NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | ダウンロード | 利用許諾 | ヘルプ
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP911499
Clone id YMU001_000005_F10
Library
Length 513
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000005_F10.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
TGCTGCTGGACTAGCCACTGCCAAGGGATGGAAATCTTTGATAGTACCAGGAATTCTTGC
TGGCATTTTTGGTGTTGCAATTGCAACTTTCATTTCAATCTTTTTGGGAGTTACCGTCTT
AAAGTTTTTGTGAAAGTTTTTGTTGGTCTTGAGGCTCATTAACATTAAGCACGTACAAAG
TTACTGTGCTTCTTGAGCTTGACATTTGCCAAAAGGGCTGGTTAAAGTGAGGGAGCTACA
ATTGTTCAGTCAGTCCTTTTATGCCAACTGATATGGCCGTTGATGGATGCTCATCCAAGA
GCATTGATTTAGCAGTATACCATGTCTACTGCTGATGGCGAGGTTAAGTTTGCTTATCAA
AATGCTGTGCATGATGTCTTGAAAAGTTTCAAGCATGATTGTGACGGTCCTCCAGAATGC
GATGTCATTGTATATCGAACAATGGGCCTTGTTTAAGAGGTCTTTTAGTGGTTTATGCCA
TGTGATTGTTTGCTTAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q00164
Definition sp|Q00164|VG11_ICHV1 Uncharacterized gene 11 zinc-binding protein OS=Ictalurid herpesvirus 1
Align length 28
Score (bit) 30.8
E-value 3.6
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP911499|Adiantum capillus-veneris mRNA, clone:
YMU001_000005_F10.
         (495 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q00164|VG11_ICHV1 Uncharacterized gene 11 zinc-binding protei...    31   3.6  
sp|O18750|ENPL_RABIT Endoplasmin (Fragment) OS=Oryctolagus cunic...    31   3.6  

>sp|Q00164|VG11_ICHV1 Uncharacterized gene 11 zinc-binding protein
          OS=Ictalurid herpesvirus 1 GN=11 PE=4 SV=1
          Length = 281

 Score = 30.8 bits (68), Expect = 3.6
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = +1

Query: 1  CCWTSHCQGMEIFDSTRNSCWHFWCCNC 84
          CC+   CQG  +F S R SC H +C  C
Sbjct: 25 CCF---CQGEAVFPSNRASCKHVFCFFC 49


>sp|O18750|ENPL_RABIT Endoplasmin (Fragment) OS=Oryctolagus
           cuniculus GN=HSP90B1 PE=2 SV=1
          Length = 716

 Score = 30.8 bits (68), Expect = 3.6
 Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 11/69 (15%)
 Frame = -1

Query: 495 KQTITWHKPLK-----------DLLNKAHCSIYNDIAFWRTVTIMLETFQDIMHSILISK 349
           ++T+  HK LK           D++ K     YND  FW+   I L   +D  +   ++K
Sbjct: 368 RETLQQHKLLKVIRKKLVRKTLDMIKKIADEKYNDDTFWKGTNIKLGVIEDHSNRTRLAK 427

Query: 348 LNLAISSRH 322
           L    SS H
Sbjct: 428 LLRFQSSHH 436
tr_hit_id Q9LTG3
Definition tr|Q9LTG3|Q9LTG3_ARATH Similarity to unknown protein (Putative uncharacterized protein At5g52540) (Putative uncharacterized protein At5g52540; F6N7.1) OS=Arabidopsis thaliana
Align length 33
Score (bit) 61.6
E-value 2.0e-08
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP911499|Adiantum capillus-veneris mRNA, clone:
YMU001_000005_F10.
         (495 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q9LTG3|Q9LTG3_ARATH Similarity to unknown protein (Putative u...    62   2e-08
tr|A9PB60|A9PB60_POPTR Putative uncharacterized protein OS=Popul...    59   1e-07
tr|A7QG58|A7QG58_VITVI Chromosome undetermined scaffold_91, whol...    59   1e-07
tr|A7QG57|A7QG57_VITVI Chromosome undetermined scaffold_91, whol...    58   3e-07
tr|A5BMV9|A5BMV9_VITVI Putative uncharacterized protein OS=Vitis...    58   3e-07
tr|Q5VS60|Q5VS60_ORYSJ Os06g0107100 protein OS=Oryza sativa subs...    55   2e-06
tr|Q5VS59|Q5VS59_ORYSJ cDNA clone:J013161L13, full insert sequen...    55   2e-06
tr|A9SIN5|A9SIN5_PHYPA Predicted protein (Fragment) OS=Physcomit...    55   2e-06
tr|A3B7L7|A3B7L7_ORYSJ Putative uncharacterized protein OS=Oryza...    55   2e-06
tr|Q9FLW1|Q9FLW1_ARATH Similarity to unknown protein OS=Arabidop...    54   4e-06
tr|Q01BH1|Q01BH1_OSTTA Homology to unknown gene OS=Ostreococcus ...    46   0.001
tr|Q017L0|Q017L0_OSTTA Homology to unknown gene OS=Ostreococcus ...    45   0.002
tr|A4RVI9|A4RVI9_OSTLU Predicted protein OS=Ostreococcus lucimar...    45   0.002
tr|A5V6Z4|A5V6Z4_SPHWW Putative uncharacterized protein OS=Sphin...    44   0.003
tr|A0YAT4|A0YAT4_9GAMM Putative uncharacterized protein OS=marin...    44   0.005
tr|A8IA80|A8IA80_CHLRE Predicted protein (Fragment) OS=Chlamydom...    43   0.009
tr|Q0ANM6|Q0ANM6_MARMM Putative uncharacterized protein OS=Maric...    42   0.016
tr|A0Z8S1|A0Z8S1_9GAMM Putative uncharacterized protein OS=marin...    40   0.046
tr|B7FUA6|B7FUA6_PHATR Predicted protein OS=Phaeodactylum tricor...    40   0.046
tr|B8KQE7|B8KQE7_9GAMM Putative uncharacterized protein OS=gamma...    40   0.060
tr|A3UDF3|A3UDF3_9RHOB Putative uncharacterized protein OS=Ocean...    40   0.060
tr|A4RYK9|A4RYK9_OSTLU Predicted protein OS=Ostreococcus lucimar...    39   0.13 
tr|A7HQK7|A7HQK7_PARL1 Putative uncharacterized protein OS=Parvi...    39   0.17 
tr|Q00T36|Q00T36_OSTTA Homology to unknown gene (Fragment) OS=Os...    38   0.30 
tr|B0G864|B0G864_9FIRM Putative uncharacterized protein OS=Dorea...    37   0.39 
tr|A8SMN5|A8SMN5_9FIRM Putative uncharacterized protein OS=Parvi...    37   0.39 
tr|Q65L67|Q65L67_BACLD Conserved membrane protein YjcL OS=Bacill...    36   0.86 
tr|Q0C1S6|Q0C1S6_HYPNA Putative membrane protein OS=Hyphomonas n...    36   1.1  
tr|B0S035|B0S035_FINM2 Putative uncharacterized protein OS=Fineg...    36   1.1  
tr|B5Y4D7|B5Y4D7_PHATR Predicted protein OS=Phaeodactylum tricor...    35   2.5  

>tr|Q9LTG3|Q9LTG3_ARATH Similarity to unknown protein (Putative
           uncharacterized protein At5g52540) (Putative
           uncharacterized protein At5g52540; F6N7.1)
           OS=Arabidopsis thaliana GN=At5g52540/F6N7.1 PE=2 SV=1
          Length = 461

 Score = 61.6 bits (148), Expect = 2e-08
 Identities = 29/33 (87%), Positives = 31/33 (93%)
 Frame = +2

Query: 2   AAGLATAKGWKSLIVPGILAGIFGVAIATFISI 100
           AAG+ATAKGW SLIVPGILAGIFG+AIATFI I
Sbjct: 419 AAGMATAKGWNSLIVPGILAGIFGIAIATFIGI 451


>tr|A9PB60|A9PB60_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 269

 Score = 58.9 bits (141), Expect = 1e-07
 Identities = 26/33 (78%), Positives = 30/33 (90%)
 Frame = +2

Query: 2   AAGLATAKGWKSLIVPGILAGIFGVAIATFISI 100
           A G+ATAKGW SL+VPGILAGIFG+AIATF+ I
Sbjct: 224 ACGMATAKGWSSLVVPGILAGIFGIAIATFLGI 256


>tr|A7QG58|A7QG58_VITVI Chromosome undetermined scaffold_91, whole
           genome shotgun sequence OS=Vitis vinifera
           GN=GSVIVT00037710001 PE=4 SV=1
          Length = 449

 Score = 58.9 bits (141), Expect = 1e-07
 Identities = 26/33 (78%), Positives = 30/33 (90%)
 Frame = +2

Query: 2   AAGLATAKGWKSLIVPGILAGIFGVAIATFISI 100
           A G+ATAKGW SL+VPGILAGIFG+AIATF+ I
Sbjct: 407 ACGMATAKGWSSLVVPGILAGIFGIAIATFLGI 439


>tr|A7QG57|A7QG57_VITVI Chromosome undetermined scaffold_91, whole
           genome shotgun sequence OS=Vitis vinifera
           GN=GSVIVT00037709001 PE=4 SV=1
          Length = 494

 Score = 57.8 bits (138), Expect = 3e-07
 Identities = 25/33 (75%), Positives = 30/33 (90%)
 Frame = +2

Query: 2   AAGLATAKGWKSLIVPGILAGIFGVAIATFISI 100
           A G+ATAKGW SL+VPGILAGIFG++IATF+ I
Sbjct: 452 ACGMATAKGWSSLVVPGILAGIFGISIATFLGI 484


>tr|A5BMV9|A5BMV9_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_024875 PE=4 SV=1
          Length = 1230

 Score = 57.8 bits (138), Expect = 3e-07
 Identities = 25/33 (75%), Positives = 30/33 (90%)
 Frame = +2

Query: 2   AAGLATAKGWKSLIVPGILAGIFGVAIATFISI 100
           A G+ATAKGW SL+VPGILAGIFG++IATF+ I
Sbjct: 452 ACGMATAKGWSSLVVPGILAGIFGISIATFLGI 484


>tr|Q5VS60|Q5VS60_ORYSJ Os06g0107100 protein OS=Oryza sativa subsp.
           japonica GN=P0644B06.44-2 PE=4 SV=1
          Length = 395

 Score = 55.1 bits (131), Expect = 2e-06
 Identities = 24/33 (72%), Positives = 29/33 (87%)
 Frame = +2

Query: 2   AAGLATAKGWKSLIVPGILAGIFGVAIATFISI 100
           AA +ATAKGW SLIVPGIL G+FG++IATF+ I
Sbjct: 350 AAAMATAKGWSSLIVPGILVGMFGISIATFVGI 382


>tr|Q5VS59|Q5VS59_ORYSJ cDNA clone:J013161L13, full insert sequence
           OS=Oryza sativa subsp. japonica GN=P0644B06.44-1 PE=2
           SV=1
          Length = 441

 Score = 55.1 bits (131), Expect = 2e-06
 Identities = 24/33 (72%), Positives = 29/33 (87%)
 Frame = +2

Query: 2   AAGLATAKGWKSLIVPGILAGIFGVAIATFISI 100
           AA +ATAKGW SLIVPGIL G+FG++IATF+ I
Sbjct: 396 AAAMATAKGWSSLIVPGILVGMFGISIATFVGI 428


>tr|A9SIN5|A9SIN5_PHYPA Predicted protein (Fragment)
           OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_43710 PE=4 SV=1
          Length = 374

 Score = 55.1 bits (131), Expect = 2e-06
 Identities = 24/33 (72%), Positives = 29/33 (87%)
 Frame = +2

Query: 2   AAGLATAKGWKSLIVPGILAGIFGVAIATFISI 100
           A G+ATAKGW+SL+VP IL GIFG+AIATF+ I
Sbjct: 332 AGGMATAKGWRSLLVPSILIGIFGIAIATFLGI 364


>tr|A3B7L7|A3B7L7_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_019039 PE=4 SV=1
          Length = 694

 Score = 55.1 bits (131), Expect = 2e-06
 Identities = 24/33 (72%), Positives = 29/33 (87%)
 Frame = +2

Query: 2   AAGLATAKGWKSLIVPGILAGIFGVAIATFISI 100
           AA +ATAKGW SLIVPGIL G+FG++IATF+ I
Sbjct: 529 AAAMATAKGWSSLIVPGILVGMFGISIATFVGI 561


>tr|Q9FLW1|Q9FLW1_ARATH Similarity to unknown protein OS=Arabidopsis
           thaliana GN=At5g24000 PE=4 SV=1
          Length = 443

 Score = 53.9 bits (128), Expect = 4e-06
 Identities = 23/33 (69%), Positives = 29/33 (87%)
 Frame = +2

Query: 2   AAGLATAKGWKSLIVPGILAGIFGVAIATFISI 100
           A  +ATAKGW SL+VPGIL+G+FGV+IATF+ I
Sbjct: 401 ACAMATAKGWTSLVVPGILSGVFGVSIATFLGI 433