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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP911479
Clone id YMU001_000005_D10
Library
Length 561
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000005_D10.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
CGCAGGATGGCTGAGTTCCCTTTGGACCCGATGCTCTCAAAGATGATAGTGGCTTCCGAT
AAGTTCAAATGTTCAGAGGAGATTGTGACAATAGCTGCAATGTTGTCTGTTGGCAATTCT
ATTTTCTATCGTCCAAAGGACAAACAAGTGCATGCAGATAATGCAAAGATGAACTTTCAT
ACTGGAAACGTGGGCGACCAGATAGCCTTGCTCAAGGTATATGATACATGGAAGGAGACC
AACTATTCAACACAGTGGTGCTATGAGAATTACATACAGGTAAGGAGTATGAAACGGGCT
CGTGATATCAGGGATCAGCTTGAAGGGCTTCTAGATCGAGTTGAGATTGAGCCTAGCAGC
AGCCCAAATGAAATAGAAGCTATAAAGAAGGCCATTACATCAGGCTATTTCTATCACACA
GCAAAGCTGCAAAAAAATGGTTCCTATCGAACTATTAAAAATCCACAAACTGTGCACATT
CATCCAAGTTCAGGACTTGCTGAGGTTTTACCACGATGACTGGTATATTTTGAGTTGATC
ATTACAACCAAGGAGTATCTG
■■Homology search results ■■ -
sp_hit_id Q7YR39
Definition sp|Q7YR39|DHX16_PANTR Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 OS=Pan troglodytes
Align length 187
Score (bit) 238.0
E-value 1.0e-62
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP911479|Adiantum capillus-veneris mRNA, clone:
YMU001_000005_D10.
         (561 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q7YR39|DHX16_PANTR Putative pre-mRNA-splicing factor ATP-depe...   238   1e-62
sp|O60231|DHX16_HUMAN Putative pre-mRNA-splicing factor ATP-depe...   238   1e-62
sp|Q54MH3|DHX16_DICDI Putative pre-mRNA-splicing factor ATP-depe...   216   5e-56
sp|O45244|DHX16_CAEEL Probable pre-mRNA-splicing factor ATP-depe...   210   3e-54
sp|Q10752|CDC28_SCHPO Pre-mRNA-splicing factor ATP-dependent RNA...   189   6e-48
sp|Q09530|MOG5_CAEEL Probable pre-mRNA-splicing factor ATP-depen...   188   2e-47
sp|A2A4P0|DHX8_MOUSE ATP-dependent RNA helicase DHX8 OS=Mus musc...   185   1e-46
sp|Q14562|DHX8_HUMAN ATP-dependent RNA helicase DHX8 OS=Homo sap...   185   1e-46
sp|Q54F05|DHX8_DICDI ATP-dependent RNA helicase dhx8 OS=Dictyost...   177   2e-44
sp|Q38953|DHX8_ARATH Probable pre-mRNA-splicing factor ATP-depen...   176   9e-44
sp|O42643|PRP22_SCHPO Pre-mRNA-splicing factor ATP-dependent RNA...   147   5e-35
sp|P24384|PRP22_YEAST Pre-mRNA-splicing factor ATP-dependent RNA...   145   1e-34
sp|O22899|DHX15_ARATH Probable pre-mRNA-splicing factor ATP-depe...   144   2e-34
sp|Q5RAZ4|DHX15_PONAB Putative pre-mRNA-splicing factor ATP-depe...   143   7e-34
sp|O35286|DHX15_MOUSE Putative pre-mRNA-splicing factor ATP-depe...   143   7e-34
sp|O43143|DHX15_HUMAN Putative pre-mRNA-splicing factor ATP-depe...   143   7e-34
sp|P34498|MOG1_CAEEL Probable pre-mRNA-splicing factor ATP-depen...   139   7e-33
sp|Q17R09|PRP16_BOVIN Pre-mRNA-splicing factor ATP-dependent RNA...   139   1e-32
sp|Q92620|PRP16_HUMAN Pre-mRNA-splicing factor ATP-dependent RNA...   138   2e-32
sp|P15938|PRP16_YEAST Pre-mRNA-splicing factor ATP-dependent RNA...   137   5e-32
sp|Q54NJ4|DHX15_DICDI Putative pre-mRNA-splicing factor ATP-depe...   137   5e-32
sp|Q20875|DHX15_CAEEL Putative pre-mRNA-splicing factor ATP-depe...   134   4e-31
sp|Q9P774|PRP16_SCHPO Pre-mRNA-splicing factor ATP-dependent RNA...   133   7e-31
sp|Q9H5Z1|DHX35_HUMAN Probable ATP-dependent RNA helicase DHX35 ...   130   6e-30
sp|Q5RBD4|DHX35_PONAB Probable ATP-dependent RNA helicase DHX35 ...   129   1e-29
sp|O42945|DHX15_SCHPO Probable pre-mRNA-splicing factor ATP-depe...   119   8e-27
sp|Q80VY9|DHX33_MOUSE Putative ATP-dependent RNA helicase DHX33 ...   119   1e-26
sp|Q9H6R0|DHX33_HUMAN Putative ATP-dependent RNA helicase DHX33 ...   119   1e-26
sp|P53131|PRP43_YEAST Pre-mRNA-splicing factor ATP-dependent RNA...   117   4e-26
sp|O17438|DHX15_STRPU Putative pre-mRNA-splicing factor ATP-depe...   109   1e-23

>sp|Q7YR39|DHX16_PANTR Putative pre-mRNA-splicing factor ATP-dependent
            RNA helicase DHX16 OS=Pan troglodytes GN=DHX16 PE=3 SV=1
          Length = 1044

 Score =  238 bits (608), Expect = 1e-62
 Identities = 115/187 (61%), Positives = 146/187 (78%)
 Frame = +1

Query: 1    RRMAEFPLDPMLSKMIVASDKFKCSEEIVTIAAMLSVGNSIFYRPKDKQVHADNAKMNFH 180
            R+MAE P+DPMLSKMI+AS+K+ CSEEI+T+AAMLSV NSIFYRPKDK VHADNA++NF 
Sbjct: 816  RKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADNARVNFF 875

Query: 181  TGNVGDQIALLKVYDTWKETNYSTQWCYENYIQVRSMKRARDIRDQLEGLLDRVXXXXXX 360
                GD + LL VY  W E+ YS+QWCYEN++Q RSM+RARD+R+QLEGLL+RV      
Sbjct: 876  LPG-GDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVEVGLSS 934

Query: 361  XXXXXXAIKKAITSGYFYHTAKLQKNGSYRTIKNPQTVHIHPSSGLAEVLPR*LVYFELI 540
                   ++KAIT+GYFYHTA+L ++G YRT+K  QTV IHP+S L E  PR L+Y EL+
Sbjct: 935  CQGDYIRVRKAITAGYFYHTARLTRSG-YRTVKQQQTVFIHPNSSLFEQQPRWLLYHELV 993

Query: 541  ITTKEYL 561
            +TTKE++
Sbjct: 994  LTTKEFM 1000


>sp|O60231|DHX16_HUMAN Putative pre-mRNA-splicing factor ATP-dependent
            RNA helicase DHX16 OS=Homo sapiens GN=DHX16 PE=1 SV=2
          Length = 1041

 Score =  238 bits (608), Expect = 1e-62
 Identities = 115/187 (61%), Positives = 146/187 (78%)
 Frame = +1

Query: 1    RRMAEFPLDPMLSKMIVASDKFKCSEEIVTIAAMLSVGNSIFYRPKDKQVHADNAKMNFH 180
            R+MAE P+DPMLSKMI+AS+K+ CSEEI+T+AAMLSV NSIFYRPKDK VHADNA++NF 
Sbjct: 813  RKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADNARVNFF 872

Query: 181  TGNVGDQIALLKVYDTWKETNYSTQWCYENYIQVRSMKRARDIRDQLEGLLDRVXXXXXX 360
                GD + LL VY  W E+ YS+QWCYEN++Q RSM+RARD+R+QLEGLL+RV      
Sbjct: 873  LPG-GDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVEVGLSS 931

Query: 361  XXXXXXAIKKAITSGYFYHTAKLQKNGSYRTIKNPQTVHIHPSSGLAEVLPR*LVYFELI 540
                   ++KAIT+GYFYHTA+L ++G YRT+K  QTV IHP+S L E  PR L+Y EL+
Sbjct: 932  CQGDYIRVRKAITAGYFYHTARLTRSG-YRTVKQQQTVFIHPNSSLFEQQPRWLLYHELV 990

Query: 541  ITTKEYL 561
            +TTKE++
Sbjct: 991  LTTKEFM 997


>sp|Q54MH3|DHX16_DICDI Putative pre-mRNA-splicing factor ATP-dependent
            RNA helicase DHX16 OS=Dictyostelium discoideum GN=dhx16
            PE=3 SV=1
          Length = 1106

 Score =  216 bits (551), Expect = 5e-56
 Identities = 107/188 (56%), Positives = 144/188 (76%), Gaps = 1/188 (0%)
 Frame = +1

Query: 1    RRMAEFPLDPMLSKMIVASDKFKCSEEIVTIAAMLSVGNSIFYRPKDKQVHADNA-KMNF 177
            R+MAEFP+DP LSKMI+AS+K+KCSEEI+TI AMLSVGN+IFYRPKDK   AD A K+ F
Sbjct: 880  RKMAEFPVDPQLSKMIIASEKYKCSEEILTICAMLSVGNTIFYRPKDKAFAADAARKLFF 939

Query: 178  HTGNVGDQIALLKVYDTWKETNYSTQWCYENYIQVRSMKRARDIRDQLEGLLDRVXXXXX 357
            H    GD + L+ V++ W+E+ Y+ QWC+EN+IQ RSMKRA+D+RDQLE LL+RV     
Sbjct: 940  HPQ--GDHLTLMNVFNQWRESGYAVQWCFENFIQHRSMKRAQDVRDQLELLLERVEIPLV 997

Query: 358  XXXXXXXAIKKAITSGYFYHTAKLQKNGSYRTIKNPQTVHIHPSSGLAEVLPR*LVYFEL 537
                   +I+K I SG+FY++AKL+K+G +RT K+ Q+V IHPSS L +  P+ +VY EL
Sbjct: 998  SNVDDTDSIRKCIASGFFYNSAKLEKSGLFRTTKHNQSVQIHPSSCLFQSPPKWVVYHEL 1057

Query: 538  IITTKEYL 561
            ++TTKE++
Sbjct: 1058 VLTTKEFM 1065


>sp|O45244|DHX16_CAEEL Probable pre-mRNA-splicing factor ATP-dependent
            RNA helicase mog-4 OS=Caenorhabditis elegans GN=mog-4
            PE=2 SV=2
          Length = 1008

 Score =  210 bits (535), Expect = 3e-54
 Identities = 102/187 (54%), Positives = 138/187 (73%)
 Frame = +1

Query: 1    RRMAEFPLDPMLSKMIVASDKFKCSEEIVTIAAMLSVGNSIFYRPKDKQVHADNAKMNFH 180
            RRMAEFP DP +SKMI+AS+K++CSEEIVTIAAMLS   ++FYRPK + +HAD+A+  F 
Sbjct: 779  RRMAEFPCDPCMSKMIIASEKYECSEEIVTIAAMLSCNAAVFYRPKAQVIHADSARKGFW 838

Query: 181  TGNVGDQIALLKVYDTWKETNYSTQWCYENYIQVRSMKRARDIRDQLEGLLDRVXXXXXX 360
            +   GD I L+ VY+ W+E+++S +WC ENY+Q R+MKRARD+RDQL GLL+RV      
Sbjct: 839  S-PAGDHITLMNVYNKWQESSFSQRWCVENYVQHRTMKRARDVRDQLVGLLERV-EIETK 896

Query: 361  XXXXXXAIKKAITSGYFYHTAKLQKNGSYRTIKNPQTVHIHPSSGLAEVLPR*LVYFELI 540
                   I+KAIT+GYFY+ +KL   G Y+T+K+  T H HP+S L E  PR +VYFEL+
Sbjct: 897  SSTDTIKIRKAITAGYFYNVSKLDNTGHYKTVKHKHTTHPHPNSCLFEETPRWVVYFELV 956

Query: 541  ITTKEYL 561
             T+KE++
Sbjct: 957  FTSKEFM 963


>sp|Q10752|CDC28_SCHPO Pre-mRNA-splicing factor ATP-dependent RNA
            helicase-like protein cdc28 OS=Schizosaccharomyces pombe
            GN=cdc28 PE=2 SV=2
          Length = 1055

 Score =  189 bits (481), Expect = 6e-48
 Identities = 95/188 (50%), Positives = 134/188 (71%), Gaps = 2/188 (1%)
 Frame = +1

Query: 1    RRMAEFPLDPMLSKMIVASDKFKCSEEIVTIAAMLSVGNSIFYRPKDKQVHADNAKMNFH 180
            R+MAEFP DPMLSK ++AS K+ C EE+++I +ML   +S+FYRPKDK + AD A+ NF 
Sbjct: 832  RQMAEFPTDPMLSKSLIASSKYGCVEEVLSIVSMLGEASSLFYRPKDKIMEADKARANF- 890

Query: 181  TGNVGDQIALLKVYDTWKETNYSTQWCYENYIQVRSMKRARDIRDQLEGLLDRV-XXXXX 357
            T   GD + LL +++ W +T++S  W  EN++Q +S+ RARD+RDQL  L +RV      
Sbjct: 891  TQPGGDHLTLLHIWNEWVDTDFSYNWARENFLQYKSLCRARDVRDQLANLCERVEIELVT 950

Query: 358  XXXXXXXAIKKAITSGYFYHTAKLQKNG-SYRTIKNPQTVHIHPSSGLAEVLPR*LVYFE 534
                    IKKAIT+GYF + A+L ++G SYRT+K+ QTV+IHPSS +AE  P+ ++YFE
Sbjct: 951  NSSESLDPIKKAITAGYFSNAARLDRSGDSYRTVKSNQTVYIHPSSSVAEKKPKVIIYFE 1010

Query: 535  LIITTKEY 558
            L++TTKEY
Sbjct: 1011 LVLTTKEY 1018


>sp|Q09530|MOG5_CAEEL Probable pre-mRNA-splicing factor ATP-dependent
            RNA helicase mog-5 OS=Caenorhabditis elegans GN=mog-5
            PE=2 SV=1
          Length = 1200

 Score =  188 bits (477), Expect = 2e-47
 Identities = 96/187 (51%), Positives = 126/187 (67%)
 Frame = +1

Query: 1    RRMAEFPLDPMLSKMIVASDKFKCSEEIVTIAAMLSVGNSIFYRPKDKQVHADNAKMNFH 180
            RRMAEFPL+P LSK+++ S    CSEE++TI AML+V N IFYRPK+KQ HAD  K  FH
Sbjct: 953  RRMAEFPLEPSLSKLLIMSVDLGCSEEVLTIVAMLNVQN-IFYRPKEKQDHADQKKAKFH 1011

Query: 181  TGNVGDQIALLKVYDTWKETNYSTQWCYENYIQVRSMKRARDIRDQLEGLLDRVXXXXXX 360
                GD + LL VY++WK  ++S  WC+EN+IQVRSMKRA+DIR QL G++DR       
Sbjct: 1012 QPE-GDHLTLLAVYNSWKNHHFSQPWCFENFIQVRSMKRAQDIRKQLLGIMDRHKLLMVS 1070

Query: 361  XXXXXXAIKKAITSGYFYHTAKLQKNGSYRTIKNPQTVHIHPSSGLAEVLPR*LVYFELI 540
                   ++KAI SG+F + AK      YRT+ + Q V+IHPSS   +  P  +VY EL+
Sbjct: 1071 CGRDVSRVQKAICSGFFRNAAKRDPQEGYRTLTDGQNVYIHPSSACFQQQPEWVVYHELV 1130

Query: 541  ITTKEYL 561
            +TTKEY+
Sbjct: 1131 MTTKEYM 1137


>sp|A2A4P0|DHX8_MOUSE ATP-dependent RNA helicase DHX8 OS=Mus musculus
            GN=Dhx8 PE=2 SV=1
          Length = 1244

 Score =  185 bits (470), Expect = 1e-46
 Identities = 94/187 (50%), Positives = 123/187 (65%)
 Frame = +1

Query: 1    RRMAEFPLDPMLSKMIVASDKFKCSEEIVTIAAMLSVGNSIFYRPKDKQVHADNAKMNFH 180
            RRMAEFPL+PML KM++ S    CSEE++TI +MLSV N +FYRPKDKQ  AD  K  FH
Sbjct: 1002 RRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQN-VFYRPKDKQALADQKKAKFH 1060

Query: 181  TGNVGDQIALLKVYDTWKETNYSTQWCYENYIQVRSMKRARDIRDQLEGLLDRVXXXXXX 360
                GD + LL VY++WK   +S  WCYEN+IQ RS++RA+DIR Q+ G++DR       
Sbjct: 1061 QTE-GDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVS 1119

Query: 361  XXXXXXAIKKAITSGYFYHTAKLQKNGSYRTIKNPQTVHIHPSSGLAEVLPR*LVYFELI 540
                   ++KAI SG+F + AK      YRT+ + Q V+IHPSS L    P  +VY EL+
Sbjct: 1120 CGKSTVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNRQPEWVVYHELV 1179

Query: 541  ITTKEYL 561
            +TTKEY+
Sbjct: 1180 LTTKEYM 1186


>sp|Q14562|DHX8_HUMAN ATP-dependent RNA helicase DHX8 OS=Homo sapiens
            GN=DHX8 PE=1 SV=1
          Length = 1220

 Score =  185 bits (470), Expect = 1e-46
 Identities = 94/187 (50%), Positives = 123/187 (65%)
 Frame = +1

Query: 1    RRMAEFPLDPMLSKMIVASDKFKCSEEIVTIAAMLSVGNSIFYRPKDKQVHADNAKMNFH 180
            RRMAEFPL+PML KM++ S    CSEE++TI +MLSV N +FYRPKDKQ  AD  K  FH
Sbjct: 978  RRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQN-VFYRPKDKQALADQKKAKFH 1036

Query: 181  TGNVGDQIALLKVYDTWKETNYSTQWCYENYIQVRSMKRARDIRDQLEGLLDRVXXXXXX 360
                GD + LL VY++WK   +S  WCYEN+IQ RS++RA+DIR Q+ G++DR       
Sbjct: 1037 QTE-GDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVS 1095

Query: 361  XXXXXXAIKKAITSGYFYHTAKLQKNGSYRTIKNPQTVHIHPSSGLAEVLPR*LVYFELI 540
                   ++KAI SG+F + AK      YRT+ + Q V+IHPSS L    P  +VY EL+
Sbjct: 1096 CGKSTVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNRQPEWVVYHELV 1155

Query: 541  ITTKEYL 561
            +TTKEY+
Sbjct: 1156 LTTKEYM 1162


>sp|Q54F05|DHX8_DICDI ATP-dependent RNA helicase dhx8 OS=Dictyostelium
            discoideum GN=dhx8 PE=3 SV=1
          Length = 1160

 Score =  177 bits (450), Expect = 2e-44
 Identities = 89/187 (47%), Positives = 123/187 (65%)
 Frame = +1

Query: 1    RRMAEFPLDPMLSKMIVASDKFKCSEEIVTIAAMLSVGNSIFYRPKDKQVHADNAKMNFH 180
            R+MAEFPLDP LSKM++AS    CS+EI+T+ AMLSV N +FYRPK+KQ  AD  K  F 
Sbjct: 921  RKMAEFPLDPQLSKMLIASVDLGCSDEILTVVAMLSVQN-VFYRPKEKQALADQKKAKFF 979

Query: 181  TGNVGDQIALLKVYDTWKETNYSTQWCYENYIQVRSMKRARDIRDQLEGLLDRVXXXXXX 360
                GD + LL VY++WK + +S  WC+EN++Q RS++RA+D+R QL  ++DR       
Sbjct: 980  QPE-GDHLTLLNVYESWKNSKFSNPWCFENFVQARSLRRAQDVRKQLITIMDRYKLDIIS 1038

Query: 361  XXXXXXAIKKAITSGYFYHTAKLQKNGSYRTIKNPQTVHIHPSSGLAEVLPR*LVYFELI 540
                   I+KAI SG+F + +K   N  Y+T+   Q V+IHPSS L    P  ++Y EL+
Sbjct: 1039 AGRNYTKIQKAICSGFFANASKKDPNEGYKTLVEGQPVYIHPSSTLFNRNPDWVIYHELV 1098

Query: 541  ITTKEYL 561
            +TTKEY+
Sbjct: 1099 MTTKEYM 1105


>sp|Q38953|DHX8_ARATH Probable pre-mRNA-splicing factor ATP-dependent
            RNA helicase OS=Arabidopsis thaliana GN=At3g26560 PE=2
            SV=2
          Length = 1168

 Score =  176 bits (445), Expect = 9e-44
 Identities = 86/187 (45%), Positives = 123/187 (65%)
 Frame = +1

Query: 1    RRMAEFPLDPMLSKMIVASDKFKCSEEIVTIAAMLSVGNSIFYRPKDKQVHADNAKMNFH 180
            R+MAEFPL+P LSKM++AS    CS+EI+T+ AM+  GN IFYRP++KQ  AD  +  F 
Sbjct: 928  RKMAEFPLEPPLSKMLLASVDLGCSDEILTMIAMIQTGN-IFYRPREKQAQADQKRAKFF 986

Query: 181  TGNVGDQIALLKVYDTWKETNYSTQWCYENYIQVRSMKRARDIRDQLEGLLDRVXXXXXX 360
                GD + LL VY+ WK  N+S  WC+EN+IQ RS++RA+D+R QL  ++D+       
Sbjct: 987  QPE-GDHLTLLAVYEAWKAKNFSGPWCFENFIQSRSLRRAQDVRKQLLSIMDKYKLDVVT 1045

Query: 361  XXXXXXAIKKAITSGYFYHTAKLQKNGSYRTIKNPQTVHIHPSSGLAEVLPR*LVYFELI 540
                   I+KAIT+G+F+H A+      YRT+   Q V+IHPSS L +  P  ++Y +L+
Sbjct: 1046 AGKNFTKIRKAITAGFFFHGARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHDLV 1105

Query: 541  ITTKEYL 561
            +TTKEY+
Sbjct: 1106 MTTKEYM 1112
tr_hit_id A9S2C1
Definition tr|A9S2C1|A9S2C1_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 187
Score (bit) 313.0
E-value 3.0e-84
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP911479|Adiantum capillus-veneris mRNA, clone:
YMU001_000005_D10.
         (561 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9S2C1|A9S2C1_PHYPA Predicted protein OS=Physcomitrella paten...   313   3e-84
tr|A7PDE9|A7PDE9_VITVI Chromosome chr17 scaffold_12, whole genom...   311   2e-83
tr|Q9LQK8|Q9LQK8_ARATH F5D14.27 protein OS=Arabidopsis thaliana ...   303   4e-81
tr|Q8VY00|Q8VY00_ARATH Putative RNA helicase OS=Arabidopsis thal...   303   4e-81
tr|O82303|O82303_ARATH Putative pre-mRNA splicing factor RNA hel...   296   5e-79
tr|Q0WVI8|Q0WVI8_ARATH Putative pre-mRNA splicing factor RNA hel...   292   1e-77
tr|Q0J6C6|Q0J6C6_ORYSJ Os08g0335000 protein OS=Oryza sativa subs...   282   1e-74
tr|B8B9U1|B8B9U1_ORYSI Putative uncharacterized protein OS=Oryza...   282   1e-74
tr|Q6YUI7|Q6YUI7_ORYSJ RNA helicase-like (Putative uncharacteriz...   270   4e-71
tr|A4SAP7|A4SAP7_OSTLU Predicted protein OS=Ostreococcus lucimar...   255   1e-66
tr|O23511|O23511_ARATH RNA helicase OS=Arabidopsis thaliana GN=d...   248   1e-64
tr|Q4S9E8|Q4S9E8_TETNG Chromosome undetermined SCAF14699, whole ...   245   1e-63
tr|Q7ZVV8|Q7ZVV8_DANRE DEAH (Asp-Glu-Ala-His) box polypeptide 16...   244   2e-63
tr|B7PNN0|B7PNN0_IXOSC ATP-dependent RNA helicase, putative (Fra...   243   4e-63
tr|Q16S17|Q16S17_AEDAE ATP-dependent RNA helicase OS=Aedes aegyp...   242   9e-63
tr|Q9CRI3|Q9CRI3_MOUSE Putative uncharacterized protein (Fragmen...   239   6e-62
tr|Q921Y1|Q921Y1_MOUSE DEAH (Asp-Glu-Ala-His) box polypeptide 16...   239   6e-62
tr|Q6MG13|Q6MG13_RAT DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptid...   239   6e-62
tr|Q6I5X9|Q6I5X9_ORYSJ Os05g0389800 protein OS=Oryza sativa subs...   239   8e-62
tr|B4N190|B4N190_DROWI GK24234 OS=Drosophila willistoni GN=GK242...   239   1e-61
tr|Q80TX4|Q80TX4_MOUSE MKIAA0577 protein (Fragment) OS=Mus muscu...   238   1e-61
tr|Q767K6|Q767K6_PIG DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptid...   238   1e-61
tr|Q5TM65|Q5TM65_MACMU DEAH (Asp-Glu-Ala-His) box polypeptide 16...   238   1e-61
tr|Q9P186|Q9P186_HUMAN PRO2014 OS=Homo sapiens PE=2 SV=1              238   1e-61
tr|Q5SQH5|Q5SQH5_HUMAN DEAD/H (Asp-Glu-Ala-Asp/His) box polypept...   238   1e-61
tr|Q5SQH4|Q5SQH4_HUMAN DEAD/H (Asp-Glu-Ala-Asp/His) box polypept...   238   1e-61
tr|Q5JP46|Q5JP46_HUMAN DEAH (Asp-Glu-Ala-His) box polypeptide 16...   238   1e-61
tr|Q5JP45|Q5JP45_HUMAN DEAH (Asp-Glu-Ala-His) box polypeptide 16...   238   1e-61
tr|B3MNP1|B3MNP1_DROAN GF15208 OS=Drosophila ananassae GN=GF1520...   238   2e-61
tr|Q9VIZ3|Q9VIZ3_DROME Lethal (2) 37Cb OS=Drosophila melanogaste...   237   3e-61

>tr|A9S2C1|A9S2C1_PHYPA Predicted protein OS=Physcomitrella patens
            subsp. patens GN=PHYPADRAFT_180557 PE=4 SV=1
          Length = 1045

 Score =  313 bits (803), Expect = 3e-84
 Identities = 149/187 (79%), Positives = 167/187 (89%)
 Frame = +1

Query: 1    RRMAEFPLDPMLSKMIVASDKFKCSEEIVTIAAMLSVGNSIFYRPKDKQVHADNAKMNFH 180
            RRMAEFP+DPMLSKM+VASD +KCSEE+VTI AMLS+GNSIFYRPKDKQVHADNA+MNFH
Sbjct: 817  RRMAEFPMDPMLSKMLVASDNYKCSEEVVTICAMLSIGNSIFYRPKDKQVHADNARMNFH 876

Query: 181  TGNVGDQIALLKVYDTWKETNYSTQWCYENYIQVRSMKRARDIRDQLEGLLDRVXXXXXX 360
             GNVGD IALLKVYD+WKETNYSTQWCYENYIQVRSMKRARDIRDQLEGLL+RV      
Sbjct: 877  AGNVGDHIALLKVYDSWKETNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIESSS 936

Query: 361  XXXXXXAIKKAITSGYFYHTAKLQKNGSYRTIKNPQTVHIHPSSGLAEVLPR*LVYFELI 540
                   I+KAITSG+FYHTAKLQKNG+YRT+KNPQTV IHPSSGL++VLPR +VY EL+
Sbjct: 937  NPNELDNIRKAITSGFFYHTAKLQKNGTYRTVKNPQTVSIHPSSGLSQVLPRWVVYHELV 996

Query: 541  ITTKEYL 561
            +TTKEY+
Sbjct: 997  MTTKEYM 1003


>tr|A7PDE9|A7PDE9_VITVI Chromosome chr17 scaffold_12, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00016254001
           PE=4 SV=1
          Length = 641

 Score =  311 bits (796), Expect = 2e-83
 Identities = 147/187 (78%), Positives = 169/187 (90%)
 Frame = +1

Query: 1   RRMAEFPLDPMLSKMIVASDKFKCSEEIVTIAAMLSVGNSIFYRPKDKQVHADNAKMNFH 180
           RRMAEFPLDPMLSKMIVA+D +KCS+EI++IAAMLSVGNSIFYRPKDKQVHADNA+MNFH
Sbjct: 413 RRMAEFPLDPMLSKMIVAADNYKCSDEIISIAAMLSVGNSIFYRPKDKQVHADNARMNFH 472

Query: 181 TGNVGDQIALLKVYDTWKETNYSTQWCYENYIQVRSMKRARDIRDQLEGLLDRVXXXXXX 360
           TGNVGD IALLKVY +WKETNYSTQWCYENYIQVRSMKRARD+RDQLEGLL+RV      
Sbjct: 473 TGNVGDHIALLKVYSSWKETNYSTQWCYENYIQVRSMKRARDVRDQLEGLLERVEIELAS 532

Query: 361 XXXXXXAIKKAITSGYFYHTAKLQKNGSYRTIKNPQTVHIHPSSGLAEVLPR*LVYFELI 540
                 AIKK+IT+G+F H+A+LQKNGSYRT+K+PQTVHIHPSSGLA+VLPR ++Y EL+
Sbjct: 533 NPNDLDAIKKSITAGFFPHSARLQKNGSYRTVKHPQTVHIHPSSGLAQVLPRWVIYHELV 592

Query: 541 ITTKEYL 561
           +TTKEY+
Sbjct: 593 LTTKEYM 599


>tr|Q9LQK8|Q9LQK8_ARATH F5D14.27 protein OS=Arabidopsis thaliana
            GN=F5D14.27 PE=4 SV=1
          Length = 1090

 Score =  303 bits (776), Expect = 4e-81
 Identities = 142/187 (75%), Positives = 167/187 (89%)
 Frame = +1

Query: 1    RRMAEFPLDPMLSKMIVASDKFKCSEEIVTIAAMLSVGNSIFYRPKDKQVHADNAKMNFH 180
            RRMAEFPLDPMLSKMIV SDK+KCS+EI++IAAMLS+G SIFYRPKDKQVHADNA+MNFH
Sbjct: 849  RRMAEFPLDPMLSKMIVVSDKYKCSDEIISIAAMLSIGGSIFYRPKDKQVHADNARMNFH 908

Query: 181  TGNVGDQIALLKVYDTWKETNYSTQWCYENYIQVRSMKRARDIRDQLEGLLDRVXXXXXX 360
            TGNVGD IALLKVY +WKETN+STQWCYENYIQVRSMKRARDIRDQLEGLL+RV      
Sbjct: 909  TGNVGDHIALLKVYSSWKETNFSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIDISS 968

Query: 361  XXXXXXAIKKAITSGYFYHTAKLQKNGSYRTIKNPQTVHIHPSSGLAEVLPR*LVYFELI 540
                  +++K+I +G+F HTAKLQKNGSYRT+K+PQTVHIHP+SGL++VLPR +VY EL+
Sbjct: 969  NLNELDSVRKSIVAGFFPHTAKLQKNGSYRTVKHPQTVHIHPNSGLSQVLPRWVVYHELV 1028

Query: 541  ITTKEYL 561
            +T+KEY+
Sbjct: 1029 LTSKEYM 1035


>tr|Q8VY00|Q8VY00_ARATH Putative RNA helicase OS=Arabidopsis thaliana
            GN=At1g32490 PE=1 SV=1
          Length = 1044

 Score =  303 bits (776), Expect = 4e-81
 Identities = 142/187 (75%), Positives = 167/187 (89%)
 Frame = +1

Query: 1    RRMAEFPLDPMLSKMIVASDKFKCSEEIVTIAAMLSVGNSIFYRPKDKQVHADNAKMNFH 180
            RRMAEFPLDPMLSKMIV SDK+KCS+EI++IAAMLS+G SIFYRPKDKQVHADNA+MNFH
Sbjct: 817  RRMAEFPLDPMLSKMIVVSDKYKCSDEIISIAAMLSIGGSIFYRPKDKQVHADNARMNFH 876

Query: 181  TGNVGDQIALLKVYDTWKETNYSTQWCYENYIQVRSMKRARDIRDQLEGLLDRVXXXXXX 360
            TGNVGD IALLKVY +WKETN+STQWCYENYIQVRSMKRARDIRDQLEGLL+RV      
Sbjct: 877  TGNVGDHIALLKVYSSWKETNFSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIDISS 936

Query: 361  XXXXXXAIKKAITSGYFYHTAKLQKNGSYRTIKNPQTVHIHPSSGLAEVLPR*LVYFELI 540
                  +++K+I +G+F HTAKLQKNGSYRT+K+PQTVHIHP+SGL++VLPR +VY EL+
Sbjct: 937  NLNELDSVRKSIVAGFFPHTAKLQKNGSYRTVKHPQTVHIHPNSGLSQVLPRWVVYHELV 996

Query: 541  ITTKEYL 561
            +T+KEY+
Sbjct: 997  LTSKEYM 1003


>tr|O82303|O82303_ARATH Putative pre-mRNA splicing factor RNA helicase
            OS=Arabidopsis thaliana GN=At2g35340 PE=1 SV=1
          Length = 1087

 Score =  296 bits (758), Expect = 5e-79
 Identities = 139/187 (74%), Positives = 164/187 (87%)
 Frame = +1

Query: 1    RRMAEFPLDPMLSKMIVASDKFKCSEEIVTIAAMLSVGNSIFYRPKDKQVHADNAKMNFH 180
            RRMAEFPLDPMLSKMIV SDK+KCS+EI++IAAMLS+G SIFYRPKDKQVHADNA  NFH
Sbjct: 860  RRMAEFPLDPMLSKMIVVSDKYKCSDEIISIAAMLSIGPSIFYRPKDKQVHADNAMKNFH 919

Query: 181  TGNVGDQIALLKVYDTWKETNYSTQWCYENYIQVRSMKRARDIRDQLEGLLDRVXXXXXX 360
             GNVGD IA LK+Y++WKETNYSTQWCYENYIQVRSMKRARDIRDQLEGLL+RV      
Sbjct: 920  VGNVGDHIAFLKIYNSWKETNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIDVSS 979

Query: 361  XXXXXXAIKKAITSGYFYHTAKLQKNGSYRTIKNPQTVHIHPSSGLAEVLPR*LVYFELI 540
                  +I+K+I +G+F HTAKLQKNGSYRT+K+PQTVHIHP+SGL++VLPR +VY +L+
Sbjct: 980  NANELDSIRKSIVAGFFPHTAKLQKNGSYRTVKHPQTVHIHPASGLSQVLPRWVVYHQLV 1039

Query: 541  ITTKEYL 561
            +T+KEY+
Sbjct: 1040 LTSKEYM 1046


>tr|Q0WVI8|Q0WVI8_ARATH Putative pre-mRNA splicing factor RNA helicase
            OS=Arabidopsis thaliana GN=At2g35340 PE=2 SV=1
          Length = 1044

 Score =  292 bits (747), Expect = 1e-77
 Identities = 138/187 (73%), Positives = 163/187 (87%)
 Frame = +1

Query: 1    RRMAEFPLDPMLSKMIVASDKFKCSEEIVTIAAMLSVGNSIFYRPKDKQVHADNAKMNFH 180
            RRMAEFPLDPMLSKMIV SDK+KCS+EI++IAAMLS+G SIFYRPKDKQVHADNA  NFH
Sbjct: 817  RRMAEFPLDPMLSKMIVVSDKYKCSDEIISIAAMLSIGPSIFYRPKDKQVHADNAMKNFH 876

Query: 181  TGNVGDQIALLKVYDTWKETNYSTQWCYENYIQVRSMKRARDIRDQLEGLLDRVXXXXXX 360
             GNVGD IA LK+Y++WKETNYSTQWCYENYIQVRSMKRARDIRDQLEGLL+RV      
Sbjct: 877  VGNVGDHIAFLKIYNSWKETNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIDVSS 936

Query: 361  XXXXXXAIKKAITSGYFYHTAKLQKNGSYRTIKNPQTVHIHPSSGLAEVLPR*LVYFELI 540
                  +I+K+I +G+F  TAKLQKNGSYRT+K+PQTVHIHP+SGL++VLPR +VY +L+
Sbjct: 937  NANELDSIRKSIVAGFFPLTAKLQKNGSYRTVKHPQTVHIHPASGLSQVLPRWVVYHQLV 996

Query: 541  ITTKEYL 561
            +T+KEY+
Sbjct: 997  LTSKEYM 1003


>tr|Q0J6C6|Q0J6C6_ORYSJ Os08g0335000 protein OS=Oryza sativa subsp.
            japonica GN=Os08g0335000 PE=4 SV=1
          Length = 1130

 Score =  282 bits (721), Expect = 1e-74
 Identities = 136/187 (72%), Positives = 160/187 (85%)
 Frame = +1

Query: 1    RRMAEFPLDPMLSKMIVASDKFKCSEEIVTIAAMLSVGNSIFYRPKDKQVHADNAKMNFH 180
            RRMAEFPLDPMLSKMIVAS+K+KCS+E+++IA+MLSVGNSIFYRPKDKQVHADNA++NFH
Sbjct: 830  RRMAEFPLDPMLSKMIVASEKYKCSDEVISIASMLSVGNSIFYRPKDKQVHADNARLNFH 889

Query: 181  TGNVGDQIALLKVYDTWKETNYSTQWCYENYIQVRSMKRARDIRDQLEGLLDRVXXXXXX 360
            TGNVGD IALL VY++WKET+YSTQWCYENYIQVRSMKRARDIRDQLEGLL+RV      
Sbjct: 890  TGNVGDHIALLNVYNSWKETDYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIEISS 949

Query: 361  XXXXXXAIKKAITSGYFYHTAKLQKNGSYRTIKNPQTVHIHPSSGLAEVLPR*LVYFELI 540
                  AIKKAITSG+F+H+++LQKNGSYRT+KNPQT           VLPR ++Y EL+
Sbjct: 950  NASDLDAIKKAITSGFFHHSSRLQKNGSYRTVKNPQT-----------VLPRWVIYHELV 998

Query: 541  ITTKEYL 561
            +TTKEY+
Sbjct: 999  LTTKEYM 1005


>tr|B8B9U1|B8B9U1_ORYSI Putative uncharacterized protein OS=Oryza
            sativa subsp. indica GN=OsI_28838 PE=4 SV=1
          Length = 1046

 Score =  282 bits (721), Expect = 1e-74
 Identities = 136/187 (72%), Positives = 160/187 (85%)
 Frame = +1

Query: 1    RRMAEFPLDPMLSKMIVASDKFKCSEEIVTIAAMLSVGNSIFYRPKDKQVHADNAKMNFH 180
            RRMAEFPLDPMLSKMIVAS+K+KCS+E+++IA+MLSVGNSIFYRPKDKQVHADNA++NFH
Sbjct: 830  RRMAEFPLDPMLSKMIVASEKYKCSDEVISIASMLSVGNSIFYRPKDKQVHADNARLNFH 889

Query: 181  TGNVGDQIALLKVYDTWKETNYSTQWCYENYIQVRSMKRARDIRDQLEGLLDRVXXXXXX 360
            TGNVGD IALL VY++WKET+YSTQWCYENYIQVRSMKRARDIRDQLEGLL+RV      
Sbjct: 890  TGNVGDHIALLNVYNSWKETDYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIEISS 949

Query: 361  XXXXXXAIKKAITSGYFYHTAKLQKNGSYRTIKNPQTVHIHPSSGLAEVLPR*LVYFELI 540
                  AIKKAITSG+F+H+++LQKNGSYRT+KNPQT           VLPR ++Y EL+
Sbjct: 950  NASDLDAIKKAITSGFFHHSSRLQKNGSYRTVKNPQT-----------VLPRWVIYHELV 998

Query: 541  ITTKEYL 561
            +TTKEY+
Sbjct: 999  LTTKEYM 1005


>tr|Q6YUI7|Q6YUI7_ORYSJ RNA helicase-like (Putative uncharacterized
            protein) OS=Oryza sativa subsp. japonica
            GN=OSJNBb0076O03.29 PE=4 SV=1
          Length = 1066

 Score =  270 bits (690), Expect = 4e-71
 Identities = 136/207 (65%), Positives = 160/207 (77%), Gaps = 20/207 (9%)
 Frame = +1

Query: 1    RRMAEFPLDPMLSKMIVASDKFKCSEEIVTIAAMLSVGNSIFYRPKDKQVHADNAKMNFH 180
            RRMAEFPLDPMLSKMIVAS+K+KCS+E+++IA+MLSVGNSIFYRPKDKQVHADNA++NFH
Sbjct: 830  RRMAEFPLDPMLSKMIVASEKYKCSDEVISIASMLSVGNSIFYRPKDKQVHADNARLNFH 889

Query: 181  TGNVGDQIALLKVYDTWKETNYSTQWCYENYIQ--------------------VRSMKRA 300
            TGNVGD IALL VY++WKET+YSTQWCYENYIQ                    VRSMKRA
Sbjct: 890  TGNVGDHIALLNVYNSWKETDYSTQWCYENYIQSPNGKYQLFEGCQLQNIVILVRSMKRA 949

Query: 301  RDIRDQLEGLLDRVXXXXXXXXXXXXAIKKAITSGYFYHTAKLQKNGSYRTIKNPQTVHI 480
            RDIRDQLEGLL+RV            AIKKAITSG+F+H+++LQKNGSYRT+KNPQT   
Sbjct: 950  RDIRDQLEGLLERVEIEISSNASDLDAIKKAITSGFFHHSSRLQKNGSYRTVKNPQT--- 1006

Query: 481  HPSSGLAEVLPR*LVYFELIITTKEYL 561
                    VLPR ++Y EL++TTKEY+
Sbjct: 1007 --------VLPRWVIYHELVLTTKEYM 1025


>tr|A4SAP7|A4SAP7_OSTLU Predicted protein OS=Ostreococcus lucimarinus
            (strain CCE9901) GN=OSTLU_18937 PE=4 SV=1
          Length = 873

 Score =  255 bits (651), Expect = 1e-66
 Identities = 121/187 (64%), Positives = 149/187 (79%)
 Frame = +1

Query: 1    RRMAEFPLDPMLSKMIVASDKFKCSEEIVTIAAMLSVGNSIFYRPKDKQVHADNAKMNFH 180
            R+MAEFPLDPMLSK + ASDK+K S+E++TI  MLS GN++FYRPKDK   AD+A  +FH
Sbjct: 642  RKMAEFPLDPMLSKTLCASDKYKVSDEVMTICCMLSCGNTVFYRPKDKLQLADHAHKSFH 701

Query: 181  TGNVGDQIALLKVYDTWKETNYSTQWCYENYIQVRSMKRARDIRDQLEGLLDRVXXXXXX 360
             GNVGD IALL VY++W++ ++S  WCYEN++Q R+MK ARDIR+QLE LL+RV      
Sbjct: 702  IGNVGDHIALLNVYNSWRDADFSVTWCYENFVQQRTMKTARDIREQLEKLLERVEIEPSS 761

Query: 361  XXXXXXAIKKAITSGYFYHTAKLQKNGSYRTIKNPQTVHIHPSSGLAEVLPR*LVYFELI 540
                   IKK ITSG+FYHTAKLQKNGSYRT+KNPQTV IHPSSGLA+ LPR +VYFEL+
Sbjct: 762  NTNDLDGIKKCITSGFFYHTAKLQKNGSYRTVKNPQTVAIHPSSGLAKELPRWVVYFELV 821

Query: 541  ITTKEYL 561
             T+KEY+
Sbjct: 822  YTSKEYM 828