| BP911470 |
| Clone id |
YMU001_000005_C12 |
| Library |
YMU01 |
| Length |
498 |
| Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000005_C12. |
| Accession |
BP911470 |
| Tissue type |
prothallium |
| Developmental stage |
- |
| Contig ID |
- |
| Sequence |
CCGGCCTAGCTCCACCTCTACCAGCCGCTGAACAACTGAATGCAGGAGCCAGCACCAATG
GAGGAGGTCCTGCTTGCCAGGAGCTTACAACAGCAGGGGACAGCATTAGTGCCTGCTCTC
TTTTGTTTTGGTGACTCTCTTGTAGATGATGGGAACAACAATGTTCGGCGCTCTTGATGA
TCTCTTTGCCACAACTGTAAACCCTAAGGATGTGGGCATTCTGATTGTGTATAGGATCGA
GGAGATAGGAGTAGATAGGTGCAAATAAGGAGCACACAGCTATCATGATCTTGGAATTCA
TCTTGCAAGACTGGCTCTGTGAAGGAAGTTTGTTAGACACAGAGGAGAGCTTTGTTCTGG
TCGGAGAAGCAAACACCAAAGGGGTTGATGTTTGAGGGGGGGTGAACTCCTGTAGAGGAG
ATTTCTTATTGCTTCTATGCTTCTTGTATAGGCTCANGGTGGCACATTAGATTTAGTTAC
TGTGGAATCATTTGAAGA |
| ■■Homology search results ■■ |
- |
| Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
| sp_hit_id |
Q93YW8 |
| Definition |
sp|Q93YW8|Y4897_ARATH Uncharacterized GDSL lipase family protein At4g18970 OS=Arabidopsis thaliana |
| Align length |
22 |
| Score (bit) |
34.3 |
| E-value |
0.33 |
| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BP911470|Adiantum capillus-veneris mRNA, clone:
YMU001_000005_C12.
(498 letters)
Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q93YW8|Y4897_ARATH Uncharacterized GDSL lipase family protein... 34 0.33
sp|P40602|APG_ARATH Anter-specific proline-rich protein APG OS=A... 33 0.96
sp|P40603|APG_BRANA Anther-specific proline-rich protein APG (Fr... 32 1.6
sp|Q9LN49|KCS4_ARATH 3-ketoacyl-CoA synthase 4 OS=Arabidopsis th... 31 3.6
sp|O48780|KCS11_ARATH 3-ketoacyl-CoA synthase 11 OS=Arabidopsis ... 31 3.6
sp|Q9HCM1|CL035_HUMAN Uncharacterized protein C12orf35 OS=Homo s... 30 4.7
sp|P59821|Y839_HELHP UPF0090 protein HH_0839 OS=Helicobacter hep... 30 6.1
sp|Q9PU36|PCLO_CHICK Protein piccolo (Fragment) OS=Gallus gallus... 30 6.1
sp|Q08206|YO036_YEAST Uncharacterized protein YOL036W OS=Sacchar... 30 8.0
sp|P14083|TKR_DROME Protein TKR OS=Drosophila melanogaster GN=Tk... 30 8.0
sp|P57699|ATKB_HALSA Potassium-transporting ATPase B chain OS=Ha... 30 8.0
>sp|Q93YW8|Y4897_ARATH Uncharacterized GDSL lipase family protein
At4g18970 OS=Arabidopsis thaliana GN=At4g18970 PE=2 SV=1
Length = 361
Score = 34.3 bits (77), Expect = 0.33
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = +1
Query: 97 GTALVPALFCFGDSLVDDGNNN 162
G + P F FGDSLVD GNNN
Sbjct: 22 GDPIAPCYFIFGDSLVDSGNNN 43
>sp|P40602|APG_ARATH Anter-specific proline-rich protein APG
OS=Arabidopsis thaliana GN=APG PE=2 SV=2
Length = 534
Score = 32.7 bits (73), Expect = 0.96
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = +1
Query: 49 PAPMEEVLLARSLQQQGTALVPALFCFGDSLVDDGNNN 162
P P A S + +PA+F FGDS+ D GNNN
Sbjct: 182 PTPAPSPKPAPSPPKPENKTIPAVFFFGDSVFDTGNNN 219
>sp|P40603|APG_BRANA Anther-specific proline-rich protein APG
(Fragment) OS=Brassica napus GN=APG PE=2 SV=1
Length = 449
Score = 32.0 bits (71), Expect = 1.6
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +1
Query: 109 VPALFCFGDSLVDDGNNN 162
+PA+F FGDS+ D GNNN
Sbjct: 123 IPAVFFFGDSIFDTGNNN 140
>sp|Q9LN49|KCS4_ARATH 3-ketoacyl-CoA synthase 4 OS=Arabidopsis
thaliana GN=KCS4 PE=2 SV=1
Length = 516
Score = 30.8 bits (68), Expect = 3.6
Identities = 15/21 (71%), Positives = 18/21 (85%), Gaps = 1/21 (4%)
Frame = +2
Query: 170 ALDDLFATT-VNPKDVGILIV 229
ALD+LFA T V PKD+GIL+V
Sbjct: 193 ALDNLFANTNVKPKDIGILVV 213
>sp|O48780|KCS11_ARATH 3-ketoacyl-CoA synthase 11 OS=Arabidopsis
thaliana GN=KCS11 PE=1 SV=1
Length = 509
Score = 30.8 bits (68), Expect = 3.6
Identities = 15/21 (71%), Positives = 18/21 (85%), Gaps = 1/21 (4%)
Frame = +2
Query: 170 ALDDLFA-TTVNPKDVGILIV 229
A+D+L A T VNPKD+GILIV
Sbjct: 181 AIDELLAKTNVNPKDIGILIV 201
>sp|Q9HCM1|CL035_HUMAN Uncharacterized protein C12orf35 OS=Homo
sapiens GN=C12orf35 PE=1 SV=2
Length = 1747
Score = 30.4 bits (67), Expect = 4.7
Identities = 30/133 (22%), Positives = 59/133 (44%), Gaps = 9/133 (6%)
Frame = -3
Query: 460 TXSLYKKHRSNKKSPLQEFTPPQTS---TPLVFASPTRTKLSSVSNKLPSQSQSCKMNSK 290
T + Y + N K L++ Q+ TP++ + R + V + +++Q C +NS
Sbjct: 430 TNTSYSEPAQNSKLSLKQTAKIQSGPQITPVMPENAERQTPTVVESAETNKTQ-CMLNSD 488
Query: 289 IMIAVCSLFAPIYSYLLDPIHNQN------AHILRVYSCGKEIIKSAEHCCSHHLQESHQ 128
I C F + S L +P++++ +H ++V + ++ + + L +
Sbjct: 489 IQEVNCRRFNQVDSVLPNPVYSEKRPMPDPSHDVKVLTSKTSAVEMTQAVLNTQLSSENV 548
Query: 127 NKREQALMLSPAV 89
K EQ SPAV
Sbjct: 549 TKVEQN---SPAV 558
>sp|P59821|Y839_HELHP UPF0090 protein HH_0839 OS=Helicobacter
hepaticus GN=HH_0839 PE=3 SV=1
Length = 157
Score = 30.0 bits (66), Expect = 6.1
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Frame = -3
Query: 343 SVSNKLPSQSQSCKMNSKIMIAVCSLFAPIYSYLLD-PIHNQNAHILRVYSCGKE-IIKS 170
S++ K P Q Q CK + + C + + S LLD N + L V S G E ++K
Sbjct: 38 SITRKAPMQKQDCKNGLAVSLQDCQNVSELISPLLDVEDENLKDYNLEVSSPGLERVLKK 97
Query: 169 AEH 161
+H
Sbjct: 98 PQH 100
>sp|Q9PU36|PCLO_CHICK Protein piccolo (Fragment) OS=Gallus gallus
GN=PCLO PE=2 SV=1
Length = 5120
Score = 30.0 bits (66), Expect = 6.1
Identities = 27/111 (24%), Positives = 49/111 (44%), Gaps = 14/111 (12%)
Frame = -3
Query: 403 TPPQTSTPLVFASPT-------------RTKLSSVSNKLPSQSQSCKMNSKIMIAVCSLF 263
TPP +P+ ASPT R+ S S + S + +++ + +I V ++
Sbjct: 1743 TPPSNLSPIEDASPTEELRQAAEMEELHRSSCSEYSPSIESDPEGFEISPEKIIEVQKVY 1802
Query: 262 -APIYSYLLDPIHNQNAHILRVYSCGKEIIKSAEHCCSHHLQESHQNKREQ 113
P L P + L+ S G++ +KSAE + ++H++K Q
Sbjct: 1803 KLPTAVSLYSPTDEKLIGALKEES-GQKTLKSAEEVYEEMIHKTHKSKSFQ 1852
>sp|Q08206|YO036_YEAST Uncharacterized protein YOL036W
OS=Saccharomyces cerevisiae GN=YOL036W PE=1 SV=1
Length = 761
Score = 29.6 bits (65), Expect = 8.0
Identities = 34/135 (25%), Positives = 51/135 (37%), Gaps = 12/135 (8%)
Frame = -3
Query: 463 ATXSLYKKHRSNKKSPLQEFTPPQTSTPLVFASPTRTKL-------SSVSNKLPSQSQSC 305
A+ +L +K + S L P ST F S + S++ NKLP + SC
Sbjct: 423 ASSALLRKTSAKNCSNLTRTNTPTLSTSSTFESDLNARQPMLIRRSSTIDNKLPRRQLSC 482
Query: 304 -----KMNSKIMIAVCSLFAPIYSYLLDPIHNQNAHILRVYSCGKEIIKSAEHCCSHHLQ 140
++NS A S + +L N H+ R S G +I +
Sbjct: 483 SKLYSRLNSDSKFANSSRAS---EEVLVSTPNDTEHVYRKTSLGSKIKRGFTRIL----- 534
Query: 139 ESHQNKREQALMLSP 95
S N ++ L LSP
Sbjct: 535 -SDSNNSKEILTLSP 548
>sp|P14083|TKR_DROME Protein TKR OS=Drosophila melanogaster GN=Tkr
PE=2 SV=2
Length = 1046
Score = 29.6 bits (65), Expect = 8.0
Identities = 19/62 (30%), Positives = 26/62 (41%), Gaps = 3/62 (4%)
Frame = -3
Query: 190 GKEIIK---SAEHCCSHHLQESHQNKREQALMLSPAVVSSWQAGPPPLVLAPAFSCSAAG 20
GKE+I S+ C S++ S Q +MLS + A P P + SCS
Sbjct: 476 GKELISGPSSSADCESNNNNSSKLQDNNQRIMLSLKDIRQLNANPNPTAIHTPTSCSGGN 535
Query: 19 RG 14
G
Sbjct: 536 NG 537
|
| TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
| tr_hit_id |
A7Q7S7 |
| Definition |
tr|A7Q7S7|A7Q7S7_VITVI Chromosome chr18 scaffold_61, whole genome shotgun sequence OS=Vitis vinifera |
| Align length |
27 |
| Score (bit) |
42.4 |
| E-value |
0.012 |
| Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BP911470|Adiantum capillus-veneris mRNA, clone:
YMU001_000005_C12.
(498 letters)
Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tr|A7Q7S7|A7Q7S7_VITVI Chromosome chr18 scaffold_61, whole genom... 42 0.012
tr|A5C7M7|A5C7M7_VITVI Putative uncharacterized protein OS=Vitis... 42 0.012
tr|Q9SF78|Q9SF78_ARATH Putative GDSL-motif lipase/hydrolase; 245... 40 0.079
tr|Q9FNP2|Q9FNP2_ARATH GDSL-motif lipase/acylhydrolase-like prot... 39 0.10
tr|Q6ZCC3|Q6ZCC3_ORYSJ Os08g0112900 protein OS=Oryza sativa subs... 39 0.10
tr|B8BA59|B8BA59_ORYSI Putative uncharacterized protein OS=Oryza... 39 0.10
tr|A3BP04|A3BP04_ORYSJ Putative uncharacterized protein OS=Oryza... 39 0.10
tr|Q9LQ33|Q9LQ33_ARATH F14M2.7 protein OS=Arabidopsis thaliana G... 39 0.14
tr|Q8L5Z1|Q8L5Z1_ARATH Putative uncharacterized protein At1g3381... 39 0.14
tr|Q2QU40|Q2QU40_ORYSJ GDSL-motif lipase/hydrolase, putative (Pu... 39 0.18
tr|Q0INY8|Q0INY8_ORYSJ Os12g0274200 protein OS=Oryza sativa subs... 39 0.18
tr|B4FSM0|B4FSM0_MAIZE Anther-specific proline-rich protein APG ... 38 0.23
tr|Q6YUS8|Q6YUS8_ORYSJ Putative GDSL-motif lipase/hydrolase prot... 38 0.30
tr|A7PQ38|A7PQ38_VITVI Chromosome chr18 scaffold_24, whole genom... 38 0.30
tr|A7PAG4|A7PAG4_VITVI Chromosome chr14 scaffold_9, whole genome... 38 0.30
tr|A5BFR2|A5BFR2_VITVI Putative uncharacterized protein OS=Vitis... 38 0.30
tr|Q9LFV4|Q9LFV4_ARATH Putative uncharacterized protein F14F8_10... 37 0.39
tr|Q8LFJ9|Q8LFJ9_ARATH Putative uncharacterized protein OS=Arabi... 37 0.39
tr|Q75II0|Q75II0_ORYSJ Os05g0518300 protein OS=Oryza sativa subs... 37 0.39
tr|A9SD49|A9SD49_PHYPA Predicted protein OS=Physcomitrella paten... 37 0.39
tr|A2Y6K4|A2Y6K4_ORYSI Putative uncharacterized protein OS=Oryza... 37 0.39
tr|A2X074|A2X074_ORYSI Putative uncharacterized protein OS=Oryza... 37 0.39
tr|Q0BAJ5|Q0BAJ5_BURCM Putative uncharacterized protein OS=Burkh... 37 0.40
tr|Q9FYD3|Q9FYD3_ARATH Putative uncharacterized protein F22J12_1... 37 0.52
tr|Q9C7N4|Q9C7N4_ARATH Lipase/hydrolase, putative; 118270-120144... 37 0.52
tr|Q9AUJ9|Q9AUJ9_ORYSA Putative proline-rich protein OS=Oryza sa... 37 0.52
tr|Q8LD01|Q8LD01_ARATH Lipase/hydrolase, putative OS=Arabidopsis... 37 0.52
tr|Q7Y007|Q7Y007_ORYSJ Os03g0683800 protein OS=Oryza sativa subs... 37 0.52
tr|A9T2G8|A9T2G8_PHYPA Predicted protein OS=Physcomitrella paten... 37 0.52
tr|A7PQL0|A7PQL0_VITVI Chromosome chr6 scaffold_25, whole genome... 37 0.52
>tr|A7Q7S7|A7Q7S7_VITVI Chromosome chr18 scaffold_61, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00031981001
PE=4 SV=1
Length = 363
Score = 42.4 bits (98), Expect = 0.012
Identities = 18/27 (66%), Positives = 21/27 (77%)
Frame = +1
Query: 82 SLQQQGTALVPALFCFGDSLVDDGNNN 162
S Q + VPA+FCFGDSL+DDGNNN
Sbjct: 23 STQVARSQRVPAIFCFGDSLIDDGNNN 49
>tr|A5C7M7|A5C7M7_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_030206 PE=4 SV=1
Length = 385
Score = 42.4 bits (98), Expect = 0.012
Identities = 18/27 (66%), Positives = 21/27 (77%)
Frame = +1
Query: 82 SLQQQGTALVPALFCFGDSLVDDGNNN 162
S Q + VPA+FCFGDSL+DDGNNN
Sbjct: 23 STQVARSQRVPAIFCFGDSLIDDGNNN 49
>tr|Q9SF78|Q9SF78_ARATH Putative GDSL-motif lipase/hydrolase;
24593-26678 (F14O23.4 protein) OS=Arabidopsis thaliana
GN=F14O23.4 PE=4 SV=1
Length = 384
Score = 39.7 bits (91), Expect = 0.079
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +1
Query: 97 GTALVPALFCFGDSLVDDGNNN 162
G +VPALF FGDSL+D+GNNN
Sbjct: 49 GDGIVPALFVFGDSLIDNGNNN 70
>tr|Q9FNP2|Q9FNP2_ARATH GDSL-motif lipase/acylhydrolase-like protein
OS=Arabidopsis thaliana GN=At5g08460 PE=4 SV=1
Length = 385
Score = 39.3 bits (90), Expect = 0.10
Identities = 18/32 (56%), Positives = 22/32 (68%)
Frame = +1
Query: 67 VLLARSLQQQGTALVPALFCFGDSLVDDGNNN 162
VL + TA+ PA+F FGDSLVD+GNNN
Sbjct: 33 VLAGGEDSSETTAMFPAMFVFGDSLVDNGNNN 64
>tr|Q6ZCC3|Q6ZCC3_ORYSJ Os08g0112900 protein OS=Oryza sativa subsp.
japonica GN=P0498H04.26 PE=4 SV=1
Length = 381
Score = 39.3 bits (90), Expect = 0.10
Identities = 16/20 (80%), Positives = 19/20 (95%)
Frame = +1
Query: 103 ALVPALFCFGDSLVDDGNNN 162
A+VPALF FGDSL+D+GNNN
Sbjct: 46 AMVPALFVFGDSLIDNGNNN 65
>tr|B8BA59|B8BA59_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_27577 PE=4 SV=1
Length = 381
Score = 39.3 bits (90), Expect = 0.10
Identities = 16/20 (80%), Positives = 19/20 (95%)
Frame = +1
Query: 103 ALVPALFCFGDSLVDDGNNN 162
A+VPALF FGDSL+D+GNNN
Sbjct: 46 AMVPALFVFGDSLIDNGNNN 65
>tr|A3BP04|A3BP04_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_024776 PE=4 SV=1
Length = 379
Score = 39.3 bits (90), Expect = 0.10
Identities = 16/20 (80%), Positives = 19/20 (95%)
Frame = +1
Query: 103 ALVPALFCFGDSLVDDGNNN 162
A+VPALF FGDSL+D+GNNN
Sbjct: 44 AMVPALFVFGDSLIDNGNNN 63
>tr|Q9LQ33|Q9LQ33_ARATH F14M2.7 protein OS=Arabidopsis thaliana
GN=F14M2.7 PE=4 SV=1
Length = 390
Score = 38.9 bits (89), Expect = 0.14
Identities = 18/25 (72%), Positives = 19/25 (76%)
Frame = +1
Query: 88 QQQGTALVPALFCFGDSLVDDGNNN 162
Q Q A VP LF FGDSLVD+GNNN
Sbjct: 25 QPQQQAQVPCLFIFGDSLVDNGNNN 49
>tr|Q8L5Z1|Q8L5Z1_ARATH Putative uncharacterized protein At1g33810
OS=Arabidopsis thaliana GN=At1g33810 PE=2 SV=1
Length = 370
Score = 38.9 bits (89), Expect = 0.14
Identities = 18/25 (72%), Positives = 19/25 (76%)
Frame = +1
Query: 88 QQQGTALVPALFCFGDSLVDDGNNN 162
Q Q A VP LF FGDSLVD+GNNN
Sbjct: 25 QPQQQAQVPCLFIFGDSLVDNGNNN 49
>tr|Q2QU40|Q2QU40_ORYSJ GDSL-motif lipase/hydrolase, putative
(Putative uncharacterized protein) OS=Oryza sativa
subsp. japonica GN=LOC_Os12g17570 PE=4 SV=1
Length = 406
Score = 38.5 bits (88), Expect = 0.18
Identities = 19/31 (61%), Positives = 23/31 (74%)
Frame = +1
Query: 70 LLARSLQQQGTALVPALFCFGDSLVDDGNNN 162
L+A + QQQ LVP ++ FGDSLVD GNNN
Sbjct: 7 LVAAAAQQQ--QLVPCMYIFGDSLVDSGNNN 35
|