| BP911457 |
| Clone id |
YMU001_000005_B11 |
| Library |
YMU01 |
| Length |
498 |
| Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000005_B11. |
| Accession |
BP911457 |
| Tissue type |
prothallium |
| Developmental stage |
- |
| Contig ID |
- |
| Sequence |
ATGGAGCTGTCCCCCTTGTAATTCCAATTTTTCCTTCGTTGACTATGGTTGCGTCTAGTT
CTCCTGCTCAGCTATGTATGGTTCTAAACCGATAAAATTTTCAGTCTGGTATAAGTGTTA
CACCATATTTCTGTTCCTTCTCTTCTTGGAACCCCTCCTGTGCTACCCAACAATTAACTA
CATCATGCATTCCTAACAAATTTTCTATTTTATGCTCCTGCAGCTCAACAATGTGCTGCC
AGGTAACAAAGGATACGCTAGGTTTGATCTTACATCGTTAATAAACTCCTCCATCTCCAT
GCACATTAGTGCATCCCTTGAACAACTAATGGCTACATAGTTTATTCAAGTTGAATTGTC
ACACTTAAGAAGCATGGAAGACGTGCCCAAACTACACTGTCTCCAAATATTGTAATTTAA
TTGCATCTTCCTCTTATACTCCTCAACCCCATAACCATCAATCAAGCTTAAATTGATCTA
AAAGTTCTTTATTAAGTG |
| ■■Homology search results ■■ |
- |
| Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
| sp_hit_id |
O19071 |
| Definition |
sp|O19071|MGAT2_PIG Alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase OS=Sus scrofa |
| Align length |
52 |
| Score (bit) |
33.5 |
| E-value |
0.56 |
| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BP911457|Adiantum capillus-veneris mRNA, clone:
YMU001_000005_B11.
(498 letters)
Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|O19071|MGAT2_PIG Alpha-1,6-mannosyl-glycoprotein 2-beta-N-ace... 33 0.56
sp|Q10469|MGAT2_HUMAN Alpha-1,6-mannosyl-glycoprotein 2-beta-N-a... 33 0.56
sp|Q09326|MGAT2_RAT Alpha-1,6-mannosyl-glycoprotein 2-beta-N-ace... 32 1.2
sp|Q921V5|MGAT2_MOUSE Alpha-1,6-mannosyl-glycoprotein 2-beta-N-a... 32 1.6
sp|Q7C0F9|HMP_SHIFL Flavohemoprotein OS=Shigella flexneri GN=hmp... 32 2.1
sp|P24232|HMP_ECOLI Flavohemoprotein OS=Escherichia coli (strain... 32 2.1
sp|Q8FF30|HMP_ECOL6 Flavohemoprotein OS=Escherichia coli O6 GN=h... 32 2.1
sp|Q7ABK6|HMP_ECO57 Flavohemoprotein OS=Escherichia coli O157:H7... 32 2.1
sp|Q5TIS6|NOTO_MOUSE Homeobox protein notochord OS=Mus musculus ... 31 2.8
sp|Q9BYQ7|KRA41_HUMAN Keratin-associated protein 4-1 OS=Homo sap... 31 3.6
sp|P60371|KR106_HUMAN Keratin-associated protein 10-6 OS=Homo sa... 31 3.6
sp|P82623|SCRL4_ARATH Protein SCRL4 OS=Arabidopsis thaliana GN=S... 30 6.1
sp|P26353|HMP_SALTY Flavohemoprotein OS=Salmonella typhimurium G... 30 8.0
sp|Q8Z4M3|HMP_SALTI Flavohemoprotein OS=Salmonella typhi GN=hmp ... 30 8.0
sp|Q5PIH6|HMP_SALPA Flavohemoprotein OS=Salmonella paratyphi A G... 30 8.0
sp|Q57LF5|HMP_SALCH Flavohemoprotein OS=Salmonella choleraesuis ... 30 8.0
>sp|O19071|MGAT2_PIG Alpha-1,6-mannosyl-glycoprotein
2-beta-N-acetylglucosaminyltransferase OS=Sus scrofa
GN=MGAT2 PE=3 SV=1
Length = 446
Score = 33.5 bits (75), Expect = 0.56
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +3
Query: 57 SSPAQLCMVLNR*NFQSGISVTPYFCSFSSWNPSCATQQLTTSCIPNKFSIL 212
S+ + + L R +Q I T FC++ +N Q LT SC+P + +L
Sbjct: 314 STEHNMGLALTRDAYQKLIECTDTFCTYDDYNWDWTLQYLTVSCLPKFWKVL 365
>sp|Q10469|MGAT2_HUMAN Alpha-1,6-mannosyl-glycoprotein
2-beta-N-acetylglucosaminyltransferase OS=Homo sapiens
GN=MGAT2 PE=1 SV=1
Length = 447
Score = 33.5 bits (75), Expect = 0.56
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +3
Query: 57 SSPAQLCMVLNR*NFQSGISVTPYFCSFSSWNPSCATQQLTTSCIPNKFSIL 212
S+ + + L R +Q I T FC++ +N Q LT SC+P + +L
Sbjct: 314 STEHNMGLALTRNAYQKLIECTDTFCTYDDYNWDWTLQYLTVSCLPKFWKVL 365
>sp|Q09326|MGAT2_RAT Alpha-1,6-mannosyl-glycoprotein
2-beta-N-acetylglucosaminyltransferase OS=Rattus
norvegicus GN=Mgat2 PE=1 SV=1
Length = 442
Score = 32.3 bits (72), Expect = 1.2
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = +3
Query: 57 SSPAQLCMVLNR*NFQSGISVTPYFCSFSSWNPSCATQQLTTSCIPNKFSIL 212
S+ + + L R +Q I T FC++ +N Q LT +C+P + +L
Sbjct: 309 STEHNMGLALTRDAYQKLIECTDTFCTYDDYNWDWTLQYLTLACLPKVWKVL 360
>sp|Q921V5|MGAT2_MOUSE Alpha-1,6-mannosyl-glycoprotein
2-beta-N-acetylglucosaminyltransferase OS=Mus musculus
GN=Mgat2 PE=2 SV=1
Length = 442
Score = 32.0 bits (71), Expect = 1.6
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = +3
Query: 57 SSPAQLCMVLNR*NFQSGISVTPYFCSFSSWNPSCATQQLTTSCIPNKFSIL 212
S+ + + L R +Q I T FC++ +N Q LT +C+P + +L
Sbjct: 309 STEHNMGLALTRDAYQKLIECTDTFCTYDDYNWDWTLQYLTLACLPKIWKVL 360
>sp|Q7C0F9|HMP_SHIFL Flavohemoprotein OS=Shigella flexneri GN=hmp
PE=3 SV=1
Length = 396
Score = 31.6 bits (70), Expect = 2.1
Identities = 14/49 (28%), Positives = 24/49 (48%)
Frame = -3
Query: 169 WVAQEGFQEEKEQKYGVTLIPD*KFYRFRTIHS*AGELDATIVNEGKIG 23
W+ EGF ++ ++Y +T PD K YR G++ + N +G
Sbjct: 192 WLKPEGFPHQEIRQYSLTRKPDGKGYRIAVKREEGGQVSNWLHNHANVG 240
>sp|P24232|HMP_ECOLI Flavohemoprotein OS=Escherichia coli (strain
K12) GN=hmp PE=1 SV=1
Length = 396
Score = 31.6 bits (70), Expect = 2.1
Identities = 14/49 (28%), Positives = 24/49 (48%)
Frame = -3
Query: 169 WVAQEGFQEEKEQKYGVTLIPD*KFYRFRTIHS*AGELDATIVNEGKIG 23
W+ EGF ++ ++Y +T PD K YR G++ + N +G
Sbjct: 192 WLKPEGFPHQEIRQYSLTRKPDGKGYRIAVKREEGGQVSNWLHNHANVG 240
>sp|Q8FF30|HMP_ECOL6 Flavohemoprotein OS=Escherichia coli O6 GN=hmp
PE=3 SV=1
Length = 396
Score = 31.6 bits (70), Expect = 2.1
Identities = 14/49 (28%), Positives = 24/49 (48%)
Frame = -3
Query: 169 WVAQEGFQEEKEQKYGVTLIPD*KFYRFRTIHS*AGELDATIVNEGKIG 23
W+ EGF ++ ++Y +T PD K YR G++ + N +G
Sbjct: 192 WLKPEGFPHQEIRQYSLTRKPDGKGYRIAVKREEGGQVSNWLHNHANVG 240
>sp|Q7ABK6|HMP_ECO57 Flavohemoprotein OS=Escherichia coli O157:H7
GN=hmp PE=3 SV=1
Length = 396
Score = 31.6 bits (70), Expect = 2.1
Identities = 14/49 (28%), Positives = 24/49 (48%)
Frame = -3
Query: 169 WVAQEGFQEEKEQKYGVTLIPD*KFYRFRTIHS*AGELDATIVNEGKIG 23
W+ EGF ++ ++Y +T PD K YR G++ + N +G
Sbjct: 192 WLKPEGFPHQEIRQYSLTRKPDGKGYRIAVKREEGGQVSNWLHNHANVG 240
>sp|Q5TIS6|NOTO_MOUSE Homeobox protein notochord OS=Mus musculus
GN=Noto PE=1 SV=1
Length = 240
Score = 31.2 bits (69), Expect = 2.8
Identities = 25/76 (32%), Positives = 30/76 (39%)
Frame = +3
Query: 45 MVASSSPAQLCMVLNR*NFQSGISVTPYFCSFSSWNPSCATQQLTTSCIPNKFSILCSCS 224
+ A+S P C LN S V P+ CS SW P+ L+ P LCS S
Sbjct: 54 LAATSLPLSTCTSLNLLGAVSQYGVLPWVCSTGSWLPA----YLSVGVYP-----LCSMS 104
Query: 225 STMCCQVTKDTLGLIL 272
VT GL L
Sbjct: 105 CVPGLNVTHHQQGLRL 120
>sp|Q9BYQ7|KRA41_HUMAN Keratin-associated protein 4-1 OS=Homo
sapiens GN=KRTAP4-1 PE=2 SV=2
Length = 127
Score = 30.8 bits (68), Expect = 3.6
Identities = 17/42 (40%), Positives = 19/42 (45%), Gaps = 3/42 (7%)
Frame = +3
Query: 132 CSFSSWNPSCATQQLTTSCIPNKFSILC---SCSSTMCCQVT 248
C + PSC TT C P+ C SCS T CCQ T
Sbjct: 20 CQETCCRPSCCQ---TTCCCPSCVVSSCCRPSCSQTTCCQTT 58
|
| TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
| tr_hit_id |
B5X4D8 |
| Definition |
tr|B5X4D8|B5X4D8_SALSA Alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase OS=Salmo salar |
| Align length |
54 |
| Score (bit) |
36.6 |
| E-value |
0.68 |
| Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BP911457|Adiantum capillus-veneris mRNA, clone:
YMU001_000005_B11.
(498 letters)
Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tr|B5X4D8|B5X4D8_SALSA Alpha-1,6-mannosyl-glycoprotein 2-beta-N-... 37 0.68
tr|A4IG58|A4IG58_DANRE Novel protein similar to vertebrate manno... 35 2.6
tr|B6FFA6|B6FFA6_9ENTR Putative uncharacterized protein OS=Enter... 33 5.7
tr|Q4R3T7|Q4R3T7_MACFA Testis cDNA clone: QtsA-14162, similar to... 33 5.7
tr|B4DDK9|B4DDK9_HUMAN cDNA FLJ55952, highly similar to Alpha-1,... 33 5.7
tr|B3KQM0|B3KQM0_HUMAN cDNA FLJ90718 fis, clone PLACE1008716, hi... 33 5.7
tr|B3KPC5|B3KPC5_HUMAN cDNA FLJ31605 fis, clone NT2RI2002729, hi... 33 5.7
tr|A8AD36|A8AD36_CITK8 Putative uncharacterized protein OS=Citro... 33 9.8
>tr|B5X4D8|B5X4D8_SALSA Alpha-1,6-mannosyl-glycoprotein
2-beta-N-acetylglucosaminyltransferase OS=Salmo salar
GN=MGAT2 PE=2 SV=1
Length = 465
Score = 36.6 bits (83), Expect = 0.68
Identities = 16/54 (29%), Positives = 30/54 (55%)
Frame = +3
Query: 57 SSPAQLCMVLNR*NFQSGISVTPYFCSFSSWNPSCATQQLTTSCIPNKFSILCS 218
S+ + M L+R +Q I T FC++ +N + Q LT +C+P+ + ++ S
Sbjct: 328 STEHNMGMALSRETYQKLIQCTDAFCTYDDYNWDWSLQHLTVTCLPSYWKVMVS 381
>tr|A4IG58|A4IG58_DANRE Novel protein similar to vertebrate mannosyl
(Alpha-1,6-)-glycoprotein
beta-1,2-N-acetylglucosaminyltransferase (MGAT2,
zgc:162268) OS=Danio rerio GN=CH73-301C19.1 PE=2 SV=1
Length = 450
Score = 34.7 bits (78), Expect = 2.6
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +3
Query: 57 SSPAQLCMVLNR*NFQSGISVTPYFCSFSSWNPSCATQQLTTSCIPNKFSILCS 218
S+ + M LNR +Q + T FC++ +N + Q LT +C+P ++ S
Sbjct: 313 STEHNMGMALNRDAYQKLLRCTDAFCTYDDYNWDWSLQHLTVTCLPAFLKVMVS 366
>tr|B6FFA6|B6FFA6_9ENTR Putative uncharacterized protein
OS=Enterobacter cancerogenus ATCC 35316 GN=ENTCAN_03428
PE=4 SV=1
Length = 401
Score = 33.5 bits (75), Expect = 5.7
Identities = 14/49 (28%), Positives = 27/49 (55%)
Frame = -3
Query: 169 WVAQEGFQEEKEQKYGVTLIPD*KFYRFRTIHS*AGELDATIVNEGKIG 23
W+ +GF ++ ++Y +T P+ K YR G++ + + NE K+G
Sbjct: 197 WLKPDGFPHQEIRQYSLTRKPNGKGYRIAVKREEGGQVSSWLHNEAKVG 245
>tr|Q4R3T7|Q4R3T7_MACFA Testis cDNA clone: QtsA-14162, similar to
human mannosyl (alpha-1,6-)-glycoproteinbeta-1,2-N-
acetylglucosaminyltransferase (MGAT2), OS=Macaca
fascicularis PE=2 SV=1
Length = 401
Score = 33.5 bits (75), Expect = 5.7
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +3
Query: 57 SSPAQLCMVLNR*NFQSGISVTPYFCSFSSWNPSCATQQLTTSCIPNKFSIL 212
S+ + + L R +Q I T FC++ +N Q LT SC+P + +L
Sbjct: 268 STEHNMGLALTRNAYQKLIECTDTFCTYDDYNWDWTLQYLTVSCLPKFWKVL 319
>tr|B4DDK9|B4DDK9_HUMAN cDNA FLJ55952, highly similar to
Alpha-1,6-mannosyl-glycoprotein2-beta-N-
acetylglucosaminyltransferase (EC 2.4.1.143) OS=Homo
sapiens PE=2 SV=1
Length = 453
Score = 33.5 bits (75), Expect = 5.7
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +3
Query: 57 SSPAQLCMVLNR*NFQSGISVTPYFCSFSSWNPSCATQQLTTSCIPNKFSIL 212
S+ + + L R +Q I T FC++ +N Q LT SC+P + +L
Sbjct: 320 STEHNMGLALTRNAYQKLIECTDTFCTYDDYNWDWTLQYLTVSCLPKFWKVL 371
>tr|B3KQM0|B3KQM0_HUMAN cDNA FLJ90718 fis, clone PLACE1008716,
highly similar to
Alpha-1,6-mannosyl-glycoprotein2-beta-N-
acetylglucosaminyltransferase (EC 2.4.1.143) OS=Homo
sapiens PE=2 SV=1
Length = 447
Score = 33.5 bits (75), Expect = 5.7
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +3
Query: 57 SSPAQLCMVLNR*NFQSGISVTPYFCSFSSWNPSCATQQLTTSCIPNKFSIL 212
S+ + + L R +Q I T FC++ +N Q LT SC+P + +L
Sbjct: 314 STEHNMGLALTRNAYQKLIECTDTFCTYDDYNWDWTLQYLTVSCLPKFWKVL 365
>tr|B3KPC5|B3KPC5_HUMAN cDNA FLJ31605 fis, clone NT2RI2002729,
highly similar to
Alpha-1,6-mannosyl-glycoprotein2-beta-N-
acetylglucosaminyltransferase (Mannosyl
(Alpha-1,6-)-glycoprotein
beta-1,2-N-acetylglucosaminyltransferase) OS=Homo
sapiens GN=MGAT2 PE=2 SV=1
Length = 447
Score = 33.5 bits (75), Expect = 5.7
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +3
Query: 57 SSPAQLCMVLNR*NFQSGISVTPYFCSFSSWNPSCATQQLTTSCIPNKFSIL 212
S+ + + L R +Q I T FC++ +N Q LT SC+P + +L
Sbjct: 314 STEHNMGLALTRNAYQKLIECTDTFCTYDDYNWDWTLQYLTVSCLPKFWKVL 365
>tr|A8AD36|A8AD36_CITK8 Putative uncharacterized protein
OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83
/ SGSC4696) GN=CKO_00235 PE=3 SV=1
Length = 396
Score = 32.7 bits (73), Expect = 9.8
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = -3
Query: 169 WVAQEGFQEEKEQKYGVTLIPD*KFYRFRTIHS*AGELDATIVNEGKIG 23
W+ EGF ++ ++Y +T PD K YR G++ + + N +G
Sbjct: 192 WLKPEGFPHQEIRQYSLTRKPDGKGYRIAVKREDGGQVSSWLHNHASVG 240
|