus-veneris mRNA. clone: YMU001_000005_B07.
Accession	BP911453
Tissue type	prothallium
Developmental stage	-
Contig ID	CL2727Contig1
Sequence	GAAGGAATCAAGATCTCTGCCACAGAGCATCCTACTTCAGTCGGTTTGGAGACATTATAT CAAGCTTACGAGCAAACTGAAAAGTCTTAACTAGGGAAATAGATAAAGCAATTCAAGATA GGGCAGTGTATGCCAGCGACACAGATTTCACACAAAAGGGATATAGTTTCACATGAACTT GACTAACTAATTCCATCAAGGGGCTTCTTCGCAACTGACATGTAGGCGTGAAGTGGTAAC TCAGCTCTTGCCAAAATGAGCTTGTAGTGCAGGCAATTCCCCTTCAAGTGATCACAGCTT ACAGCCTTCTAGGTCTTTGCTGGTTGTATGATGACAATACTTGGAGCATGTACATTTAAT GTAAGGTCTGTATGTGGAGTCTTTGAGAAGTGCAAGCTAATGAAGGACTACAAGATATGC TCCATCCATTTTGGGGCATGTGATGCAATGTCAGGATAGGCAATGCACCAGTTTTGAGGG GTTTCTTTACAAATATTTGTGAAGCTCTTCATGTATAAGGTATAAAGTTTACGAGTAAAA A
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	Q39Q58
Definition	sp\|Q39Q58\|PDXA_GEOMG 4-hydroxythreonine-4-phosphate dehydrogenase OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210)
Align length	28
Score (bit)	29.6
E-value	9.9
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP911453\|Adiantum capillus-veneris mRNA, clone: YMU001_000005_B07. (541 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp\|Q39Q58\|PDXA_GEOMG 4-hydroxythreonine-4-phosphate dehydrogenas... 30 9.9 >sp\|Q39Q58\|PDXA_GEOMG 4-hydroxythreonine-4-phosphate dehydrogenase OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=pdxA PE=3 SV=1 Length = 339 Score = 29.6 bits (65), Expect = 9.9 Identities = 12/28 (42%), Positives = 17/28 (60%) Frame = -2 Query: 528 TLYLIHEELHKYLRNPSKLVHCLSHC 445 T+ + H +LH+Y RNP V L+ HC Sbjct: 189 TIRITHRDLHRYFRRNPRIAVLALNPHC 216
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	-
Definition	No hits.
Align length	-
Score (bit)	-
E-value	-
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP911453\|Adiantum capillus-veneris mRNA, clone: YMU001_000005_B07. (541 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done *** No hits found ****