BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP911484|Adiantum capillus-veneris mRNA, clone:
YMU001_000005_E03.
         (453 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8LAW2|AFR_ARATH Protein AFR OS=Arabidopsis thaliana GN=AFR P...    33   0.76 
sp|O60609|GFRA3_HUMAN GDNF family receptor alpha-3 OS=Homo sapie...    31   2.2  
sp|Q9NR96|TLR9_HUMAN Toll-like receptor 9 OS=Homo sapiens GN=TLR...    31   2.2  
sp|Q5I2M8|TLR9_CANFA Toll-like receptor 9 OS=Canis familiaris GN...    30   4.9  

>sp|Q8LAW2|AFR_ARATH Protein AFR OS=Arabidopsis thaliana GN=AFR PE=1
           SV=2
          Length = 372

 Score = 32.7 bits (73), Expect = 0.76
 Identities = 18/62 (29%), Positives = 30/62 (48%)
 Frame = +1

Query: 163 EECLGQGWGRPYLFLGYP*LGMQYDDNEGFCRHQCVTRKRGSTCFHSYTSAVRSGIWMLV 342
           E C+ +GW  P++F   P +G  YD +EG  R      K G T     +  +R  ++++ 
Sbjct: 228 EMCVTEGWAWPFMF---PPMGQVYDSDEGTWREMSGGMKEGWT---GVSVVIRDRLFVIS 281

Query: 343 TH 348
            H
Sbjct: 282 EH 283


>sp|O60609|GFRA3_HUMAN GDNF family receptor alpha-3 OS=Homo sapiens
           GN=GFRA3 PE=1 SV=2
          Length = 400

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = -3

Query: 328 CLSALLRCTNGNMCFLFSVSHTDACRSPHCRHTAC 224
           CL   + CT  + C     ++ +AC  PHC+   C
Sbjct: 162 CLKFAMLCTLNDKCDRLRKAYGEACSGPHCQRHVC 196


>sp|Q9NR96|TLR9_HUMAN Toll-like receptor 9 OS=Homo sapiens GN=TLR9
           PE=1 SV=2
          Length = 1032

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 14/44 (31%), Positives = 21/44 (47%)
 Frame = -1

Query: 279 FPCHTLMPAEALIVVILHAKSRVSQKQIRATPTLPKAFLSLLIS 148
           FPCH  +     + V    +  +S   I   P LPK+ +SL +S
Sbjct: 108 FPCHMTIEPSTFLAVPTLEELNLSYNNIMTVPALPKSLISLSLS 151


>sp|Q5I2M8|TLR9_CANFA Toll-like receptor 9 OS=Canis familiaris
           GN=TLR9 PE=2 SV=1
          Length = 1032

 Score = 30.0 bits (66), Expect = 4.9
 Identities = 17/67 (25%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
 Frame = -1

Query: 279 FPCHTLMPAEALIVVILHAKSRVSQKQIRATPTLPKAFLSLLIS---CIVYKVSTFRDVF 109
           FPCH  +     + V       +S   I   P LP + +SL +S    +V   +T   ++
Sbjct: 108 FPCHMTIEPNTFLAVPTLEDLNLSYNSITTVPALPSSLVSLSLSRTNILVLDPATLAGLY 167

Query: 108 LILFVLL 88
            + F+ L
Sbjct: 168 ALRFLFL 174

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP911484|Adiantum capillus-veneris mRNA, clone:
YMU001_000005_E03.
         (453 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A5BJ89|A5BJ89_VITVI Putative uncharacterized protein OS=Vitis...    34   3.2  
tr|Q8ECU4|Q8ECU4_SHEON Putative uncharacterized protein OS=Shewa...    33   5.4  
tr|Q56R09|Q56R09_AOTNA Toll-like receptor 9 OS=Aotus nancymaae P...    33   9.3  

>tr|A5BJ89|A5BJ89_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_025599 PE=4 SV=1
          Length = 275

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 15/41 (36%), Positives = 25/41 (60%)
 Frame = -1

Query: 258 PAEALIVVILHAKSRVSQKQIRATPTLPKAFLSLLISCIVY 136
           P   ++VV+LH + +V +K ++ T T+P  FL LL   + Y
Sbjct: 61  PHHLIMVVLLHFEEKVHRKNLQKTDTIPLLFLRLLYHILEY 101


>tr|Q8ECU4|Q8ECU4_SHEON Putative uncharacterized protein
           OS=Shewanella oneidensis GN=SO_3029 PE=4 SV=1
          Length = 94

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 23/57 (40%), Positives = 29/57 (50%), Gaps = 9/57 (15%)
 Frame = -1

Query: 228 HAKSRVSQKQIRATPTLPKA--------FLSLLISCIVYKVSTFRDV-FLILFVLLW 85
           H+ S  + + I  TP LP          FLS+L+SCIV  +STF  V     FV LW
Sbjct: 5   HSASNNNSRTIFGTPKLPAKYATIVMPFFLSILMSCIVSGISTFNGVGTSAQFVELW 61


>tr|Q56R09|Q56R09_AOTNA Toll-like receptor 9 OS=Aotus nancymaae PE=2
           SV=1
          Length = 1032

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 15/44 (34%), Positives = 22/44 (50%)
 Frame = -1

Query: 279 FPCHTLMPAEALIVVILHAKSRVSQKQIRATPTLPKAFLSLLIS 148
           FPCH  +     + V    +  +S   I A P LPK+ +SL +S
Sbjct: 108 FPCHMTIEPNTFLAVPTLEELNLSYNSITAVPALPKSLVSLTLS 151